RNA–Protein interactions for RNA: ENST00000308537.4

PDZRN3-202, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene PDZRN3, Length 1,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-202ENST00000308537 TSSK4Q6SA08 328 aa21.06■□□□□ 0.96
PDZRN3-202ENST00000308537 Q6ZS52 159 aa21.06■□□□□ 0.96
PDZRN3-202ENST00000308537 CCDC34Q96HJ3 373 aa21.06■□□□□ 0.96
PDZRN3-202ENST00000308537 TNIP3Q96KP6 325 aa21.06■□□□□ 0.96
PDZRN3-202ENST00000308537 CSNK1G1Q9HCP0 422 aa21.06■□□□□ 0.96
PDZRN3-202ENST00000308537 MAN1B1Q9UKM7 699 aa21.06■□□□□ 0.96
PDZRN3-202ENST00000308537 DCHS1Q96JQ0 3298 aa21.06■□□□□ 0.96
PDZRN3-202ENST00000308537 MYOFQ9NZM1 2061 aa21.06■□□□□ 0.96
PDZRN3-202ENST00000308537 CILPO75339 1184 aa21.05■□□□□ 0.96
PDZRN3-202ENST00000308537 CKMP06732 381 aa21.05■□□□□ 0.96
PDZRN3-202ENST00000308537 PFKLP17858 780 aa21.05■□□□□ 0.96
PDZRN3-202ENST00000308537 HDCP19113 662 aa21.05■□□□□ 0.96
PDZRN3-202ENST00000308537 SLC7A9P82251 487 aa21.05■□□□□ 0.96
PDZRN3-202ENST00000308537 PON2Q15165 354 aa21.05■□□□□ 0.96
PDZRN3-202ENST00000308537 NAIF1Q69YI7 327 aaPredicted RBP21.05■□□□□ 0.96
PDZRN3-202ENST00000308537 KRT39Q6A163 491 aa21.05■□□□□ 0.96
PDZRN3-202ENST00000308537 NUP93Q8N1F7 819 aa21.05■□□□□ 0.96
PDZRN3-202ENST00000308537 SCAMP5Q8TAC9 235 aa21.05■□□□□ 0.96
PDZRN3-202ENST00000308537 SMARCE1Q969G3 411 aa21.05■□□□□ 0.96
PDZRN3-202ENST00000308537 IER2Q9BTL4 223 aa21.05■□□□□ 0.96
PDZRN3-202ENST00000308537 NIF3L1Q9GZT8 377 aa21.05■□□□□ 0.96
PDZRN3-202ENST00000308537 FBRSL1Q9HCM7 1045 aaKnown RBP21.05■□□□□ 0.96
PDZRN3-202ENST00000308537 THG1LQ9NWX6 298 aaKnown RBP21.05■□□□□ 0.96
PDZRN3-202ENST00000308537 TRPM5Q9NZQ8 1165 aa21.05■□□□□ 0.96
PDZRN3-202ENST00000308537 CIZ1Q9ULV3 898 aaPredicted RBP21.05■□□□□ 0.96
PDZRN3-202ENST00000308537 CEP250Q9BV73 2442 aa21.05■□□□□ 0.96
PDZRN3-202ENST00000308537 CETN3O15182 167 aa21.04■□□□□ 0.96
PDZRN3-202ENST00000308537 LILRB5O75023 590 aa21.04■□□□□ 0.96
PDZRN3-202ENST00000308537 ZDHHC11BP0C7U3 371 aa21.04■□□□□ 0.96
PDZRN3-202ENST00000308537 KRT13P13646 458 aa21.04■□□□□ 0.96
PDZRN3-202ENST00000308537 P4HA1P13674 534 aa21.04■□□□□ 0.96
PDZRN3-202ENST00000308537 PGFP49763 221 aa21.04■□□□□ 0.96
PDZRN3-202ENST00000308537 SLC5A3P53794 718 aa21.04■□□□□ 0.96
PDZRN3-202ENST00000308537 CSTF1Q05048 431 aaKnown RBP21.04■□□□□ 0.96
PDZRN3-202ENST00000308537 EML3Q32P44 896 aa21.04■□□□□ 0.96
PDZRN3-202ENST00000308537 CBWD6Q4V339 395 aa21.04■□□□□ 0.96
PDZRN3-202ENST00000308537 CBWD3Q5JTY5 395 aa21.04■□□□□ 0.96
PDZRN3-202ENST00000308537 CBWD5Q5RIA9 395 aa21.04■□□□□ 0.96
PDZRN3-202ENST00000308537 SUMF1Q8NBK3 374 aa21.04■□□□□ 0.96
PDZRN3-202ENST00000308537 SLC2A14Q8TDB8 520 aa21.04■□□□□ 0.96
PDZRN3-202ENST00000308537 SH3RF2Q8TEC5 729 aa21.04■□□□□ 0.96
PDZRN3-202ENST00000308537 OSCP1Q8WVF1 389 aa21.04■□□□□ 0.96
PDZRN3-202ENST00000308537 SMARCD1Q96GM5 515 aa21.04■□□□□ 0.96
PDZRN3-202ENST00000308537 ZFRQ96KR1 1074 aaKnown RBP21.04■□□□□ 0.96
PDZRN3-202ENST00000308537 MMRN2Q9H8L6 949 aa21.04■□□□□ 0.96
PDZRN3-202ENST00000308537 CYP3A43Q9HB55 503 aa21.04■□□□□ 0.96
PDZRN3-202ENST00000308537 DMAP1Q9NPF5 467 aaPredicted RBP21.04■□□□□ 0.96
PDZRN3-202ENST00000308537 KRT82Q9NSB4 513 aa21.04■□□□□ 0.96
PDZRN3-202ENST00000308537 COQ4Q9Y3A0 265 aa21.04■□□□□ 0.96
PDZRN3-202ENST00000308537 WNT6Q9Y6F9 365 aa21.04■□□□□ 0.96
PDZRN3-202ENST00000308537 HHLA1C9JL84 531 aa21.03■□□□□ 0.96
PDZRN3-202ENST00000308537 SLC16A3O15427 465 aaKnown RBP21.03■□□□□ 0.96
PDZRN3-202ENST00000308537 SMC2O95347 1197 aa21.03■□□□□ 0.96
PDZRN3-202ENST00000308537 HOXC13P31276 330 aa21.03■□□□□ 0.96
PDZRN3-202ENST00000308537 PPP3CCP48454 512 aa21.03■□□□□ 0.96
PDZRN3-202ENST00000308537 MXI1P50539 228 aa21.03■□□□□ 0.96
PDZRN3-202ENST00000308537 SATB1Q01826 763 aa21.03■□□□□ 0.96
PDZRN3-202ENST00000308537 GAB4Q2WGN9 574 aa21.03■□□□□ 0.96
PDZRN3-202ENST00000308537 TMEM196Q5HYL7 178 aa21.03■□□□□ 0.96
PDZRN3-202ENST00000308537 SNX30Q5VWJ9 437 aa21.03■□□□□ 0.96
PDZRN3-202ENST00000308537 FSTL4Q6MZW2 842 aa21.03■□□□□ 0.96
PDZRN3-202ENST00000308537 EZH1Q92800 747 aaPredicted RBP21.03■□□□□ 0.96
PDZRN3-202ENST00000308537 LINC00597Q9H2U6 94 aa21.03■□□□□ 0.96
PDZRN3-202ENST00000308537 SEMA4AQ9H3S1 761 aa21.03■□□□□ 0.96
PDZRN3-202ENST00000308537 FAM49BQ9NUQ9 324 aa21.03■□□□□ 0.96
PDZRN3-202ENST00000308537 PPP1R3GB7ZBB8 358 aa21.02■□□□□ 0.96
PDZRN3-202ENST00000308537 TRDMT1O14717 391 aaKnown RBP21.02■□□□□ 0.96
PDZRN3-202ENST00000308537 AP1G2O75843 785 aa21.02■□□□□ 0.96
PDZRN3-202ENST00000308537 YWHAQP27348 245 aa21.02■□□□□ 0.96
PDZRN3-202ENST00000308537 GJA4P35212 333 aa21.02■□□□□ 0.96
PDZRN3-202ENST00000308537 FKBP3Q00688 224 aaKnown RBP21.02■□□□□ 0.96
PDZRN3-202ENST00000308537 LRRC63Q05C16 580 aa21.02■□□□□ 0.96
PDZRN3-202ENST00000308537 PDGFRLQ15198 375 aa21.02■□□□□ 0.96
PDZRN3-202ENST00000308537 ISM2Q6H9L7 571 aa21.02■□□□□ 0.96
PDZRN3-202ENST00000308537 PKN3Q6P5Z2 889 aa21.02■□□□□ 0.96
PDZRN3-202ENST00000308537 CLEC20AQ6ZU45 233 aa21.02■□□□□ 0.96
PDZRN3-202ENST00000308537 GPRIN1Q7Z2K8 1008 aa21.02■□□□□ 0.96
PDZRN3-202ENST00000308537 FBXL13Q8NEE6 735 aa21.02■□□□□ 0.96
PDZRN3-202ENST00000308537 OVCA2Q8WZ82 227 aa21.02■□□□□ 0.96
PDZRN3-202ENST00000308537 SLC35C1Q96A29 364 aa21.02■□□□□ 0.96
PDZRN3-202ENST00000308537 HNRNPABQ99729 332 aaKnown RBP21.02■□□□□ 0.96
PDZRN3-202ENST00000308537 ARID3AQ99856 593 aa21.02■□□□□ 0.96
PDZRN3-202ENST00000308537 DUSP9Q99956 384 aaKnown RBP21.02■□□□□ 0.96
PDZRN3-202ENST00000308537 ECT2Q9H8V3 914 aa21.02■□□□□ 0.96
PDZRN3-202ENST00000308537 EHD2Q9NZN4 543 aa21.02■□□□□ 0.96
PDZRN3-202ENST00000308537 DNAH14Q0VDD8 3507 aa21.01■□□□□ 0.95
PDZRN3-202ENST00000308537 DMXL1Q9Y485 3027 aa21.01■□□□□ 0.95
PDZRN3-202ENST00000308537 K7ESF4 209 aa21.01■□□□□ 0.95
PDZRN3-202ENST00000308537 LEFTY2O00292 366 aa21.01■□□□□ 0.95
PDZRN3-202ENST00000308537 RTN3O95197 1032 aaPredicted RBP21.01■□□□□ 0.95
PDZRN3-202ENST00000308537 PAPSS2O95340 614 aaPredicted RBP21.01■□□□□ 0.95
PDZRN3-202ENST00000308537 EPB41P11171 864 aaKnown RBP21.01■□□□□ 0.95
PDZRN3-202ENST00000308537 MORC3Q14149 939 aa21.01■□□□□ 0.95
PDZRN3-202ENST00000308537 DGKKQ5KSL6 1271 aa21.01■□□□□ 0.95
PDZRN3-202ENST00000308537 TTI2Q6NXR4 508 aa21.01■□□□□ 0.95
PDZRN3-202ENST00000308537 SPEM1Q8N4L4 309 aa21.01■□□□□ 0.95
PDZRN3-202ENST00000308537 TATDN2Q93075 761 aa21.01■□□□□ 0.95
PDZRN3-202ENST00000308537 FAXDC2Q96IV6 333 aa21.01■□□□□ 0.95
PDZRN3-202ENST00000308537 SLITRK1Q96PX8 696 aa21.01■□□□□ 0.95
PDZRN3-202ENST00000308537 MED10Q9BTT4 135 aa21.01■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms