RNA–Protein interactions for RNA: ENST00000316448.9

CALR-201, Transcript of calreticulin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CALR, Length 1,903 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALR-201ENST00000316448 LCP1P13796 627 aa16.53■□□□□ 0.24
CALR-201ENST00000316448 IL1R2P27930 398 aa16.53■□□□□ 0.24
CALR-201ENST00000316448 CHRNA3P32297 505 aa16.53■□□□□ 0.24
CALR-201ENST00000316448 GJC1P36383 396 aa16.53■□□□□ 0.24
CALR-201ENST00000316448 SSR1P43307 286 aaKnown RBP16.53■□□□□ 0.24
CALR-201ENST00000316448 SLC6A3Q01959 620 aa16.53■□□□□ 0.24
CALR-201ENST00000316448 GABPB1Q06547 395 aaPredicted RBP16.53■□□□□ 0.24
CALR-201ENST00000316448 PIGHQ14442 188 aaPredicted RBP16.53■□□□□ 0.24
CALR-201ENST00000316448 FAM171BQ6P995 826 aa16.53■□□□□ 0.24
CALR-201ENST00000316448 RHOT1Q8IXI2 618 aa16.53■□□□□ 0.24
CALR-201ENST00000316448 MREGQ8N565 214 aa16.53■□□□□ 0.24
CALR-201ENST00000316448 C12orf50Q8NA57 414 aaPredicted RBP16.53■□□□□ 0.24
CALR-201ENST00000316448 ANKLE1Q8NAG6 615 aa16.53■□□□□ 0.24
CALR-201ENST00000316448 MYCBPAPQ8TBZ2 947 aa16.53■□□□□ 0.24
CALR-201ENST00000316448 RXFP2Q8WXD0 754 aa16.53■□□□□ 0.24
CALR-201ENST00000316448 IFT81Q8WYA0 676 aa16.53■□□□□ 0.24
CALR-201ENST00000316448 TRIM43Q96BQ3 446 aaPredicted RBP16.53■□□□□ 0.24
CALR-201ENST00000316448 MED10Q9BTT4 135 aa16.53■□□□□ 0.24
CALR-201ENST00000316448 MED4Q9NPJ6 270 aa16.53■□□□□ 0.24
CALR-201ENST00000316448 KLHL11Q9NVR0 708 aa16.53■□□□□ 0.24
CALR-201ENST00000316448 PCYOX1Q9UHG3 505 aa16.53■□□□□ 0.24
CALR-201ENST00000316448 TMEM189-UBE2V1I3L0A0 370 aa16.53■□□□□ 0.24
CALR-201ENST00000316448 NRP1O14786 923 aa16.53■□□□□ 0.24
CALR-201ENST00000316448 XPO1O14980 1071 aaKnown RBP16.53■□□□□ 0.24
CALR-201ENST00000316448 LRCH4O75427 683 aa16.53■□□□□ 0.24
CALR-201ENST00000316448 CLTBP09497 229 aa16.53■□□□□ 0.24
CALR-201ENST00000316448 FAM153BP0C7A2 387 aa16.53■□□□□ 0.24
CALR-201ENST00000316448 NDUFV1P49821 464 aa16.53■□□□□ 0.24
CALR-201ENST00000316448 BCAR1P56945 870 aa16.53■□□□□ 0.24
CALR-201ENST00000316448 DR1Q01658 176 aa16.53■□□□□ 0.24
CALR-201ENST00000316448 PLCB3Q01970 1234 aa16.53■□□□□ 0.24
CALR-201ENST00000316448 FAM153CQ494X1 144 aa16.53■□□□□ 0.24
CALR-201ENST00000316448 FAM35AQ86V20 835 aa16.53■□□□□ 0.24
CALR-201ENST00000316448 FNIP1Q8TF40 1166 aa16.53■□□□□ 0.24
CALR-201ENST00000316448 ACSF2Q96CM8 615 aaPredicted RBP16.53■□□□□ 0.24
CALR-201ENST00000316448 KCNK16Q96T55 309 aa16.53■□□□□ 0.24
CALR-201ENST00000316448 ACBD6Q9BR61 282 aa16.53■□□□□ 0.24
CALR-201ENST00000316448 FAM153AQ9UHL3 310 aa16.53■□□□□ 0.24
CALR-201ENST00000316448 LRFN2Q9ULH4 789 aa16.53■□□□□ 0.24
CALR-201ENST00000316448 PCDHB8Q9UN66 801 aa16.53■□□□□ 0.24
CALR-201ENST00000316448 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.53■□□□□ 0.24
CALR-201ENST00000316448 FAM187AA6NFU0 413 aa16.52■□□□□ 0.23
CALR-201ENST00000316448 FSCN2O14926 492 aa16.52■□□□□ 0.23
CALR-201ENST00000316448 NPR3P17342 541 aa16.52■□□□□ 0.23
CALR-201ENST00000316448 PBX3P40426 434 aa16.52■□□□□ 0.23
CALR-201ENST00000316448 SLC11A1P49279 550 aa16.52■□□□□ 0.23
CALR-201ENST00000316448 CTCFP49711 727 aaPredicted RBP16.52■□□□□ 0.23
CALR-201ENST00000316448 MAP3K7CLP57077 242 aa16.52■□□□□ 0.23
CALR-201ENST00000316448 ADCY1Q08828 1119 aa16.52■□□□□ 0.23
CALR-201ENST00000316448 C15orf59Q2T9L4 293 aaPredicted RBP16.52■□□□□ 0.23
CALR-201ENST00000316448 INTS6LQ5JSJ4 861 aaKnown RBP16.52■□□□□ 0.23
CALR-201ENST00000316448 OVOS1Q6IE37 1185 aa16.52■□□□□ 0.23
CALR-201ENST00000316448 METTL23Q86XA0 190 aa16.52■□□□□ 0.23
CALR-201ENST00000316448 NPAS4Q8IUM7 802 aa16.52■□□□□ 0.23
CALR-201ENST00000316448 KATNAL2Q8IYT4 538 aa16.52■□□□□ 0.23
CALR-201ENST00000316448 ABI1Q8IZP0 508 aa16.52■□□□□ 0.23
CALR-201ENST00000316448 TSEN2Q8NCE0 465 aaKnown RBP16.52■□□□□ 0.23
CALR-201ENST00000316448 MYLPFQ96A32 169 aa16.52■□□□□ 0.23
CALR-201ENST00000316448 HSFY1Q96LI6 401 aa16.52■□□□□ 0.23
CALR-201ENST00000316448 FAM193BQ96PV7 902 aaPredicted RBP16.52■□□□□ 0.23
CALR-201ENST00000316448 ADAM33Q9BZ11 813 aa16.52■□□□□ 0.23
CALR-201ENST00000316448 RAB17Q9H0T7 212 aa16.52■□□□□ 0.23
CALR-201ENST00000316448 KRT82Q9NSB4 513 aa16.52■□□□□ 0.23
CALR-201ENST00000316448 MARCH5Q9NX47 278 aa16.52■□□□□ 0.23
CALR-201ENST00000316448 MTUS1Q9ULD2 1270 aa16.52■□□□□ 0.23
CALR-201ENST00000316448 TBKBP1A7MCY6 615 aa16.51■□□□□ 0.23
CALR-201ENST00000316448 NT5C1B-RDH14C9J2C7 533 aa16.51■□□□□ 0.23
CALR-201ENST00000316448 PI4K2BG5E9Z4 385 aa16.51■□□□□ 0.23
CALR-201ENST00000316448 UPP2O95045 317 aa16.51■□□□□ 0.23
CALR-201ENST00000316448 RARAP10276 462 aa16.51■□□□□ 0.23
CALR-201ENST00000316448 TFE3P19532 575 aaPredicted RBP16.51■□□□□ 0.23
CALR-201ENST00000316448 TYMPP19971 482 aa16.51■□□□□ 0.23
CALR-201ENST00000316448 PCSK1P29120 753 aa16.51■□□□□ 0.23
CALR-201ENST00000316448 SLC25A11Q02978 314 aaKnown RBP16.51■□□□□ 0.23
CALR-201ENST00000316448 CCDC14Q49A88 953 aa16.51■□□□□ 0.23
CALR-201ENST00000316448 TTC27Q6P3X3 843 aa16.51■□□□□ 0.23
CALR-201ENST00000316448 GPRIN1Q7Z2K8 1008 aa16.51■□□□□ 0.23
CALR-201ENST00000316448 TMCO2Q7Z6W1 182 aaPredicted RBP16.51■□□□□ 0.23
CALR-201ENST00000316448 TMEM173Q86WV6 379 aaPredicted RBP16.51■□□□□ 0.23
CALR-201ENST00000316448 UTP11Q9Y3A2 253 aaKnown RBP16.51■□□□□ 0.23
CALR-201ENST00000316448 HHLA1C9JL84 531 aa16.51■□□□□ 0.23
CALR-201ENST00000316448 AGPSO00116 658 aa16.51■□□□□ 0.23
CALR-201ENST00000316448 AP1G2O75843 785 aa16.51■□□□□ 0.23
CALR-201ENST00000316448 PARNO95453 639 aaKnown RBP16.51■□□□□ 0.23
CALR-201ENST00000316448 OR4Q2P0C623 313 aa16.51■□□□□ 0.23
CALR-201ENST00000316448 PDGFRAP16234 1089 aa16.51■□□□□ 0.23
CALR-201ENST00000316448 GPD1P21695 349 aa16.51■□□□□ 0.23
CALR-201ENST00000316448 PAX3P23760 479 aa16.51■□□□□ 0.23
CALR-201ENST00000316448 PTGIRP43119 386 aa16.51■□□□□ 0.23
CALR-201ENST00000316448 FNTAP49354 379 aa16.51■□□□□ 0.23
CALR-201ENST00000316448 ZNF143P52747 638 aaPredicted RBP16.51■□□□□ 0.23
CALR-201ENST00000316448 ADCY2Q08462 1091 aa16.51■□□□□ 0.23
CALR-201ENST00000316448 DUPD1Q68J44 220 aa16.51■□□□□ 0.23
CALR-201ENST00000316448 JAMLQ86YT9 394 aa16.51■□□□□ 0.23
CALR-201ENST00000316448 FAM71BQ8TC56 605 aa16.51■□□□□ 0.23
CALR-201ENST00000316448 SPATA18Q8TC71 538 aa16.51■□□□□ 0.23
CALR-201ENST00000316448 BCL7CQ8WUZ0 217 aaPredicted RBP16.51■□□□□ 0.23
CALR-201ENST00000316448 RAPGEF5Q92565 580 aa16.51■□□□□ 0.23
CALR-201ENST00000316448 RNF25Q96BH1 459 aaPredicted RBP16.51■□□□□ 0.23
CALR-201ENST00000316448 B3GALT6Q96L58 329 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms