RNA–Protein interactions for RNA: ENST00000301019.8

CDT1-201, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDT1, Length 3,240 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-201ENST00000301019 PTK7Q13308 1070 aa15.02■□□□□ -0
CDT1-201ENST00000301019 TGFBIQ15582 683 aa15.02■□□□□ -0
CDT1-201ENST00000301019 SMUG1Q53HV7 270 aa15.02■□□□□ -0
CDT1-201ENST00000301019 C16orf46Q6P387 395 aa15.02■□□□□ -0
CDT1-201ENST00000301019 Q8N9G6 341 aaPredicted RBP15.02■□□□□ -0
CDT1-201ENST00000301019 HSPH1Q92598 858 aa15.02■□□□□ -0
CDT1-201ENST00000301019 DCPSQ96C86 337 aaKnown RBP15.02■□□□□ -0
CDT1-201ENST00000301019 RPL26L1Q9UNX3 145 aaKnown RBP15.02■□□□□ -0
CDT1-201ENST00000301019 HBS1LQ9Y450 684 aaKnown RBP15.02■□□□□ -0
CDT1-201ENST00000301019 TAF1LQ8IZX4 1826 aa15.02■□□□□ -0
CDT1-201ENST00000301019 DDX39AO00148 427 aaKnown RBP15.02□□□□□ -0.01
CDT1-201ENST00000301019 PDXKO00764 312 aa15.02□□□□□ -0.01
CDT1-201ENST00000301019 SORBS3O60504 671 aa15.02□□□□□ -0.01
CDT1-201ENST00000301019 FUCA1P04066 466 aa15.02□□□□□ -0.01
CDT1-201ENST00000301019 F7P08709 466 aaPredicted RBP15.02□□□□□ -0.01
CDT1-201ENST00000301019 IKQ13123 557 aaPredicted RBP15.02□□□□□ -0.01
CDT1-201ENST00000301019 ZNF410Q86VK4 478 aa15.02□□□□□ -0.01
CDT1-201ENST00000301019 ZNF276Q8N554 614 aa15.02□□□□□ -0.01
CDT1-201ENST00000301019 EPS8L1Q8TE68 723 aa15.02□□□□□ -0.01
CDT1-201ENST00000301019 DQX1Q8TE96 717 aaKnown RBP15.02□□□□□ -0.01
CDT1-201ENST00000301019 TOPORSQ9NS56 1045 aaPredicted RBP15.02□□□□□ -0.01
CDT1-201ENST00000301019 ARHGAP10A1A4S6 786 aa15.02□□□□□ -0.01
CDT1-201ENST00000301019 USP17L10C9JJH3 530 aa15.02□□□□□ -0.01
CDT1-201ENST00000301019 ZBTB11O95625 1053 aaPredicted RBP15.02□□□□□ -0.01
CDT1-201ENST00000301019 HOXA13P31271 388 aaPredicted RBP15.02□□□□□ -0.01
CDT1-201ENST00000301019 HELQQ8TDG4 1101 aa15.02□□□□□ -0.01
CDT1-201ENST00000301019 DIS3LQ8TF46 1054 aaKnown RBP15.02□□□□□ -0.01
CDT1-201ENST00000301019 LRGUKQ96M69 825 aa15.02□□□□□ -0.01
CDT1-201ENST00000301019 EPS8L2Q9H6S3 715 aa15.02□□□□□ -0.01
CDT1-201ENST00000301019 SOX13Q9UN79 622 aa15.02□□□□□ -0.01
CDT1-201ENST00000301019 POMPQ9Y244 141 aa15.02□□□□□ -0.01
CDT1-201ENST00000301019 UTRNP46939 3433 aa15.01□□□□□ -0.01
CDT1-201ENST00000301019 BCORQ6W2J9 1755 aa15.01□□□□□ -0.01
CDT1-201ENST00000301019 HNRNPCL1O60812 293 aaKnown RBP15.01□□□□□ -0.01
CDT1-201ENST00000301019 HDAC4P56524 1084 aa15.01□□□□□ -0.01
CDT1-201ENST00000301019 CYP2A13Q16696 494 aa15.01□□□□□ -0.01
CDT1-201ENST00000301019 ODR4Q5SWX8 454 aa15.01□□□□□ -0.01
CDT1-201ENST00000301019 NUP93Q8N1F7 819 aa15.01□□□□□ -0.01
CDT1-201ENST00000301019 DRC3Q9H069 523 aa15.01□□□□□ -0.01
CDT1-201ENST00000301019 TRPC7Q9HCX4 862 aa15.01□□□□□ -0.01
CDT1-201ENST00000301019 HOMER2Q9NSB8 354 aa15.01□□□□□ -0.01
CDT1-201ENST00000301019 DMTF1Q9Y222 760 aa15.01□□□□□ -0.01
CDT1-201ENST00000301019 ACTL7BQ9Y614 415 aa15.01□□□□□ -0.01
CDT1-201ENST00000301019 UGT1A9O60656 530 aa15.01□□□□□ -0.01
CDT1-201ENST00000301019 MAGEC1O60732 1142 aa15.01□□□□□ -0.01
CDT1-201ENST00000301019 PPP1R11O60927 126 aaPredicted RBP15.01□□□□□ -0.01
CDT1-201ENST00000301019 APBA3O96018 575 aa15.01□□□□□ -0.01
CDT1-201ENST00000301019 TUFMP49411 452 aaKnown RBP15.01□□□□□ -0.01
CDT1-201ENST00000301019 NKX2-5P52952 324 aaPredicted RBP15.01□□□□□ -0.01
CDT1-201ENST00000301019 HIF1AQ16665 826 aa15.01□□□□□ -0.01
CDT1-201ENST00000301019 SMTNL2Q2TAL5 461 aa15.01□□□□□ -0.01
CDT1-201ENST00000301019 ZCCHC9Q8N567 271 aaKnown RBP15.01□□□□□ -0.01
CDT1-201ENST00000301019 NAT16Q8N8M0 369 aa15.01□□□□□ -0.01
CDT1-201ENST00000301019 POMGNT1Q8WZA1 660 aa15.01□□□□□ -0.01
CDT1-201ENST00000301019 KCNN1Q92952 543 aa15.01□□□□□ -0.01
CDT1-201ENST00000301019 NT5C1BQ96P26 610 aa15.01□□□□□ -0.01
CDT1-201ENST00000301019 SYT11Q9BT88 431 aa15.01□□□□□ -0.01
CDT1-201ENST00000301019 C17orf75Q9HAS0 396 aa15.01□□□□□ -0.01
CDT1-201ENST00000301019 UGT1A7Q9HAW7 530 aa15.01□□□□□ -0.01
CDT1-201ENST00000301019 UGT1A10Q9HAW8 530 aa15.01□□□□□ -0.01
CDT1-201ENST00000301019 UGT1A8Q9HAW9 530 aa15.01□□□□□ -0.01
CDT1-201ENST00000301019 ARHGAP26Q9UNA1 814 aa15.01□□□□□ -0.01
CDT1-201ENST00000301019 CDC14AQ9UNH5 594 aa15.01□□□□□ -0.01
CDT1-201ENST00000301019 TBC1D30Q9Y2I9 924 aa15.01□□□□□ -0.01
CDT1-201ENST00000301019 CLUHO75153 1309 aa15□□□□□ -0.01
CDT1-201ENST00000301019 FUOMA2VDF0 154 aa15□□□□□ -0.01
CDT1-201ENST00000301019 F8W8V4 182 aa15□□□□□ -0.01
CDT1-201ENST00000301019 COPEO14579 308 aa15□□□□□ -0.01
CDT1-201ENST00000301019 STRNO43815 780 aa15□□□□□ -0.01
CDT1-201ENST00000301019 GGPS1O95749 300 aa15□□□□□ -0.01
CDT1-201ENST00000301019 CFHP08603 1231 aa15□□□□□ -0.01
CDT1-201ENST00000301019 MX2P20592 715 aa15□□□□□ -0.01
CDT1-201ENST00000301019 PRKD1Q15139 912 aaPredicted RBP15□□□□□ -0.01
CDT1-201ENST00000301019 FAXCQ5TGI0 409 aa15□□□□□ -0.01
CDT1-201ENST00000301019 C12orf60Q5U649 245 aa15□□□□□ -0.01
CDT1-201ENST00000301019 METTL21CQ5VZV1 264 aa15□□□□□ -0.01
CDT1-201ENST00000301019 POTEHQ6S545 545 aa15□□□□□ -0.01
CDT1-201ENST00000301019 PGBD4Q96DM1 585 aa15□□□□□ -0.01
CDT1-201ENST00000301019 THAP11Q96EK4 314 aa15□□□□□ -0.01
CDT1-201ENST00000301019 TUBB6Q9BUF5 446 aa15□□□□□ -0.01
CDT1-201ENST00000301019 RSL24D1Q9UHA3 163 aaKnown RBP15□□□□□ -0.01
CDT1-201ENST00000301019 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15□□□□□ -0.01
CDT1-201ENST00000301019 DENND3A2RUS2 1198 aa15□□□□□ -0.01
CDT1-201ENST00000301019 FKBP6O75344 327 aa15□□□□□ -0.01
CDT1-201ENST00000301019 FMO1Q01740 532 aa15□□□□□ -0.01
CDT1-201ENST00000301019 PERM1Q5SV97 790 aa15□□□□□ -0.01
CDT1-201ENST00000301019 CENPUQ71F23 418 aa15□□□□□ -0.01
CDT1-201ENST00000301019 NUDCD3Q8IVD9 361 aa15□□□□□ -0.01
CDT1-201ENST00000301019 FAM178BQ8IXR5 827 aa15□□□□□ -0.01
CDT1-201ENST00000301019 CBWD1Q9BRT8 395 aa15□□□□□ -0.01
CDT1-201ENST00000301019 COL1A1P02452 1464 aaPredicted RBP15□□□□□ -0.01
CDT1-201ENST00000301019 TRIM49D1C9J1S8 452 aa15□□□□□ -0.01
CDT1-201ENST00000301019 E9PBE3 544 aa15□□□□□ -0.01
CDT1-201ENST00000301019 STX16-NPEPL1H3BU86 382 aa15□□□□□ -0.01
CDT1-201ENST00000301019 DCXO43602 365 aa15□□□□□ -0.01
CDT1-201ENST00000301019 KLHL41O60662 606 aa15□□□□□ -0.01
CDT1-201ENST00000301019 INHBAP08476 426 aa15□□□□□ -0.01
CDT1-201ENST00000301019 SOX11P35716 441 aa15□□□□□ -0.01
CDT1-201ENST00000301019 PHEXP78562 749 aa15□□□□□ -0.01
CDT1-201ENST00000301019 GNA12Q03113 381 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms