RNA–Protein interactions for RNA: ENST00000300862.7

HIF3A-204, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HIF3A, Length 2,551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-204ENST00000300862 PPP1R12AO14974 1030 aaPredicted RBP13.49□□□□□ -0.25
HIF3A-204ENST00000300862 CILPO75339 1184 aa13.49□□□□□ -0.25
HIF3A-204ENST00000300862 DDNO94850 711 aaPredicted RBP13.49□□□□□ -0.25
HIF3A-204ENST00000300862 TRUB2O95900 331 aaKnown RBP13.49□□□□□ -0.25
HIF3A-204ENST00000300862 CYP3A5P20815 502 aa13.49□□□□□ -0.25
HIF3A-204ENST00000300862 TARSP26639 723 aaKnown RBP13.49□□□□□ -0.25
HIF3A-204ENST00000300862 GPD2P43304 727 aa13.49□□□□□ -0.25
HIF3A-204ENST00000300862 CDH6P55285 790 aa13.49□□□□□ -0.25
HIF3A-204ENST00000300862 ATP11AP98196 1134 aa13.49□□□□□ -0.25
HIF3A-204ENST00000300862 PDK4Q16654 411 aa13.49□□□□□ -0.25
HIF3A-204ENST00000300862 ATP11CQ8NB49 1132 aa13.49□□□□□ -0.25
HIF3A-204ENST00000300862 RNF19AQ9NV58 838 aa13.49□□□□□ -0.25
HIF3A-204ENST00000300862 SLC17A7Q9P2U7 560 aa13.49□□□□□ -0.25
HIF3A-204ENST00000300862 RBPJLQ9UBG7 517 aa13.49□□□□□ -0.25
HIF3A-204ENST00000300862 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.49□□□□□ -0.25
HIF3A-204ENST00000300862 SMG5Q9UPR3 1016 aaKnown RBP13.49□□□□□ -0.25
HIF3A-204ENST00000300862 CHKBQ9Y259 395 aa13.49□□□□□ -0.25
HIF3A-204ENST00000300862 WDR90Q96KV7 1748 aa13.49□□□□□ -0.25
HIF3A-204ENST00000300862 BRCA1P38398 1863 aaKnown RBP13.48□□□□□ -0.25
HIF3A-204ENST00000300862 GAS2O43903 313 aaKnown RBP13.48□□□□□ -0.25
HIF3A-204ENST00000300862 INSRRP14616 1297 aa13.48□□□□□ -0.25
HIF3A-204ENST00000300862 NBPF20Q3BBV1 942 aa13.48□□□□□ -0.25
HIF3A-204ENST00000300862 SLC10A6Q3KNW5 377 aa13.48□□□□□ -0.25
HIF3A-204ENST00000300862 CCDC62Q6P9F0 684 aa13.48□□□□□ -0.25
HIF3A-204ENST00000300862 DARS2Q6PI48 645 aaKnown RBP13.48□□□□□ -0.25
HIF3A-204ENST00000300862 ASRGL1Q7L266 308 aa13.48□□□□□ -0.25
HIF3A-204ENST00000300862 PCGF5Q86SE9 256 aa13.48□□□□□ -0.25
HIF3A-204ENST00000300862 VSIG1Q86XK7 387 aa13.48□□□□□ -0.25
HIF3A-204ENST00000300862 TTC13Q8NBP0 860 aa13.48□□□□□ -0.25
HIF3A-204ENST00000300862 CMASQ8NFW8 434 aaPredicted RBP13.48□□□□□ -0.25
HIF3A-204ENST00000300862 CXorf38Q8TB03 319 aa13.48□□□□□ -0.25
HIF3A-204ENST00000300862 FNIP1Q8TF40 1166 aa13.48□□□□□ -0.25
HIF3A-204ENST00000300862 HPDLQ96IR7 371 aa13.48□□□□□ -0.25
HIF3A-204ENST00000300862 CXCL16Q9H2A7 254 aa13.48□□□□□ -0.25
HIF3A-204ENST00000300862 BATF3Q9NR55 127 aa13.48□□□□□ -0.25
HIF3A-204ENST00000300862 ARHGEF3Q9NR81 526 aa13.48□□□□□ -0.25
HIF3A-204ENST00000300862 SLC5A4Q9NY91 659 aa13.48□□□□□ -0.25
HIF3A-204ENST00000300862 SLC24A2Q9UI40 661 aa13.48□□□□□ -0.25
HIF3A-204ENST00000300862 PPP2R3BQ9Y5P8 575 aa13.48□□□□□ -0.25
HIF3A-204ENST00000300862 E5RJQ4 531 aa13.48□□□□□ -0.25
HIF3A-204ENST00000300862 MCF2LO15068 1137 aa13.48□□□□□ -0.25
HIF3A-204ENST00000300862 EDF1O60869 148 aaKnown RBP13.48□□□□□ -0.25
HIF3A-204ENST00000300862 ELK3P41970 407 aa13.48□□□□□ -0.25
HIF3A-204ENST00000300862 NDST1P52848 882 aa13.48□□□□□ -0.25
HIF3A-204ENST00000300862 OVGP1Q12889 678 aa13.48□□□□□ -0.25
HIF3A-204ENST00000300862 MOGSQ13724 837 aa13.48□□□□□ -0.25
HIF3A-204ENST00000300862 DPYSL3Q14195 570 aa13.48□□□□□ -0.25
HIF3A-204ENST00000300862 KCTD2Q14681 263 aa13.48□□□□□ -0.25
HIF3A-204ENST00000300862 TAZQ16635 292 aa13.48□□□□□ -0.25
HIF3A-204ENST00000300862 FAXCQ5TGI0 409 aa13.48□□□□□ -0.25
HIF3A-204ENST00000300862 OR6B2Q6IFH4 312 aa13.48□□□□□ -0.25
HIF3A-204ENST00000300862 SCYL2Q6P3W7 929 aa13.48□□□□□ -0.25
HIF3A-204ENST00000300862 TCP10LQ8TDR4 215 aa13.48□□□□□ -0.25
HIF3A-204ENST00000300862 RXFP2Q8WXD0 754 aa13.48□□□□□ -0.25
HIF3A-204ENST00000300862 ZNF75CPQ92670 426 aaPredicted RBP13.48□□□□□ -0.25
HIF3A-204ENST00000300862 GRAMD1AQ96CP6 724 aa13.48□□□□□ -0.25
HIF3A-204ENST00000300862 MMP19Q99542 508 aa13.48□□□□□ -0.25
HIF3A-204ENST00000300862 MAF1Q9H063 256 aa13.48□□□□□ -0.25
HIF3A-204ENST00000300862 SMARCAD1Q9H4L7 1026 aa13.48□□□□□ -0.25
HIF3A-204ENST00000300862 HAO1Q9UJM8 370 aa13.48□□□□□ -0.25
HIF3A-204ENST00000300862 AKT3Q9Y243 479 aa13.48□□□□□ -0.25
HIF3A-204ENST00000300862 STARD13Q9Y3M8 1113 aa13.48□□□□□ -0.25
HIF3A-204ENST00000300862 CENPFP49454 3210 aa13.48□□□□□ -0.25
HIF3A-204ENST00000300862 PTPRFP10586 1907 aa13.48□□□□□ -0.25
HIF3A-204ENST00000300862 ANK1P16157 1881 aa13.47□□□□□ -0.25
HIF3A-204ENST00000300862 APOC4-APOC2K7ER74 178 aa13.47□□□□□ -0.25
HIF3A-204ENST00000300862 MAGEB2O15479 319 aa13.47□□□□□ -0.25
HIF3A-204ENST00000300862 HBP1O60381 514 aa13.47□□□□□ -0.25
HIF3A-204ENST00000300862 IL18RAPO95256 599 aa13.47□□□□□ -0.25
HIF3A-204ENST00000300862 C22orf31O95567 290 aa13.47□□□□□ -0.25
HIF3A-204ENST00000300862 APOC2P02655 101 aa13.47□□□□□ -0.25
HIF3A-204ENST00000300862 PDGFRAP16234 1089 aa13.47□□□□□ -0.25
HIF3A-204ENST00000300862 MSH2P43246 934 aa13.47□□□□□ -0.25
HIF3A-204ENST00000300862 GRIK3Q13003 919 aa13.47□□□□□ -0.25
HIF3A-204ENST00000300862 ZNF449Q6P9G9 518 aa13.47□□□□□ -0.25
HIF3A-204ENST00000300862 OTOAQ7RTW8 1153 aa13.47□□□□□ -0.25
HIF3A-204ENST00000300862 PDIK1LQ8N165 341 aa13.47□□□□□ -0.25
HIF3A-204ENST00000300862 CCDC33Q8N5R6 958 aa13.47□□□□□ -0.25
HIF3A-204ENST00000300862 MCRS1Q96EZ8 462 aa13.47□□□□□ -0.25
HIF3A-204ENST00000300862 PDZD7Q9H5P4 517 aa13.47□□□□□ -0.25
HIF3A-204ENST00000300862 PRDM16Q9HAZ2 1276 aa13.47□□□□□ -0.25
HIF3A-204ENST00000300862 NPHS2Q9NP85 383 aa13.47□□□□□ -0.25
HIF3A-204ENST00000300862 DCTN4Q9UJW0 460 aa13.47□□□□□ -0.25
HIF3A-204ENST00000300862 ZMYND8Q9ULU4 1186 aaPredicted RBP13.47□□□□□ -0.25
HIF3A-204ENST00000300862 EFR3BQ9Y2G0 817 aa13.47□□□□□ -0.25
HIF3A-204ENST00000300862 H7C0C1 242 aa13.47□□□□□ -0.25
HIF3A-204ENST00000300862 UNC5CO95185 931 aa13.47□□□□□ -0.25
HIF3A-204ENST00000300862 ARF4P18085 180 aaPredicted RBP13.47□□□□□ -0.25
HIF3A-204ENST00000300862 CCND1P24385 295 aa13.47□□□□□ -0.25
HIF3A-204ENST00000300862 PHBP35232 272 aa13.47□□□□□ -0.25
HIF3A-204ENST00000300862 ATP5OP48047 213 aa13.47□□□□□ -0.25
HIF3A-204ENST00000300862 ACVR2BQ13705 512 aa13.47□□□□□ -0.25
HIF3A-204ENST00000300862 SEPT7Q16181 437 aaKnown RBP13.47□□□□□ -0.25
HIF3A-204ENST00000300862 FAM183BPQ6ZVS7 135 aa13.47□□□□□ -0.25
HIF3A-204ENST00000300862 CYP4V2Q6ZWL3 525 aaPredicted RBP13.47□□□□□ -0.25
HIF3A-204ENST00000300862 DCAKDQ8WVC6 231 aa13.47□□□□□ -0.25
HIF3A-204ENST00000300862 SPDL1Q96EA4 605 aa13.47□□□□□ -0.25
HIF3A-204ENST00000300862 LRRC37BQ96QE4 947 aa13.47□□□□□ -0.25
HIF3A-204ENST00000300862 ACSS3Q9H6R3 686 aa13.47□□□□□ -0.25
HIF3A-204ENST00000300862 SENP1Q9P0U3 644 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms