RNA–Protein interactions for RNA: ENST00000319854.7

SHROOM1-201, Transcript of shroom family member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHROOM1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-201ENST00000319854 FASTKD3Q14CZ7 662 aaKnown RBP16.27■□□□□ 0.2
SHROOM1-201ENST00000319854 PDCD2Q16342 344 aaPredicted RBP16.27■□□□□ 0.2
SHROOM1-201ENST00000319854 ZC3H12AQ5D1E8 599 aaKnown RBP16.27■□□□□ 0.2
SHROOM1-201ENST00000319854 WASHC2DQ5SRD0 308 aa16.27■□□□□ 0.2
SHROOM1-201ENST00000319854 SCG3Q8WXD2 468 aaKnown RBP16.27■□□□□ 0.2
SHROOM1-201ENST00000319854 GRAMD1AQ96CP6 724 aa16.27■□□□□ 0.2
SHROOM1-201ENST00000319854 CPXM1Q96SM3 734 aa16.27■□□□□ 0.2
SHROOM1-201ENST00000319854 CXCL16Q9H2A7 254 aa16.27■□□□□ 0.2
SHROOM1-201ENST00000319854 OCEL1Q9H607 264 aa16.27■□□□□ 0.2
SHROOM1-201ENST00000319854 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.27■□□□□ 0.19
SHROOM1-201ENST00000319854 ASMTLO95671 621 aa16.27■□□□□ 0.19
SHROOM1-201ENST00000319854 KRT3P12035 628 aa16.27■□□□□ 0.19
SHROOM1-201ENST00000319854 ITIH2P19823 946 aa16.27■□□□□ 0.19
SHROOM1-201ENST00000319854 POLR2BP30876 1174 aaKnown RBP16.27■□□□□ 0.19
SHROOM1-201ENST00000319854 KLF1Q13351 362 aaPredicted RBP16.27■□□□□ 0.19
SHROOM1-201ENST00000319854 RAB6CQ53S08 254 aa16.27■□□□□ 0.19
SHROOM1-201ENST00000319854 SNX30Q5VWJ9 437 aa16.27■□□□□ 0.19
SHROOM1-201ENST00000319854 C12orf50Q8NA57 414 aaPredicted RBP16.27■□□□□ 0.19
SHROOM1-201ENST00000319854 LRRC8CQ8TDW0 803 aa16.27■□□□□ 0.19
SHROOM1-201ENST00000319854 ITFG2Q969R8 447 aa16.27■□□□□ 0.19
SHROOM1-201ENST00000319854 HEXIM2Q96MH2 286 aaKnown RBP16.27■□□□□ 0.19
SHROOM1-201ENST00000319854 DDX50Q9BQ39 737 aaKnown RBP16.27■□□□□ 0.19
SHROOM1-201ENST00000319854 RAB6CQ9H0N0 254 aa16.27■□□□□ 0.19
SHROOM1-201ENST00000319854 SAYSD1Q9NPB0 183 aa16.27■□□□□ 0.19
SHROOM1-201ENST00000319854 SIX4Q9UIU6 781 aa16.27■□□□□ 0.19
SHROOM1-201ENST00000319854 STARD13Q9Y3M8 1113 aa16.27■□□□□ 0.19
SHROOM1-201ENST00000319854 RASA4BC9J798 803 aa16.26■□□□□ 0.19
SHROOM1-201ENST00000319854 POC1B-GALNT4F8VUJ3 575 aa16.26■□□□□ 0.19
SHROOM1-201ENST00000319854 RASA4O43374 803 aa16.26■□□□□ 0.19
SHROOM1-201ENST00000319854 PSTPIP1O43586 416 aa16.26■□□□□ 0.19
SHROOM1-201ENST00000319854 ATP5HO75947 161 aa16.26■□□□□ 0.19
SHROOM1-201ENST00000319854 GJA5P36382 358 aa16.26■□□□□ 0.19
SHROOM1-201ENST00000319854 CETN2P41208 172 aa16.26■□□□□ 0.19
SHROOM1-201ENST00000319854 RGS7P49802 495 aa16.26■□□□□ 0.19
SHROOM1-201ENST00000319854 MBTD1Q05BQ5 628 aa16.26■□□□□ 0.19
SHROOM1-201ENST00000319854 AMHR2Q16671 573 aa16.26■□□□□ 0.19
SHROOM1-201ENST00000319854 IRGCQ6NXR0 463 aa16.26■□□□□ 0.19
SHROOM1-201ENST00000319854 GRK7Q8WTQ7 553 aa16.26■□□□□ 0.19
SHROOM1-201ENST00000319854 SLITRK1Q96PX8 696 aa16.26■□□□□ 0.19
SHROOM1-201ENST00000319854 RBM15Q96T37 977 aaKnown RBP eCLIP16.26■□□□□ 0.197e-7■■■□□ 17.3
SHROOM1-201ENST00000319854 APOL6Q9BWW8 343 aa16.26■□□□□ 0.19
SHROOM1-201ENST00000319854 CALN1Q9BXU9 219 aa16.26■□□□□ 0.19
SHROOM1-201ENST00000319854 DCLRE1BQ9H816 532 aa16.26■□□□□ 0.19
SHROOM1-201ENST00000319854 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.26■□□□□ 0.192e-6■■■□□ 16.1
SHROOM1-201ENST00000319854 HES2Q9Y543 173 aa16.26■□□□□ 0.19
SHROOM1-201ENST00000319854 KRT36O76013 467 aa16.26■□□□□ 0.19
SHROOM1-201ENST00000319854 SLC25A27O95847 323 aa16.26■□□□□ 0.19
SHROOM1-201ENST00000319854 OSBPP22059 807 aa16.26■□□□□ 0.19
SHROOM1-201ENST00000319854 ZNF132P52740 706 aa16.26■□□□□ 0.19
SHROOM1-201ENST00000319854 GAD2Q05329 585 aa16.26■□□□□ 0.19
SHROOM1-201ENST00000319854 TFDP1Q14186 410 aa16.26■□□□□ 0.19
SHROOM1-201ENST00000319854 TMED2Q15363 201 aa16.26■□□□□ 0.19
SHROOM1-201ENST00000319854 SH3PXD2AQ5TCZ1 1133 aa16.26■□□□□ 0.19
SHROOM1-201ENST00000319854 CCDC62Q6P9F0 684 aa16.26■□□□□ 0.19
SHROOM1-201ENST00000319854 C4orf50Q6ZRC1 276 aa16.26■□□□□ 0.19
SHROOM1-201ENST00000319854 KATNAL2Q8IYT4 538 aa16.26■□□□□ 0.19
SHROOM1-201ENST00000319854 C12orf29Q8N999 325 aa16.26■□□□□ 0.19
SHROOM1-201ENST00000319854 UBE2OQ9C0C9 1292 aaKnown RBP16.26■□□□□ 0.19
SHROOM1-201ENST00000319854 WHRNQ9P202 907 aa16.26■□□□□ 0.19
SHROOM1-201ENST00000319854 M0QYV0 167 aa16.26■□□□□ 0.19
SHROOM1-201ENST00000319854 CALB1P05937 261 aa16.26■□□□□ 0.19
SHROOM1-201ENST00000319854 IL9RQ01113 521 aa16.26■□□□□ 0.19
SHROOM1-201ENST00000319854 PTK6Q13882 451 aa16.26■□□□□ 0.19
SHROOM1-201ENST00000319854 KIZQ2M2Z5 673 aa16.26■□□□□ 0.19
SHROOM1-201ENST00000319854 PLEKHG4Q58EX7 1191 aa16.26■□□□□ 0.19
SHROOM1-201ENST00000319854 GLRA4Q5JXX5 417 aa16.26■□□□□ 0.19
SHROOM1-201ENST00000319854 ANKMY2Q8IV38 441 aa16.26■□□□□ 0.19
SHROOM1-201ENST00000319854 EXD1Q8NHP7 514 aa16.26■□□□□ 0.19
SHROOM1-201ENST00000319854 DTX3LQ8TDB6 740 aa16.26■□□□□ 0.19
SHROOM1-201ENST00000319854 C10orf82Q8WW14 230 aa16.26■□□□□ 0.19
SHROOM1-201ENST00000319854 TRAIPQ9BWF2 469 aa16.26■□□□□ 0.19
SHROOM1-201ENST00000319854 CADM1Q9BY67 442 aaKnown RBP16.26■□□□□ 0.19
SHROOM1-201ENST00000319854 ERAP1Q9NZ08 941 aa16.26■□□□□ 0.19
SHROOM1-201ENST00000319854 LGALS2P05162 132 aa16.25■□□□□ 0.19
SHROOM1-201ENST00000319854 IL1R2P27930 398 aa16.25■□□□□ 0.19
SHROOM1-201ENST00000319854 ADORA2AP29274 412 aa16.25■□□□□ 0.19
SHROOM1-201ENST00000319854 USP4Q13107 963 aa16.25■□□□□ 0.19
SHROOM1-201ENST00000319854 RCN1Q15293 331 aa16.25■□□□□ 0.19
SHROOM1-201ENST00000319854 SPOCD1Q6ZMY3 1216 aa16.25■□□□□ 0.19
SHROOM1-201ENST00000319854 KIAA0319LQ8IZA0 1049 aa16.25■□□□□ 0.19
SHROOM1-201ENST00000319854 SLC10A4Q96EP9 437 aa16.25■□□□□ 0.19
SHROOM1-201ENST00000319854 IFT122Q9HBG6 1241 aa16.25■□□□□ 0.19
SHROOM1-201ENST00000319854 FAM47DPA6NHR8 397 aa16.25■□□□□ 0.19
SHROOM1-201ENST00000319854 HBP1O60381 514 aa16.25■□□□□ 0.19
SHROOM1-201ENST00000319854 RANBP1P43487 201 aa16.25■□□□□ 0.19
SHROOM1-201ENST00000319854 CACNA2D1P54289 1103 aa16.25■□□□□ 0.19
SHROOM1-201ENST00000319854 MCCD1P59942 119 aaPredicted RBP16.25■□□□□ 0.19
SHROOM1-201ENST00000319854 CCNG2Q16589 344 aa16.25■□□□□ 0.19
SHROOM1-201ENST00000319854 ACSBG2Q5FVE4 666 aa16.25■□□□□ 0.19
SHROOM1-201ENST00000319854 TSHZ1Q6ZSZ6 1077 aa16.25■□□□□ 0.19
SHROOM1-201ENST00000319854 ZC3H18Q86VM9 953 aaKnown RBP16.25■□□□□ 0.19
SHROOM1-201ENST00000319854 CCDC33Q8N5R6 958 aa16.25■□□□□ 0.19
SHROOM1-201ENST00000319854 CCDC89Q8N998 374 aa16.25■□□□□ 0.19
SHROOM1-201ENST00000319854 MAIP1Q8WWC4 291 aa16.25■□□□□ 0.19
SHROOM1-201ENST00000319854 MAML1Q92585 1016 aa16.25■□□□□ 0.19
SHROOM1-201ENST00000319854 LPIN3Q9BQK8 851 aa16.25■□□□□ 0.19
SHROOM1-201ENST00000319854 C2orf40Q9H1Z8 148 aa16.25■□□□□ 0.19
SHROOM1-201ENST00000319854 EURLQ9NYK6 297 aa16.25■□□□□ 0.19
SHROOM1-201ENST00000319854 LGALS13Q9UHV8 139 aa16.25■□□□□ 0.19
SHROOM1-201ENST00000319854 G3BP2Q9UN86 482 aaKnown RBP16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms