RNA–Protein interactions for RNA: ENST00000307017.8

USP38-201, Transcript of ubiquitin specific peptidase 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP38, Length 7,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-201ENST00000307017 ERP44Q9BS26 406 aa13.07□□□□□ -0.32
USP38-201ENST00000307017 GRIP2Q9C0E4 1043 aa13.07□□□□□ -0.32
USP38-201ENST00000307017 TMEM165Q9HC07 324 aa13.07□□□□□ -0.32
USP38-201ENST00000307017 NEUROD4Q9HD90 331 aa13.07□□□□□ -0.32
USP38-201ENST00000307017 ATP7AQ04656 1500 aa13.07□□□□□ -0.32
USP38-201ENST00000307017 CTDNEP1O95476 244 aa13.07□□□□□ -0.32
USP38-201ENST00000307017 ETS1P14921 441 aa13.07□□□□□ -0.32
USP38-201ENST00000307017 GPC1P35052 558 aa13.07□□□□□ -0.32
USP38-201ENST00000307017 PTGER2P43116 358 aa13.07□□□□□ -0.32
USP38-201ENST00000307017 DEFA1P59665 94 aa13.07□□□□□ -0.32
USP38-201ENST00000307017 DEFA3P59666 94 aa13.07□□□□□ -0.32
USP38-201ENST00000307017 ENTPD7Q9NQZ7 604 aa13.07□□□□□ -0.32
USP38-201ENST00000307017 RPS6KL1Q9Y6S9 549 aa13.07□□□□□ -0.32
USP38-201ENST00000307017 STARD3Q14849 445 aa13.07□□□□□ -0.32
USP38-201ENST00000307017 AGKQ53H12 422 aa13.07□□□□□ -0.32
USP38-201ENST00000307017 TSHZ1Q6ZSZ6 1077 aa13.07□□□□□ -0.32
USP38-201ENST00000307017 C19orf18Q8NEA5 215 aa13.07□□□□□ -0.32
USP38-201ENST00000307017 KLHL4Q9C0H6 718 aa13.07□□□□□ -0.32
USP38-201ENST00000307017 OSGEPL1Q9H4B0 414 aa13.07□□□□□ -0.32
USP38-201ENST00000307017 RIBC2Q9H4K1 309 aa13.07□□□□□ -0.32
USP38-201ENST00000307017 TBC1D22BQ9NU19 505 aa13.07□□□□□ -0.32
USP38-201ENST00000307017 TOR4AQ9NXH8 423 aa13.07□□□□□ -0.32
USP38-201ENST00000307017 TBX22Q9Y458 520 aa13.07□□□□□ -0.32
USP38-201ENST00000307017 TRIM13O60858 407 aa13.07□□□□□ -0.32
USP38-201ENST00000307017 ZNF189O75820 626 aaPredicted RBP13.07□□□□□ -0.32
USP38-201ENST00000307017 POU6F1Q14863 301 aa13.07□□□□□ -0.32
USP38-201ENST00000307017 ZIK1Q3SY52 487 aaPredicted RBP13.07□□□□□ -0.32
USP38-201ENST00000307017 GDPD5Q8WTR4 605 aa13.07□□□□□ -0.32
USP38-201ENST00000307017 MOV10L1Q9BXT6 1211 aaKnown RBP13.07□□□□□ -0.32
USP38-201ENST00000307017 CRLS1Q9UJA2 301 aa13.07□□□□□ -0.32
USP38-201ENST00000307017 SMG5Q9UPR3 1016 aaKnown RBP13.07□□□□□ -0.32
USP38-201ENST00000307017 MAGEA13PA6NCF6 341 aa13.06□□□□□ -0.32
USP38-201ENST00000307017 hCG_1984214I3L0E3 225 aa13.06□□□□□ -0.32
USP38-201ENST00000307017 ZNF862O60290 1169 aa13.06□□□□□ -0.32
USP38-201ENST00000307017 EYA4O95677 639 aa13.06□□□□□ -0.32
USP38-201ENST00000307017 VAC14Q08AM6 782 aa13.06□□□□□ -0.32
USP38-201ENST00000307017 MTHFD1LQ6UB35 978 aa13.06□□□□□ -0.32
USP38-201ENST00000307017 SPATA6LQ8N4H0 392 aa13.06□□□□□ -0.32
USP38-201ENST00000307017 ZNF713Q8N859 430 aaPredicted RBP13.06□□□□□ -0.32
USP38-201ENST00000307017 PHF20Q9BVI0 1012 aa13.06□□□□□ -0.32
USP38-201ENST00000307017 CINPQ9BW66 212 aaPredicted RBP13.06□□□□□ -0.32
USP38-201ENST00000307017 TARS2Q9BW92 718 aaKnown RBP13.06□□□□□ -0.32
USP38-201ENST00000307017 TRPC4Q9UBN4 977 aa13.06□□□□□ -0.32
USP38-201ENST00000307017 H7C1W4 665 aa13.06□□□□□ -0.32
USP38-201ENST00000307017 KLHL2O95198 593 aa13.06□□□□□ -0.32
USP38-201ENST00000307017 CACNA2D1P54289 1103 aa13.06□□□□□ -0.32
USP38-201ENST00000307017 RNF19BQ6ZMZ0 732 aa13.06□□□□□ -0.32
USP38-201ENST00000307017 MYCBPAPQ8TBZ2 947 aa13.06□□□□□ -0.32
USP38-201ENST00000307017 VTA1Q9NP79 307 aa13.06□□□□□ -0.32
USP38-201ENST00000307017 SAE1Q9UBE0 346 aaPredicted RBP13.06□□□□□ -0.32
USP38-201ENST00000307017 PCDHA10Q9Y5I2 948 aa13.06□□□□□ -0.32
USP38-201ENST00000307017 WDR62O43379 1518 aa13.06□□□□□ -0.32
USP38-201ENST00000307017 PVALEFA0A1B0GWK0 134 aa13.06□□□□□ -0.32
USP38-201ENST00000307017 GNG14A0A1W2PPG7 69 aa13.06□□□□□ -0.32
USP38-201ENST00000307017 PPP1R3GB7ZBB8 358 aa13.06□□□□□ -0.32
USP38-201ENST00000307017 RBP3P10745 1247 aa13.06□□□□□ -0.32
USP38-201ENST00000307017 SGSM1Q2NKQ1 1148 aa13.06□□□□□ -0.32
USP38-201ENST00000307017 WLSQ5T9L3 541 aa13.06□□□□□ -0.32
USP38-201ENST00000307017 CLEC4GQ6UXB4 293 aa13.06□□□□□ -0.32
USP38-201ENST00000307017 FICDQ9BVA6 458 aa13.06□□□□□ -0.32
USP38-201ENST00000307017 SCUBE2Q9NQ36 999 aa13.06□□□□□ -0.32
USP38-201ENST00000307017 SH3BP1Q9Y3L3 701 aa13.06□□□□□ -0.32
USP38-201ENST00000307017 CDH16O75309 829 aa13.06□□□□□ -0.32
USP38-201ENST00000307017 FAM84BQ96KN1 310 aaPredicted RBP13.06□□□□□ -0.32
USP38-201ENST00000307017 TMEM39BQ9GZU3 492 aa13.06□□□□□ -0.32
USP38-201ENST00000307017 FAM96AQ9H5X1 160 aa13.06□□□□□ -0.32
USP38-201ENST00000307017 GPBP1L1Q9HC44 474 aaPredicted RBP13.06□□□□□ -0.32
USP38-201ENST00000307017 HS6ST1O60243 411 aa13.06□□□□□ -0.32
USP38-201ENST00000307017 CCNT2O60583 730 aaKnown RBP13.06□□□□□ -0.32
USP38-201ENST00000307017 RAG1P15918 1043 aa13.06□□□□□ -0.32
USP38-201ENST00000307017 KRT76Q01546 638 aa13.06□□□□□ -0.32
USP38-201ENST00000307017 MMRN1Q13201 1228 aa13.06□□□□□ -0.32
USP38-201ENST00000307017 PERM1Q5SV97 790 aa13.06□□□□□ -0.32
USP38-201ENST00000307017 ATF7IP2Q5U623 682 aa13.06□□□□□ -0.32
USP38-201ENST00000307017 LRRC8DQ7L1W4 858 aa13.06□□□□□ -0.32
USP38-201ENST00000307017 PODNQ7Z5L7 613 aa13.06□□□□□ -0.32
USP38-201ENST00000307017 ADSSL1Q8N142 457 aa13.06□□□□□ -0.32
USP38-201ENST00000307017 GUF1Q8N442 669 aaKnown RBP13.06□□□□□ -0.32
USP38-201ENST00000307017 MASTLQ96GX5 879 aa13.06□□□□□ -0.32
USP38-201ENST00000307017 WDCPQ9H6R7 721 aa13.06□□□□□ -0.32
USP38-201ENST00000307017 DDX20Q9UHI6 824 aaKnown RBP13.06□□□□□ -0.32
USP38-201ENST00000307017 CLEC4AQ9UMR7 237 aa13.06□□□□□ -0.32
USP38-201ENST00000307017 CDHR2Q9BYE9 1310 aa13.06□□□□□ -0.32
USP38-201ENST00000307017 ITGAXP20702 1163 aa13.05□□□□□ -0.32
USP38-201ENST00000307017 EPHX4Q8IUS5 362 aa13.05□□□□□ -0.32
USP38-201ENST00000307017 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.05□□□□□ -0.32
USP38-201ENST00000307017 FEZF2Q8TBJ5 459 aa13.05□□□□□ -0.32
USP38-201ENST00000307017 EDEM1Q92611 657 aa13.05□□□□□ -0.32
USP38-201ENST00000307017 RHOBTB2Q9BYZ6 727 aa13.05□□□□□ -0.32
USP38-201ENST00000307017 ARHGEF12Q9NZN5 1544 aa13.05□□□□□ -0.32
USP38-201ENST00000307017 ADAMTS12P58397 1594 aa13.05□□□□□ -0.32
USP38-201ENST00000307017 LOC100506127A0A0U1RQW1 187 aa13.05□□□□□ -0.32
USP38-201ENST00000307017 WDR27A2RRH5 827 aa13.05□□□□□ -0.32
USP38-201ENST00000307017 SOX6P35712 828 aa13.05□□□□□ -0.32
USP38-201ENST00000307017 MILR1Q7Z6M3 343 aa13.05□□□□□ -0.32
USP38-201ENST00000307017 PACS2Q86VP3 889 aa13.05□□□□□ -0.32
USP38-201ENST00000307017 C7orf57Q8NEG2 295 aa13.05□□□□□ -0.32
USP38-201ENST00000307017 ISCUQ9H1K1 167 aa13.05□□□□□ -0.32
USP38-201ENST00000307017 VCPKMTQ9H867 229 aa13.05□□□□□ -0.32
USP38-201ENST00000307017 COPS7BQ9H9Q2 264 aaPredicted RBP13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms