RNA–Protein interactions for RNA: ENST00000315962.8

TRIM55-202, Transcript of tripartite motif containing 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM55, Length 2,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-202ENST00000315962 NAIF1Q69YI7 327 aaPredicted RBP7.98□□□□□ -1.13
TRIM55-202ENST00000315962 RPAINQ86UA6 219 aa7.98□□□□□ -1.13
TRIM55-202ENST00000315962 ZNF410Q86VK4 478 aa7.98□□□□□ -1.13
TRIM55-202ENST00000315962 HOOK3Q86VS8 718 aa7.98□□□□□ -1.13
TRIM55-202ENST00000315962 ANKS4BQ8N8V4 417 aa7.98□□□□□ -1.13
TRIM55-202ENST00000315962 SMG8Q8ND04 991 aaKnown RBP7.98□□□□□ -1.13
TRIM55-202ENST00000315962 RMDN2Q96LZ7 410 aa7.98□□□□□ -1.13
TRIM55-202ENST00000315962 TMEM237Q96Q45 408 aa7.98□□□□□ -1.13
TRIM55-202ENST00000315962 TMEM121Q9BTD3 319 aa7.98□□□□□ -1.13
TRIM55-202ENST00000315962 NT5C1AQ9BXI3 368 aa7.98□□□□□ -1.13
TRIM55-202ENST00000315962 BCO2Q9BYV7 579 aa7.98□□□□□ -1.13
TRIM55-202ENST00000315962 RAB17Q9H0T7 212 aa7.98□□□□□ -1.13
TRIM55-202ENST00000315962 NOD1Q9Y239 953 aa7.98□□□□□ -1.13
TRIM55-202ENST00000315962 SBDSQ9Y3A5 250 aaKnown RBP eCLIP7.98□□□□□ -1.13
TRIM55-202ENST00000315962 PPME1Q9Y570 386 aa7.98□□□□□ -1.13
TRIM55-202ENST00000315962 NR2E3Q9Y5X4 410 aa7.98□□□□□ -1.13
TRIM55-202ENST00000315962 TLL2Q9Y6L7 1015 aa7.98□□□□□ -1.13
TRIM55-202ENST00000315962 PLXNB2O15031 1838 aa7.98□□□□□ -1.13
TRIM55-202ENST00000315962 SMIM35A0A1B0GVV1 85 aa7.98□□□□□ -1.13
TRIM55-202ENST00000315962 C5orf60A6NFR6 353 aa7.98□□□□□ -1.13
TRIM55-202ENST00000315962 TMEM88BA6NKF7 163 aa7.98□□□□□ -1.13
TRIM55-202ENST00000315962 H0Y3Z8 333 aa7.98□□□□□ -1.13
TRIM55-202ENST00000315962 RASGRF2O14827 1237 aa7.98□□□□□ -1.13
TRIM55-202ENST00000315962 ANP32DO95626 131 aa7.98□□□□□ -1.13
TRIM55-202ENST00000315962 HOXD8P13378 290 aaPredicted RBP7.98□□□□□ -1.13
TRIM55-202ENST00000315962 CD52P31358 61 aa7.98□□□□□ -1.13
TRIM55-202ENST00000315962 COILP38432 576 aaPredicted RBP7.98□□□□□ -1.13
TRIM55-202ENST00000315962 GRM5P41594 1212 aa7.98□□□□□ -1.13
TRIM55-202ENST00000315962 FCGRTP55899 365 aa7.98□□□□□ -1.13
TRIM55-202ENST00000315962 ADAM17P78536 824 aa7.98□□□□□ -1.13
TRIM55-202ENST00000315962 XRCC4Q13426 336 aa7.98□□□□□ -1.13
TRIM55-202ENST00000315962 AUHQ13825 339 aaKnown RBP7.98□□□□□ -1.13
TRIM55-202ENST00000315962 MPP2Q14168 576 aa7.98□□□□□ -1.13
TRIM55-202ENST00000315962 KYNUQ16719 465 aa7.98□□□□□ -1.13
TRIM55-202ENST00000315962 EMC10Q5UCC4 262 aa7.98□□□□□ -1.13
TRIM55-202ENST00000315962 C9orf57Q5W0N0 161 aa7.98□□□□□ -1.13
TRIM55-202ENST00000315962 TRNP1Q6NT89 227 aa7.98□□□□□ -1.13
TRIM55-202ENST00000315962 EXOC3L1Q86VI1 746 aa7.98□□□□□ -1.13
TRIM55-202ENST00000315962 TTC30AQ86WT1 665 aa7.98□□□□□ -1.13
TRIM55-202ENST00000315962 RHOT1Q8IXI2 618 aa7.98□□□□□ -1.13
TRIM55-202ENST00000315962 SNX27Q96L92 541 aa7.98□□□□□ -1.13
TRIM55-202ENST00000315962 RHOBTB2Q9BYZ6 727 aa7.98□□□□□ -1.13
TRIM55-202ENST00000315962 OSBPL8Q9BZF1 889 aa7.98□□□□□ -1.13
TRIM55-202ENST00000315962 NGRNQ9NPE2 291 aaKnown RBP7.98□□□□□ -1.13
TRIM55-202ENST00000315962 MIOSQ9NXC5 875 aa7.98□□□□□ -1.13
TRIM55-202ENST00000315962 DONSONQ9NYP3 566 aa7.98□□□□□ -1.13
TRIM55-202ENST00000315962 MTUS1Q9ULD2 1270 aa7.98□□□□□ -1.13
TRIM55-202ENST00000315962 BARX2Q9UMQ3 279 aaPredicted RBP7.98□□□□□ -1.13
TRIM55-202ENST00000315962 LRRC37A2A6NM11 1700 aa7.97□□□□□ -1.13
TRIM55-202ENST00000315962 DCAF8L1A6NGE4 600 aa7.97□□□□□ -1.13
TRIM55-202ENST00000315962 KPNA7A9QM74 516 aa7.97□□□□□ -1.13
TRIM55-202ENST00000315962 F5H423 210 aaPredicted RBP7.97□□□□□ -1.13
TRIM55-202ENST00000315962 PHF2O75151 1096 aa7.97□□□□□ -1.13
TRIM55-202ENST00000315962 SPAG7O75391 227 aa7.97□□□□□ -1.13
TRIM55-202ENST00000315962 BEST1O76090 585 aa7.97□□□□□ -1.13
TRIM55-202ENST00000315962 ADCY8P40145 1251 aa7.97□□□□□ -1.13
TRIM55-202ENST00000315962 NUMBP49757 651 aa7.97□□□□□ -1.13
TRIM55-202ENST00000315962 HADHBP55084 474 aaKnown RBP7.97□□□□□ -1.13
TRIM55-202ENST00000315962 C1QBPQ07021 282 aaKnown RBP7.97□□□□□ -1.13
TRIM55-202ENST00000315962 FBXO47Q5MNV8 452 aa7.97□□□□□ -1.13
TRIM55-202ENST00000315962 UBXN11Q5T124 520 aa7.97□□□□□ -1.13
TRIM55-202ENST00000315962 XYLT1Q86Y38 959 aa7.97□□□□□ -1.13
TRIM55-202ENST00000315962 EGFL6Q8IUX8 553 aa7.97□□□□□ -1.13
TRIM55-202ENST00000315962 SRRM1Q8IYB3 904 aaKnown RBP7.97□□□□□ -1.13
TRIM55-202ENST00000315962 CYP4X1Q8N118 509 aa7.97□□□□□ -1.13
TRIM55-202ENST00000315962 STKLD1Q8NE28 680 aa7.97□□□□□ -1.13
TRIM55-202ENST00000315962 CD99L2Q8TCZ2 262 aa7.97□□□□□ -1.13
TRIM55-202ENST00000315962 SLC2A14Q8TDB8 520 aa7.97□□□□□ -1.13
TRIM55-202ENST00000315962 C9orf72Q96LT7 481 aa7.97□□□□□ -1.13
TRIM55-202ENST00000315962 NAP1L3Q99457 506 aaPredicted RBP7.97□□□□□ -1.13
TRIM55-202ENST00000315962 CDC42EP4Q9H3Q1 356 aaKnown RBP7.97□□□□□ -1.13
TRIM55-202ENST00000315962 TMPRSS4Q9NRS4 437 aa7.97□□□□□ -1.13
TRIM55-202ENST00000315962 DNPEPQ9ULA0 475 aa7.97□□□□□ -1.13
TRIM55-202ENST00000315962 ZNF148Q9UQR1 794 aa7.97□□□□□ -1.13
TRIM55-202ENST00000315962 RIPK2O43353 540 aa7.97□□□□□ -1.13
TRIM55-202ENST00000315962 MGRN1O60291 552 aa7.97□□□□□ -1.13
TRIM55-202ENST00000315962 LRCH4O75427 683 aa7.97□□□□□ -1.13
TRIM55-202ENST00000315962 GABBR2O75899 941 aa7.97□□□□□ -1.13
TRIM55-202ENST00000315962 MTA2O94776 668 aa7.97□□□□□ -1.13
TRIM55-202ENST00000315962 PDGFRAP16234 1089 aa7.97□□□□□ -1.13
TRIM55-202ENST00000315962 GNL1P36915 607 aaPredicted RBP7.97□□□□□ -1.13
TRIM55-202ENST00000315962 PTGIRP43119 386 aa7.97□□□□□ -1.13
TRIM55-202ENST00000315962 MMP13P45452 471 aa7.97□□□□□ -1.13
TRIM55-202ENST00000315962 SCNN1GP51170 649 aa7.97□□□□□ -1.13
TRIM55-202ENST00000315962 CLCNKBP51801 687 aa7.97□□□□□ -1.13
TRIM55-202ENST00000315962 NCALDP61601 193 aa7.97□□□□□ -1.13
TRIM55-202ENST00000315962 YWHAEP62258 255 aaKnown RBP7.97□□□□□ -1.13
TRIM55-202ENST00000315962 SREBF2Q12772 1141 aa7.97□□□□□ -1.13
TRIM55-202ENST00000315962 IFRD2Q12894 506 aaPredicted RBP7.97□□□□□ -1.13
TRIM55-202ENST00000315962 PPP6R3Q5H9R7 873 aaPredicted RBP7.97□□□□□ -1.13
TRIM55-202ENST00000315962 WLSQ5T9L3 541 aa7.97□□□□□ -1.13
TRIM55-202ENST00000315962 MFSD14CQ5VZR4 134 aa7.97□□□□□ -1.13
TRIM55-202ENST00000315962 WSCD1Q658N2 575 aa7.97□□□□□ -1.13
TRIM55-202ENST00000315962 ZC3H18Q86VM9 953 aaKnown RBP7.97□□□□□ -1.13
TRIM55-202ENST00000315962 MICAL1Q8TDZ2 1067 aa7.97□□□□□ -1.13
TRIM55-202ENST00000315962 ARHGEF2Q92974 986 aaKnown RBP7.97□□□□□ -1.13
TRIM55-202ENST00000315962 KLHL29Q96CT2 875 aa7.97□□□□□ -1.13
TRIM55-202ENST00000315962 FAM81BQ96LP2 452 aa7.97□□□□□ -1.13
TRIM55-202ENST00000315962 TXLNGYQ9BZA5 131 aa7.97□□□□□ -1.13
TRIM55-202ENST00000315962 TRPV6Q9H1D0 765 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 102.5 ms