RNA–Protein interactions for RNA: ENST00000306085.10

TRIM56-201, Transcript of tripartite motif containing 56, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRIM56, Length 10,952 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-201ENST00000306085 CCR4P51679 360 aa13.84□□□□□ -0.19
TRIM56-201ENST00000306085 BST2Q10589 180 aaKnown RBP13.84□□□□□ -0.19
TRIM56-201ENST00000306085 KLHL32Q96NJ5 620 aa13.84□□□□□ -0.19
TRIM56-201ENST00000306085 SLC35C2Q9NQQ7 365 aa13.84□□□□□ -0.19
TRIM56-201ENST00000306085 A0A0B4J269 797 aa13.84□□□□□ -0.19
TRIM56-201ENST00000306085 TUBB3Q13509 450 aa13.84□□□□□ -0.19
TRIM56-201ENST00000306085 NFYCQ13952 458 aa13.84□□□□□ -0.19
TRIM56-201ENST00000306085 SMCO1Q147U7 214 aa13.84□□□□□ -0.19
TRIM56-201ENST00000306085 PYDC2Q56P42 97 aa13.84□□□□□ -0.19
TRIM56-201ENST00000306085 EID3Q8N140 333 aa13.84□□□□□ -0.19
TRIM56-201ENST00000306085 EAF2Q96CJ1 260 aaPredicted RBP13.84□□□□□ -0.19
TRIM56-201ENST00000306085 ZNF560Q96MR9 790 aa13.84□□□□□ -0.19
TRIM56-201ENST00000306085 STN1Q9H668 368 aaKnown RBP13.84□□□□□ -0.19
TRIM56-201ENST00000306085 AGAP9Q5VTM2 703 aa13.84□□□□□ -0.19
TRIM56-201ENST00000306085 MSANTD1Q6ZTZ1 278 aa13.84□□□□□ -0.19
TRIM56-201ENST00000306085 PI4KBQ9UBF8 816 aa13.84□□□□□ -0.19
TRIM56-201ENST00000306085 RPAP1Q9BWH6 1393 aaPredicted RBP13.83□□□□□ -0.19
TRIM56-201ENST00000306085 EFR3AQ14156 821 aa13.83□□□□□ -0.19
TRIM56-201ENST00000306085 CCDC80Q76M96 950 aa13.83□□□□□ -0.19
TRIM56-201ENST00000306085 SLC7A14Q8TBB6 771 aa13.83□□□□□ -0.19
TRIM56-201ENST00000306085 AIFM3Q96NN9 605 aa13.83□□□□□ -0.19
TRIM56-201ENST00000306085 GREM2Q9H772 168 aa13.83□□□□□ -0.19
TRIM56-201ENST00000306085 RCOR1Q9UKL0 485 aa13.83□□□□□ -0.19
TRIM56-201ENST00000306085 ITGADQ13349 1161 aa13.83□□□□□ -0.2
TRIM56-201ENST00000306085 USF2Q15853 346 aaPredicted RBP13.83□□□□□ -0.2
TRIM56-201ENST00000306085 WDR24Q96S15 920 aa13.83□□□□□ -0.2
TRIM56-201ENST00000306085 USP27XA6NNY8 438 aa13.83□□□□□ -0.2
TRIM56-201ENST00000306085 STIP1P31948 543 aaKnown RBP13.83□□□□□ -0.2
TRIM56-201ENST00000306085 FGD3Q5JSP0 725 aa13.83□□□□□ -0.2
TRIM56-201ENST00000306085 URB2Q14146 1524 aaKnown RBP13.83□□□□□ -0.2
TRIM56-201ENST00000306085 HS6ST1O60243 411 aa13.83□□□□□ -0.2
TRIM56-201ENST00000306085 TADA2AO75478 443 aa13.83□□□□□ -0.2
TRIM56-201ENST00000306085 FAM58BPP0C7Q3 252 aa13.83□□□□□ -0.2
TRIM56-201ENST00000306085 ACADLP28330 430 aa13.83□□□□□ -0.2
TRIM56-201ENST00000306085 SVOPQ8N4V2 548 aa13.83□□□□□ -0.2
TRIM56-201ENST00000306085 TSPAN14Q8NG11 270 aa13.83□□□□□ -0.2
TRIM56-201ENST00000306085 PUS7LQ9H0K6 701 aaKnown RBP13.83□□□□□ -0.2
TRIM56-201ENST00000306085 RABGEF1Q9UJ41 708 aa13.83□□□□□ -0.2
TRIM56-201ENST00000306085 DYNC1LI2O43237 492 aaPredicted RBP13.83□□□□□ -0.2
TRIM56-201ENST00000306085 TMEM117Q9H0C3 514 aa13.83□□□□□ -0.2
TRIM56-201ENST00000306085 VPS9D1Q9Y2B5 631 aa13.83□□□□□ -0.2
TRIM56-201ENST00000306085 FAM111AQ96PZ2 611 aa13.83□□□□□ -0.2
TRIM56-201ENST00000306085 GOLPH3Q9H4A6 298 aa13.83□□□□□ -0.2
TRIM56-201ENST00000306085 CUL7Q14999 1698 aa13.83□□□□□ -0.2
TRIM56-201ENST00000306085 VPS26AO75436 327 aa13.83□□□□□ -0.2
TRIM56-201ENST00000306085 AGBL2Q5U5Z8 902 aa13.83□□□□□ -0.2
TRIM56-201ENST00000306085 CYB5D1Q6P9G0 228 aa13.83□□□□□ -0.2
TRIM56-201ENST00000306085 C2orf40Q9H1Z8 148 aa13.83□□□□□ -0.2
TRIM56-201ENST00000306085 ELOVL6Q9H5J4 265 aa13.83□□□□□ -0.2
TRIM56-201ENST00000306085 STOML2Q9UJZ1 356 aa13.83□□□□□ -0.2
TRIM56-201ENST00000306085 AGO2Q9UKV8 859 aaKnown RBP13.83□□□□□ -0.2
TRIM56-201ENST00000306085 MYH8P13535 1937 aa13.83□□□□□ -0.2
TRIM56-201ENST00000306085 NQO1P15559 274 aaKnown RBP13.82□□□□□ -0.2
TRIM56-201ENST00000306085 GEMIN4P57678 1058 aaKnown RBP13.82□□□□□ -0.2
TRIM56-201ENST00000306085 IPCEF1Q8WWN9 437 aaPredicted RBP13.82□□□□□ -0.2
TRIM56-201ENST00000306085 FAR2Q96K12 515 aa13.82□□□□□ -0.2
TRIM56-201ENST00000306085 GABBR1Q9UBS5 961 aa13.82□□□□□ -0.2
TRIM56-201ENST00000306085 SNX4O95219 450 aa13.82□□□□□ -0.2
TRIM56-201ENST00000306085 RAD23AP54725 363 aa13.82□□□□□ -0.2
TRIM56-201ENST00000306085 FAM71DQ8N9W8 422 aa13.82□□□□□ -0.2
TRIM56-201ENST00000306085 MED15Q96RN5 788 aa13.82□□□□□ -0.2
TRIM56-201ENST00000306085 PRKAB2O43741 272 aa13.82□□□□□ -0.2
TRIM56-201ENST00000306085 FGFR2P21802 821 aa13.82□□□□□ -0.2
TRIM56-201ENST00000306085 GRIK3Q13003 919 aa13.82□□□□□ -0.2
TRIM56-201ENST00000306085 SERPINB12Q96P63 405 aa13.82□□□□□ -0.2
TRIM56-201ENST00000306085 EFCAB1Q9HAE3 211 aa13.82□□□□□ -0.2
TRIM56-201ENST00000306085 MAP1BP46821 2468 aaKnown RBP13.82□□□□□ -0.2
TRIM56-201ENST00000306085 PDGFRBP09619 1106 aa13.82□□□□□ -0.2
TRIM56-201ENST00000306085 IRAK1BP1Q5VVH5 260 aa13.82□□□□□ -0.2
TRIM56-201ENST00000306085 SPIRE2Q8WWL2 714 aa13.82□□□□□ -0.2
TRIM56-201ENST00000306085 LXNQ9BS40 222 aa13.82□□□□□ -0.2
TRIM56-201ENST00000306085 RIBC2Q9H4K1 309 aa13.82□□□□□ -0.2
TRIM56-201ENST00000306085 SH3GLB2Q9NR46 395 aa13.82□□□□□ -0.2
TRIM56-201ENST00000306085 LIN7AO14910 233 aaPredicted RBP13.82□□□□□ -0.2
TRIM56-201ENST00000306085 PLEKHA8P1O95397 391 aa13.82□□□□□ -0.2
TRIM56-201ENST00000306085 GLRBP48167 497 aa13.82□□□□□ -0.2
TRIM56-201ENST00000306085 FAM98BQ52LJ0 330 aaKnown RBP13.82□□□□□ -0.2
TRIM56-201ENST00000306085 FAM160B2Q86V87 743 aa13.82□□□□□ -0.2
TRIM56-201ENST00000306085 RASSF5Q8WWW0 418 aa13.82□□□□□ -0.2
TRIM56-201ENST00000306085 DGCR6LQ9BY27 220 aa13.82□□□□□ -0.2
TRIM56-201ENST00000306085 CATSPERBQ9H7T0 1116 aa13.82□□□□□ -0.2
TRIM56-201ENST00000306085 STX11O75558 287 aa13.82□□□□□ -0.2
TRIM56-201ENST00000306085 TTLL4Q14679 1199 aa13.82□□□□□ -0.2
TRIM56-201ENST00000306085 NAA30Q147X3 362 aaPredicted RBP13.82□□□□□ -0.2
TRIM56-201ENST00000306085 RASGRP2Q7LDG7 609 aa13.82□□□□□ -0.2
TRIM56-201ENST00000306085 ENOSF1Q7L5Y1 443 aa13.82□□□□□ -0.2
TRIM56-201ENST00000306085 CENPIQ92674 756 aaPredicted RBP13.82□□□□□ -0.2
TRIM56-201ENST00000306085 CAB39LQ9H9S4 337 aa13.82□□□□□ -0.2
TRIM56-201ENST00000306085 PPCSQ9HAB8 311 aa13.82□□□□□ -0.2
TRIM56-201ENST00000306085 CYP4F12Q9HCS2 524 aa13.82□□□□□ -0.2
TRIM56-201ENST00000306085 BCLAF3A2AJT9 711 aaKnown RBP13.82□□□□□ -0.2
TRIM56-201ENST00000306085 MAGEA4P43358 317 aa13.82□□□□□ -0.2
TRIM56-201ENST00000306085 PDK1Q15118 436 aa13.82□□□□□ -0.2
TRIM56-201ENST00000306085 TCHHL1Q5QJ38 904 aaPredicted RBP13.82□□□□□ -0.2
TRIM56-201ENST00000306085 ZMYM1Q5SVZ6 1142 aa13.82□□□□□ -0.2
TRIM56-201ENST00000306085 THOC7Q6I9Y2 204 aaKnown RBP13.82□□□□□ -0.2
TRIM56-201ENST00000306085 KBTBD2Q8IY47 623 aa13.82□□□□□ -0.2
TRIM56-201ENST00000306085 DAW1Q8N136 415 aa13.82□□□□□ -0.2
TRIM56-201ENST00000306085 BLOC1S5Q8TDH9 187 aa13.82□□□□□ -0.2
TRIM56-201ENST00000306085 ZNF669Q96BR6 464 aaPredicted RBP13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms