RNA–Protein interactions for RNA: ENST00000309422.6

VEGFB-201, Transcript of vascular endothelial growth factor B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFB, Length 1,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFB-201ENST00000309422 ANKRD52Q8NB46 1076 aa20.94■□□□□ 0.94
VEGFB-201ENST00000309422 TTC16Q8NEE8 873 aa20.94■□□□□ 0.94
VEGFB-201ENST00000309422 CSGALNACT1Q8TDX6 532 aa20.94■□□□□ 0.94
VEGFB-201ENST00000309422 VPS16Q9H269 839 aa20.94■□□□□ 0.94
VEGFB-201ENST00000309422 LRRC4Q9HBW1 653 aa20.94■□□□□ 0.94
VEGFB-201ENST00000309422 SLC2A4RGQ9NR83 387 aa20.94■□□□□ 0.94
VEGFB-201ENST00000309422 WNT16Q9UBV4 365 aa20.94■□□□□ 0.94
VEGFB-201ENST00000309422 NCANO14594 1321 aa20.93■□□□□ 0.94
VEGFB-201ENST00000309422 FAM86C2PA6NEL3 165 aa20.93■□□□□ 0.94
VEGFB-201ENST00000309422 M0QYV0 167 aa20.93■□□□□ 0.94
VEGFB-201ENST00000309422 STK25O00506 426 aa20.93■□□□□ 0.94
VEGFB-201ENST00000309422 NARSO43776 548 aaKnown RBP20.93■□□□□ 0.94
VEGFB-201ENST00000309422 GPR37L1O60883 481 aa20.93■□□□□ 0.94
VEGFB-201ENST00000309422 HDCP19113 662 aa20.93■□□□□ 0.94
VEGFB-201ENST00000309422 SLC9A1P19634 815 aa20.93■□□□□ 0.94
VEGFB-201ENST00000309422 GDI1P31150 447 aa20.93■□□□□ 0.94
VEGFB-201ENST00000309422 VIPR2P41587 438 aa20.93■□□□□ 0.94
VEGFB-201ENST00000309422 USP46P62068 366 aa20.93■□□□□ 0.94
VEGFB-201ENST00000309422 PLCB2Q00722 1185 aa20.93■□□□□ 0.94
VEGFB-201ENST00000309422 GRM2Q14416 872 aa20.93■□□□□ 0.94
VEGFB-201ENST00000309422 MFSD6LQ8IWD5 586 aa20.93■□□□□ 0.94
VEGFB-201ENST00000309422 SIX6OS1Q8N1H7 587 aa20.93■□□□□ 0.94
VEGFB-201ENST00000309422 ARHGAP18Q8N392 663 aa20.93■□□□□ 0.94
VEGFB-201ENST00000309422 BPIFB1Q8TDL5 484 aa20.93■□□□□ 0.94
VEGFB-201ENST00000309422 DNASE1L2Q92874 299 aa20.93■□□□□ 0.94
VEGFB-201ENST00000309422 PBXIP1Q96AQ6 731 aa20.93■□□□□ 0.94
VEGFB-201ENST00000309422 LSM14BQ9BX40 385 aaKnown RBP20.93■□□□□ 0.94
VEGFB-201ENST00000309422 ARHGEF3Q9NR81 526 aa20.93■□□□□ 0.94
VEGFB-201ENST00000309422 TDP1Q9NUW8 608 aa20.93■□□□□ 0.94
VEGFB-201ENST00000309422 GOLGA6L19H0YKK7 550 aa20.92■□□□□ 0.94
VEGFB-201ENST00000309422 FCARP24071 287 aa20.92■□□□□ 0.94
VEGFB-201ENST00000309422 GNA15P30679 374 aa20.92■□□□□ 0.94
VEGFB-201ENST00000309422 PSEN1P49768 467 aa20.92■□□□□ 0.94
VEGFB-201ENST00000309422 GOLGA8FQ08AF8 430 aa20.92■□□□□ 0.94
VEGFB-201ENST00000309422 GOLGA8DPQ0D2H9 430 aa20.92■□□□□ 0.94
VEGFB-201ENST00000309422 RAPGEF1Q13905 1077 aa20.92■□□□□ 0.94
VEGFB-201ENST00000309422 ZNF268Q14587 947 aaPredicted RBP20.92■□□□□ 0.94
VEGFB-201ENST00000309422 ARHGAP29Q52LW3 1261 aa20.92■□□□□ 0.94
VEGFB-201ENST00000309422 MIIPQ5JXC2 388 aa20.92■□□□□ 0.94
VEGFB-201ENST00000309422 HECTD3Q5T447 861 aa20.92■□□□□ 0.94
VEGFB-201ENST00000309422 DDX42Q86XP3 938 aaKnown RBP eCLIP20.92■□□□□ 0.94
VEGFB-201ENST00000309422 SIX5Q8N196 739 aa20.92■□□□□ 0.94
VEGFB-201ENST00000309422 UBR7Q8N806 425 aa20.92■□□□□ 0.94
VEGFB-201ENST00000309422 KAT5Q92993 513 aa20.92■□□□□ 0.94
VEGFB-201ENST00000309422 CDK5RAP1Q96SZ6 601 aaKnown RBP20.92■□□□□ 0.94
VEGFB-201ENST00000309422 SLC46A2Q9BY10 475 aa20.92■□□□□ 0.94
VEGFB-201ENST00000309422 CA14Q9ULX7 337 aa20.92■□□□□ 0.94
VEGFB-201ENST00000309422 DAAM1Q9Y4D1 1078 aa20.92■□□□□ 0.94
VEGFB-201ENST00000309422 CUL9Q8IWT3 2517 aa20.92■□□□□ 0.94
VEGFB-201ENST00000309422 MUC3AQ02505 3323 aa20.91■□□□□ 0.94
VEGFB-201ENST00000309422 ZNF840PA6NDX5 716 aa20.91■□□□□ 0.94
VEGFB-201ENST00000309422 XPO1O14980 1071 aaKnown RBP20.91■□□□□ 0.94
VEGFB-201ENST00000309422 TADA3O75528 432 aa20.91■□□□□ 0.94
VEGFB-201ENST00000309422 TUBP50607 506 aa20.91■□□□□ 0.94
VEGFB-201ENST00000309422 COPB1P53618 953 aaKnown RBP20.91■□□□□ 0.94
VEGFB-201ENST00000309422 PTK2Q05397 1052 aa20.91■□□□□ 0.94
VEGFB-201ENST00000309422 VITQ6UXI7 678 aa20.91■□□□□ 0.94
VEGFB-201ENST00000309422 TMEM150AQ86TG1 271 aa20.91■□□□□ 0.94
VEGFB-201ENST00000309422 SCAMP5Q8TAC9 235 aa20.91■□□□□ 0.94
VEGFB-201ENST00000309422 KREMEN1Q96MU8 473 aa20.91■□□□□ 0.94
VEGFB-201ENST00000309422 RPP25Q9BUL9 199 aaKnown RBP20.91■□□□□ 0.94
VEGFB-201ENST00000309422 UBXN6Q9BZV1 441 aa20.91■□□□□ 0.94
VEGFB-201ENST00000309422 SMOC2Q9H3U7 446 aa20.91■□□□□ 0.94
VEGFB-201ENST00000309422 TMEM30AQ9NV96 361 aa20.91■□□□□ 0.94
VEGFB-201ENST00000309422 DNAJC12Q9UKB3 198 aa20.91■□□□□ 0.94
VEGFB-201ENST00000309422 CEP83Q9Y592 693 aa20.91■□□□□ 0.94
VEGFB-201ENST00000309422 NCOR1O75376 2440 aa20.91■□□□□ 0.94
VEGFB-201ENST00000309422 O00370 1275 aa20.9■□□□□ 0.94
VEGFB-201ENST00000309422 THAP12O43422 761 aa20.9■□□□□ 0.94
VEGFB-201ENST00000309422 BEST1O76090 585 aa20.9■□□□□ 0.94
VEGFB-201ENST00000309422 MBL2P11226 248 aaPredicted RBP20.9■□□□□ 0.94
VEGFB-201ENST00000309422 RALAP11233 206 aa20.9■□□□□ 0.94
VEGFB-201ENST00000309422 BRD2P25440 801 aaKnown RBP20.9■□□□□ 0.94
VEGFB-201ENST00000309422 BPIFB4P59827 614 aa20.9■□□□□ 0.94
VEGFB-201ENST00000309422 GPC5P78333 572 aa20.9■□□□□ 0.94
VEGFB-201ENST00000309422 ZSCAN23Q3MJ62 389 aa20.9■□□□□ 0.94
VEGFB-201ENST00000309422 LCLAT1Q6UWP7 414 aa20.9■□□□□ 0.94
VEGFB-201ENST00000309422 ARL14EPQ8N8R7 260 aaPredicted RBP20.9■□□□□ 0.94
VEGFB-201ENST00000309422 ZMIZ2Q8NF64 920 aa20.9■□□□□ 0.94
VEGFB-201ENST00000309422 GOLGA1Q92805 767 aa20.9■□□□□ 0.94
VEGFB-201ENST00000309422 PDCL3Q9H2J4 239 aa20.9■□□□□ 0.94
VEGFB-201ENST00000309422 GMIPQ9P107 970 aa20.9■□□□□ 0.94
VEGFB-201ENST00000309422 LIMA1Q9UHB6 759 aaKnown RBP20.9■□□□□ 0.94
VEGFB-201ENST00000309422 SCML2Q9UQR0 700 aa20.9■□□□□ 0.94
VEGFB-201ENST00000309422 LGALS16A8MUM7 142 aa20.89■□□□□ 0.93
VEGFB-201ENST00000309422 TNFRSF10BO14763 440 aa20.89■□□□□ 0.93
VEGFB-201ENST00000309422 CHADO15335 359 aa20.89■□□□□ 0.93
VEGFB-201ENST00000309422 PRAMEF12O95522 483 aa20.89■□□□□ 0.93
VEGFB-201ENST00000309422 UBXN1Q04323 297 aa20.89■□□□□ 0.93
VEGFB-201ENST00000309422 PRKCQQ04759 706 aa20.89■□□□□ 0.93
VEGFB-201ENST00000309422 CNGA2Q16280 664 aa20.89■□□□□ 0.93
VEGFB-201ENST00000309422 C1orf228Q6PIY5 440 aa20.89■□□□□ 0.93
VEGFB-201ENST00000309422 PIGZQ86VD9 579 aa20.89■□□□□ 0.93
VEGFB-201ENST00000309422 FLCNQ8NFG4 579 aa20.89■□□□□ 0.93
VEGFB-201ENST00000309422 EXOC4Q96A65 974 aa20.89■□□□□ 0.93
VEGFB-201ENST00000309422 MSANTD3Q96H12 275 aa20.89■□□□□ 0.93
VEGFB-201ENST00000309422 NOX5Q96PH1 765 aa20.89■□□□□ 0.93
VEGFB-201ENST00000309422 SMG9Q9H0W8 520 aaKnown RBP20.89■□□□□ 0.93
VEGFB-201ENST00000309422 ARHGAP26Q9UNA1 814 aa20.89■□□□□ 0.93
VEGFB-201ENST00000309422 WDR3Q9UNX4 943 aaKnown RBP eCLIP20.89■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms