RNA–Protein interactions for RNA: ENST00000290650.8

UBR1-201, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR1, Length 7,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-201ENST00000290650 AGBL2Q5U5Z8 902 aa4.98□□□□□ -1.61
UBR1-201ENST00000290650 NOTUMQ6P988 496 aa4.98□□□□□ -1.61
UBR1-201ENST00000290650 DDX27Q96GQ7 796 aaKnown RBP4.98□□□□□ -1.61
UBR1-201ENST00000290650 CALR3Q96L12 384 aaKnown RBP4.98□□□□□ -1.61
UBR1-201ENST00000290650 MANSC1Q9H8J5 431 aa4.98□□□□□ -1.61
UBR1-201ENST00000290650 PRMT7Q9NVM4 692 aaPredicted RBP4.98□□□□□ -1.61
UBR1-201ENST00000290650 HEY2Q9UBP5 337 aa4.98□□□□□ -1.61
UBR1-201ENST00000290650 PACSIN3Q9UKS6 424 aa4.98□□□□□ -1.61
UBR1-201ENST00000290650 GOLGA8QA0A0J9YX86 632 aa4.98□□□□□ -1.61
UBR1-201ENST00000290650 GOLGA8OA6NCC3 632 aa4.98□□□□□ -1.61
UBR1-201ENST00000290650 GOLGA8NF8WBI6 632 aa4.98□□□□□ -1.61
UBR1-201ENST00000290650 AGPSO00116 658 aa4.98□□□□□ -1.61
UBR1-201ENST00000290650 RPA3P35244 121 aaPredicted RBP4.98□□□□□ -1.61
UBR1-201ENST00000290650 SERPINB5P36952 375 aa4.98□□□□□ -1.61
UBR1-201ENST00000290650 CAPSQ13938 189 aa4.98□□□□□ -1.61
UBR1-201ENST00000290650 USP10Q14694 798 aaKnown RBP4.98□□□□□ -1.61
UBR1-201ENST00000290650 EEF1DP3Q658K8 133 aa4.98□□□□□ -1.61
UBR1-201ENST00000290650 METTL7BQ6UX53 244 aa4.98□□□□□ -1.61
UBR1-201ENST00000290650 IFNEQ86WN2 208 aa4.98□□□□□ -1.61
UBR1-201ENST00000290650 PPIL6Q8IXY8 311 aa4.98□□□□□ -1.61
UBR1-201ENST00000290650 ADGRF2Q8IZF7 708 aa4.98□□□□□ -1.61
UBR1-201ENST00000290650 NUP93Q8N1F7 819 aa4.98□□□□□ -1.61
UBR1-201ENST00000290650 GABPB2Q8TAK5 448 aaPredicted RBP4.98□□□□□ -1.61
UBR1-201ENST00000290650 PAFAH2Q99487 392 aa4.98□□□□□ -1.61
UBR1-201ENST00000290650 CXorf56Q9H5V9 222 aa4.98□□□□□ -1.61
UBR1-201ENST00000290650 R3HDM2Q9Y2K5 976 aaKnown RBP4.98□□□□□ -1.61
UBR1-201ENST00000290650 PCDHGC5Q9Y5F6 944 aa4.98□□□□□ -1.61
UBR1-201ENST00000290650 UTRNP46939 3433 aa4.97□□□□□ -1.61
UBR1-201ENST00000290650 MAFGO15525 162 aa4.97□□□□□ -1.61
UBR1-201ENST00000290650 PJA2O43164 708 aa4.97□□□□□ -1.61
UBR1-201ENST00000290650 USP17L7P0C7H9 530 aa4.97□□□□□ -1.61
UBR1-201ENST00000290650 MAPTP10636 758 aaKnown RBP4.97□□□□□ -1.61
UBR1-201ENST00000290650 PRLRP16471 622 aa4.97□□□□□ -1.61
UBR1-201ENST00000290650 MIPP30301 263 aa4.97□□□□□ -1.61
UBR1-201ENST00000290650 ELK3P41970 407 aa4.97□□□□□ -1.61
UBR1-201ENST00000290650 GEMIN4P57678 1058 aaKnown RBP4.97□□□□□ -1.61
UBR1-201ENST00000290650 RBBP7Q16576 425 aa4.97□□□□□ -1.61
UBR1-201ENST00000290650 CDKL3Q8IVW4 592 aaPredicted RBP4.97□□□□□ -1.61
UBR1-201ENST00000290650 PRELID2Q8N945 189 aa4.97□□□□□ -1.61
UBR1-201ENST00000290650 TNIP3Q96KP6 325 aa4.97□□□□□ -1.61
UBR1-201ENST00000290650 ADARB2Q9NS39 739 aaKnown RBP4.97□□□□□ -1.61
UBR1-201ENST00000290650 NOP53Q9NZM5 478 aaKnown RBP4.97□□□□□ -1.61
UBR1-201ENST00000290650 LRP6O75581 1613 aa4.97□□□□□ -1.61
UBR1-201ENST00000290650 FDX1P10109 184 aa4.97□□□□□ -1.61
UBR1-201ENST00000290650 GARTP22102 1010 aa4.97□□□□□ -1.61
UBR1-201ENST00000290650 DNAJB2P25686 324 aa4.97□□□□□ -1.61
UBR1-201ENST00000290650 ELF1P32519 619 aa4.97□□□□□ -1.61
UBR1-201ENST00000290650 MAMLD1Q13495 774 aa4.97□□□□□ -1.61
UBR1-201ENST00000290650 FASTKD3Q14CZ7 662 aaKnown RBP4.97□□□□□ -1.61
UBR1-201ENST00000290650 SGO1Q5FBB7 561 aa4.97□□□□□ -1.61
UBR1-201ENST00000290650 SDHAF4Q5VUM1 108 aa4.97□□□□□ -1.61
UBR1-201ENST00000290650 SZRD1Q7Z422 152 aa4.97□□□□□ -1.61
UBR1-201ENST00000290650 RPAINQ86UA6 219 aa4.97□□□□□ -1.61
UBR1-201ENST00000290650 VSIG10LQ86VR7 867 aa4.97□□□□□ -1.61
UBR1-201ENST00000290650 ERO1BQ86YB8 467 aa4.97□□□□□ -1.61
UBR1-201ENST00000290650 GALNT4Q8N4A0 578 aa4.97□□□□□ -1.61
UBR1-201ENST00000290650 RAET1EQ8TD07 263 aa4.97□□□□□ -1.61
UBR1-201ENST00000290650 SLC2A14Q8TDB8 520 aa4.97□□□□□ -1.61
UBR1-201ENST00000290650 TFB1MQ8WVM0 346 aaKnown RBP4.97□□□□□ -1.61
UBR1-201ENST00000290650 MTFR1LQ9H019 292 aa4.97□□□□□ -1.61
UBR1-201ENST00000290650 TRPV6Q9H1D0 765 aa4.97□□□□□ -1.61
UBR1-201ENST00000290650 WDCPQ9H6R7 721 aa4.97□□□□□ -1.61
UBR1-201ENST00000290650 NINJ2Q9NZG7 142 aa4.97□□□□□ -1.61
UBR1-201ENST00000290650 BFARQ9NZS9 450 aa4.97□□□□□ -1.61
UBR1-201ENST00000290650 PCDHA3Q9Y5H8 950 aa4.97□□□□□ -1.61
UBR1-201ENST00000290650 RPS6KL1Q9Y6S9 549 aa4.97□□□□□ -1.61
UBR1-201ENST00000290650 WDR27A2RRH5 827 aa4.97□□□□□ -1.61
UBR1-201ENST00000290650 SYNDIG1LA6NDD5 238 aa4.97□□□□□ -1.61
UBR1-201ENST00000290650 NVLO15381 856 aaKnown RBP4.97□□□□□ -1.61
UBR1-201ENST00000290650 ZC3H11AO75152 810 aaKnown RBP eCLIP4.97□□□□□ -1.61
UBR1-201ENST00000290650 UBTFL6P0CB48 400 aaPredicted RBP4.97□□□□□ -1.61
UBR1-201ENST00000290650 SNHG28P0DPA3 235 aa4.97□□□□□ -1.61
UBR1-201ENST00000290650 EEF1B2P24534 225 aaKnown RBP4.97□□□□□ -1.61
UBR1-201ENST00000290650 CYP2F1P24903 491 aa4.97□□□□□ -1.61
UBR1-201ENST00000290650 RPS12P25398 132 aaKnown RBP4.97□□□□□ -1.61
UBR1-201ENST00000290650 LAMC2Q13753 1193 aa4.97□□□□□ -1.61
UBR1-201ENST00000290650 POU6F1Q14863 301 aa4.97□□□□□ -1.61
UBR1-201ENST00000290650 TAF5Q15542 800 aa4.97□□□□□ -1.61
UBR1-201ENST00000290650 ATPAF2Q8N5M1 289 aa4.97□□□□□ -1.61
UBR1-201ENST00000290650 REPS2Q8NFH8 660 aa4.97□□□□□ -1.61
UBR1-201ENST00000290650 CAVIN3Q969G5 261 aa4.97□□□□□ -1.61
UBR1-201ENST00000290650 ZBED2Q9BTP6 218 aa4.97□□□□□ -1.61
UBR1-201ENST00000290650 HPS4Q9NQG7 708 aa4.97□□□□□ -1.61
UBR1-201ENST00000290650 NDFIP2Q9NV92 336 aa4.97□□□□□ -1.61
UBR1-201ENST00000290650 IL18RAPO95256 599 aa4.97□□□□□ -1.61
UBR1-201ENST00000290650 CBX6O95503 412 aa4.97□□□□□ -1.61
UBR1-201ENST00000290650 FAM200BP0CF97 657 aa4.97□□□□□ -1.61
UBR1-201ENST00000290650 GHRP10912 638 aa4.97□□□□□ -1.61
UBR1-201ENST00000290650 RPL10AP62906 217 aaKnown RBP4.97□□□□□ -1.61
UBR1-201ENST00000290650 TAP1Q03518 808 aa4.97□□□□□ -1.61
UBR1-201ENST00000290650 FRA10AC1Q70Z53 315 aa4.97□□□□□ -1.61
UBR1-201ENST00000290650 MAP4K3Q8IVH8 894 aa4.97□□□□□ -1.61
UBR1-201ENST00000290650 SPATA6LQ8N4H0 392 aa4.97□□□□□ -1.61
UBR1-201ENST00000290650 STKLD1Q8NE28 680 aa4.97□□□□□ -1.61
UBR1-201ENST00000290650 PTPRN2Q92932 1015 aa4.97□□□□□ -1.61
UBR1-201ENST00000290650 C18orf25Q96B23 403 aaPredicted RBP4.97□□□□□ -1.61
UBR1-201ENST00000290650 MARK4Q96L34 752 aa4.97□□□□□ -1.61
UBR1-201ENST00000290650 FGD4Q96M96 766 aa4.97□□□□□ -1.61
UBR1-201ENST00000290650 CNTNAP2Q9UHC6 1331 aa4.97□□□□□ -1.61
UBR1-201ENST00000290650 B2RBV5 119 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms