RNA–Protein interactions for RNA: ENST00000314191.6

PRKDC-201, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKDC, Length 13,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-201ENST00000314191 TRAPPC3O43617 180 aa6.44□□□□□ -1.38
PRKDC-201ENST00000314191 ARIH2O95376 493 aa6.44□□□□□ -1.38
PRKDC-201ENST00000314191 VNN1O95497 513 aa6.44□□□□□ -1.38
PRKDC-201ENST00000314191 CHRNB2P17787 502 aa6.44□□□□□ -1.38
PRKDC-201ENST00000314191 MICAL1Q8TDZ2 1067 aa6.44□□□□□ -1.38
PRKDC-201ENST00000314191 IFT43Q96FT9 208 aa6.44□□□□□ -1.38
PRKDC-201ENST00000314191 XPNPEP3Q9NQH7 507 aa6.44□□□□□ -1.38
PRKDC-201ENST00000314191 APOBEC2Q9Y235 224 aaKnown RBP6.44□□□□□ -1.38
PRKDC-201ENST00000314191 SETSIPP0DME0 302 aa6.44□□□□□ -1.38
PRKDC-201ENST00000314191 CCDC130P13994 396 aa6.44□□□□□ -1.38
PRKDC-201ENST00000314191 ELK3P41970 407 aa6.44□□□□□ -1.38
PRKDC-201ENST00000314191 ZNF410Q86VK4 478 aa6.44□□□□□ -1.38
PRKDC-201ENST00000314191 KATNAL2Q8IYT4 538 aa6.44□□□□□ -1.38
PRKDC-201ENST00000314191 IQCKQ8N0W5 287 aa6.44□□□□□ -1.38
PRKDC-201ENST00000314191 COPS2P61201 443 aa6.44□□□□□ -1.38
PRKDC-201ENST00000314191 PTK6Q13882 451 aa6.44□□□□□ -1.38
PRKDC-201ENST00000314191 RFX8Q6ZV50 586 aa6.44□□□□□ -1.38
PRKDC-201ENST00000314191 ARMC2Q8NEN0 867 aa6.44□□□□□ -1.38
PRKDC-201ENST00000314191 GAD1Q99259 594 aa6.44□□□□□ -1.38
PRKDC-201ENST00000314191 SLC38A7Q9NVC3 462 aa6.44□□□□□ -1.38
PRKDC-201ENST00000314191 MARCOQ9UEW3 520 aaPredicted RBP6.44□□□□□ -1.38
PRKDC-201ENST00000314191 MID2Q9UJV3 735 aa6.44□□□□□ -1.38
PRKDC-201ENST00000314191 UBA6A0AVT1 1052 aaPredicted RBP6.44□□□□□ -1.38
PRKDC-201ENST00000314191 RPL22P35268 128 aaKnown RBP6.44□□□□□ -1.38
PRKDC-201ENST00000314191 ARL2P36404 184 aa6.44□□□□□ -1.38
PRKDC-201ENST00000314191 RNF135Q8IUD6 432 aa6.44□□□□□ -1.38
PRKDC-201ENST00000314191 RIBC1Q8N443 379 aaPredicted RBP6.44□□□□□ -1.38
PRKDC-201ENST00000314191 NETO2Q8NC67 525 aa6.44□□□□□ -1.38
PRKDC-201ENST00000314191 TFB1MQ8WVM0 346 aaKnown RBP6.44□□□□□ -1.38
PRKDC-201ENST00000314191 PAFAH2Q99487 392 aa6.44□□□□□ -1.38
PRKDC-201ENST00000314191 CYP4F11Q9HBI6 524 aa6.44□□□□□ -1.38
PRKDC-201ENST00000314191 IPO11Q9UI26 975 aaKnown RBP6.44□□□□□ -1.38
PRKDC-201ENST00000314191 PHTF1Q9UMS5 762 aa6.44□□□□□ -1.38
PRKDC-201ENST00000314191 COL14A1Q05707 1796 aaKnown RBP6.43□□□□□ -1.38
PRKDC-201ENST00000314191 C11orf97A0A1B0GVM6 126 aaPredicted RBP6.43□□□□□ -1.38
PRKDC-201ENST00000314191 CHUKO15111 745 aa6.43□□□□□ -1.38
PRKDC-201ENST00000314191 YWHAZP63104 245 aaKnown RBP6.43□□□□□ -1.38
PRKDC-201ENST00000314191 MGAT5BQ3V5L5 792 aa6.43□□□□□ -1.38
PRKDC-201ENST00000314191 PTPN20Q4JDL3 420 aa6.43□□□□□ -1.38
PRKDC-201ENST00000314191 KIF2BQ8N4N8 673 aa6.43□□□□□ -1.38
PRKDC-201ENST00000314191 ZNF516Q92618 1163 aa6.43□□□□□ -1.38
PRKDC-201ENST00000314191 SEPT5Q99719 369 aaPredicted RBP6.43□□□□□ -1.38
PRKDC-201ENST00000314191 GPR25O00155 361 aa6.43□□□□□ -1.38
PRKDC-201ENST00000314191 KRT4P19013 534 aa6.43□□□□□ -1.38
PRKDC-201ENST00000314191 USP10Q14694 798 aaKnown RBP6.43□□□□□ -1.38
PRKDC-201ENST00000314191 HOMEZQ8IX15 550 aa6.43□□□□□ -1.38
PRKDC-201ENST00000314191 NIFKQ9BYG3 293 aaKnown RBP6.43□□□□□ -1.38
PRKDC-201ENST00000314191 PCDH9Q9HC56 1237 aa6.43□□□□□ -1.38
PRKDC-201ENST00000314191 KLC4Q9NSK0 619 aa6.43□□□□□ -1.38
PRKDC-201ENST00000314191 R3HDM2Q9Y2K5 976 aaKnown RBP6.43□□□□□ -1.38
PRKDC-201ENST00000314191 ARF4P18085 180 aaPredicted RBP6.43□□□□□ -1.38
PRKDC-201ENST00000314191 PHF13Q86YI8 300 aaPredicted RBP6.43□□□□□ -1.38
PRKDC-201ENST00000314191 ART4Q93070 314 aa6.43□□□□□ -1.38
PRKDC-201ENST00000314191 ZNF669Q96BR6 464 aaPredicted RBP6.43□□□□□ -1.38
PRKDC-201ENST00000314191 WDCPQ9H6R7 721 aa6.43□□□□□ -1.38
PRKDC-201ENST00000314191 MAP2K2P36507 400 aa6.43□□□□□ -1.38
PRKDC-201ENST00000314191 CORO7P57737 925 aa6.43□□□□□ -1.38
PRKDC-201ENST00000314191 ZC3H12AQ5D1E8 599 aaKnown RBP6.43□□□□□ -1.38
PRKDC-201ENST00000314191 SLC39A4Q6P5W5 647 aa6.43□□□□□ -1.38
PRKDC-201ENST00000314191 GLT1D1Q96MS3 346 aa6.43□□□□□ -1.38
PRKDC-201ENST00000314191 GOLGA2P5Q9HBQ8 144 aa6.43□□□□□ -1.38
PRKDC-201ENST00000314191 O00370 1275 aa6.43□□□□□ -1.38
PRKDC-201ENST00000314191 PIAS1O75925 651 aa6.43□□□□□ -1.38
PRKDC-201ENST00000314191 CYP2F1P24903 491 aa6.43□□□□□ -1.38
PRKDC-201ENST00000314191 SKOR1P84550 965 aa6.43□□□□□ -1.38
PRKDC-201ENST00000314191 AUHQ13825 339 aaKnown RBP6.43□□□□□ -1.38
PRKDC-201ENST00000314191 PCSK7Q16549 785 aa6.43□□□□□ -1.38
PRKDC-201ENST00000314191 SH3D19Q5HYK7 790 aa6.43□□□□□ -1.38
PRKDC-201ENST00000314191 IPMKQ8NFU5 416 aa6.43□□□□□ -1.38
PRKDC-201ENST00000314191 KCNV2Q8TDN2 545 aa6.43□□□□□ -1.38
PRKDC-201ENST00000314191 PGM2Q96G03 612 aa6.43□□□□□ -1.38
PRKDC-201ENST00000314191 ABI2Q9NYB9 513 aaPredicted RBP6.43□□□□□ -1.38
PRKDC-201ENST00000314191 GLTPD2A6NH11 291 aa6.43□□□□□ -1.38
PRKDC-201ENST00000314191 BANF1O75531 89 aa6.43□□□□□ -1.38
PRKDC-201ENST00000314191 DCP1BQ8IZD4 617 aaKnown RBP6.43□□□□□ -1.38
PRKDC-201ENST00000314191 ATP6V1E2Q96A05 226 aa6.43□□□□□ -1.38
PRKDC-201ENST00000314191 FRMD8P1Q9BZ68 369 aaPredicted RBP6.43□□□□□ -1.38
PRKDC-201ENST00000314191 ULBP1Q9BZM6 244 aa6.43□□□□□ -1.38
PRKDC-201ENST00000314191 KCNK1O00180 336 aa6.43□□□□□ -1.38
PRKDC-201ENST00000314191 GPR182O15218 404 aa6.43□□□□□ -1.38
PRKDC-201ENST00000314191 KCNA3P22001 575 aa6.43□□□□□ -1.38
PRKDC-201ENST00000314191 MORF4L2Q15014 288 aa6.43□□□□□ -1.38
PRKDC-201ENST00000314191 MMEL1Q495T6 779 aa6.43□□□□□ -1.38
PRKDC-201ENST00000314191 TUBB6Q9BUF5 446 aa6.43□□□□□ -1.38
PRKDC-201ENST00000314191 SMAPO00193 183 aa6.43□□□□□ -1.38
PRKDC-201ENST00000314191 ERMARDQ5T6L9 678 aa6.43□□□□□ -1.38
PRKDC-201ENST00000314191 LRRC6Q86X45 466 aa6.43□□□□□ -1.38
PRKDC-201ENST00000314191 SNRNP25Q9BV90 132 aaKnown RBP6.43□□□□□ -1.38
PRKDC-201ENST00000314191 NXF3Q9H4D5 531 aaKnown RBP6.43□□□□□ -1.38
PRKDC-201ENST00000314191 PCYOX1Q9UHG3 505 aa6.43□□□□□ -1.38
PRKDC-201ENST00000314191 SLC15A5A6NIM6 579 aa6.43□□□□□ -1.38
PRKDC-201ENST00000314191 AGPSO00116 658 aa6.43□□□□□ -1.38
PRKDC-201ENST00000314191 AKR1A1P14550 325 aa6.43□□□□□ -1.38
PRKDC-201ENST00000314191 MLH1P40692 756 aa6.43□□□□□ -1.38
PRKDC-201ENST00000314191 PRAMEP78395 509 aa6.43□□□□□ -1.38
PRKDC-201ENST00000314191 MIB1Q86YT6 1006 aa6.43□□□□□ -1.38
PRKDC-201ENST00000314191 ERP27Q96DN0 273 aa6.43□□□□□ -1.38
PRKDC-201ENST00000314191 FIZ1Q96SL8 496 aa6.43□□□□□ -1.38
PRKDC-201ENST00000314191 C3orf70A6NLC5 250 aaPredicted RBP6.43□□□□□ -1.38
PRKDC-201ENST00000314191 BRCC3P46736 316 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms