RNA–Protein interactions for RNA: ENST00000290330.7

SNF8-201, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SNF8, Length 951 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-201ENST00000290330 CCDC34Q96HJ3 373 aa11.12□□□□□ -0.63
SNF8-201ENST00000290330 SLITRK1Q96PX8 696 aa11.12□□□□□ -0.63
SNF8-201ENST00000290330 RNF38Q9H0F5 515 aa11.12□□□□□ -0.63
SNF8-201ENST00000290330 LINC00597Q9H2U6 94 aa11.12□□□□□ -0.63
SNF8-201ENST00000290330 ECT2Q9H8V3 914 aa11.12□□□□□ -0.63
SNF8-201ENST00000290330 FBRSL1Q9HCM7 1045 aaKnown RBP11.12□□□□□ -0.63
SNF8-201ENST00000290330 C2orf42Q9NWW7 574 aa11.12□□□□□ -0.63
SNF8-201ENST00000290330 WNT6Q9Y6F9 365 aa11.12□□□□□ -0.63
SNF8-201ENST00000290330 KIF26AQ9ULI4 1882 aaPredicted RBP11.12□□□□□ -0.63
SNF8-201ENST00000290330 TNFRSF10BO14763 440 aa11.11□□□□□ -0.63
SNF8-201ENST00000290330 ABL1P00519 1130 aa11.11□□□□□ -0.63
SNF8-201ENST00000290330 OAS1P00973 400 aaKnown RBP11.11□□□□□ -0.63
SNF8-201ENST00000290330 TRIM49P0CI25 452 aa11.11□□□□□ -0.63
SNF8-201ENST00000290330 TRIM49CP0CI26 452 aa11.11□□□□□ -0.63
SNF8-201ENST00000290330 KRT13P13646 458 aa11.11□□□□□ -0.63
SNF8-201ENST00000290330 YWHAQP27348 245 aa11.11□□□□□ -0.63
SNF8-201ENST00000290330 GJA4P35212 333 aa11.11□□□□□ -0.63
SNF8-201ENST00000290330 DEKP35659 375 aaKnown RBP11.11□□□□□ -0.63
SNF8-201ENST00000290330 PIK3CAP42336 1068 aa11.11□□□□□ -0.63
SNF8-201ENST00000290330 IFNAR2P48551 515 aa11.11□□□□□ -0.63
SNF8-201ENST00000290330 GALK1P51570 392 aa11.11□□□□□ -0.63
SNF8-201ENST00000290330 NDST1P52848 882 aa11.11□□□□□ -0.63
SNF8-201ENST00000290330 MCCD1P59942 119 aaPredicted RBP11.11□□□□□ -0.63
SNF8-201ENST00000290330 SLC7A9P82251 487 aa11.11□□□□□ -0.63
SNF8-201ENST00000290330 ENPEPQ07075 957 aa11.11□□□□□ -0.63
SNF8-201ENST00000290330 IFRD2Q12894 506 aaPredicted RBP11.11□□□□□ -0.63
SNF8-201ENST00000290330 ORC1Q13415 861 aa11.11□□□□□ -0.63
SNF8-201ENST00000290330 PNOCQ13519 176 aa11.11□□□□□ -0.63
SNF8-201ENST00000290330 EML3Q32P44 896 aa11.11□□□□□ -0.63
SNF8-201ENST00000290330 EDRF1Q3B7T1 1238 aa11.11□□□□□ -0.63
SNF8-201ENST00000290330 NAIF1Q69YI7 327 aaPredicted RBP11.11□□□□□ -0.63
SNF8-201ENST00000290330 UNC93AQ86WB7 457 aa11.11□□□□□ -0.63
SNF8-201ENST00000290330 SMYD4Q8IYR2 804 aaPredicted RBP11.11□□□□□ -0.63
SNF8-201ENST00000290330 KIAA2013Q8IYS2 634 aa11.11□□□□□ -0.63
SNF8-201ENST00000290330 CPA6Q8N4T0 437 aa11.11□□□□□ -0.63
SNF8-201ENST00000290330 ENGASEQ8NFI3 743 aa11.11□□□□□ -0.63
SNF8-201ENST00000290330 TAS1R2Q8TE23 839 aa11.11□□□□□ -0.63
SNF8-201ENST00000290330 ATP2A3Q93084 1043 aa11.11□□□□□ -0.63
SNF8-201ENST00000290330 SMARCD1Q96GM5 515 aa11.11□□□□□ -0.63
SNF8-201ENST00000290330 HINFPQ9BQA5 517 aa11.11□□□□□ -0.63
SNF8-201ENST00000290330 MED10Q9BTT4 135 aa11.11□□□□□ -0.63
SNF8-201ENST00000290330 APOBEC3GQ9HC16 384 aaKnown RBP11.11□□□□□ -0.63
SNF8-201ENST00000290330 DMAP1Q9NPF5 467 aaPredicted RBP11.11□□□□□ -0.63
SNF8-201ENST00000290330 HMGXB4Q9UGU5 601 aa11.11□□□□□ -0.63
SNF8-201ENST00000290330 SMG5Q9UPR3 1016 aaKnown RBP11.11□□□□□ -0.63
SNF8-201ENST00000290330 PTPRDP23468 1912 aa11.11□□□□□ -0.63
SNF8-201ENST00000290330 GREB1Q4ZG55 1949 aa11.11□□□□□ -0.63
SNF8-201ENST00000290330 ATP8B3O60423 1300 aa11.1□□□□□ -0.63
SNF8-201ENST00000290330 GOLGA6L4A6NEF3 574 aa11.1□□□□□ -0.63
SNF8-201ENST00000290330 CHURC1-FNTBB4DL54 471 aa11.1□□□□□ -0.63
SNF8-201ENST00000290330 LEFTY2O00292 366 aa11.1□□□□□ -0.63
SNF8-201ENST00000290330 AP1G2O75843 785 aa11.1□□□□□ -0.63
SNF8-201ENST00000290330 BEST1O76090 585 aa11.1□□□□□ -0.63
SNF8-201ENST00000290330 RTN3O95197 1032 aaPredicted RBP11.1□□□□□ -0.63
SNF8-201ENST00000290330 EGFP01133 1207 aa11.1□□□□□ -0.63
SNF8-201ENST00000290330 CCDC130P13994 396 aa11.1□□□□□ -0.63
SNF8-201ENST00000290330 DRD1P21728 446 aa11.1□□□□□ -0.63
SNF8-201ENST00000290330 HOXA6P31267 233 aa11.1□□□□□ -0.63
SNF8-201ENST00000290330 HOXC13P31276 330 aa11.1□□□□□ -0.63
SNF8-201ENST00000290330 FNTBP49356 437 aa11.1□□□□□ -0.63
SNF8-201ENST00000290330 SLC5A3P53794 718 aa11.1□□□□□ -0.63
SNF8-201ENST00000290330 DMWDQ09019 674 aa11.1□□□□□ -0.63
SNF8-201ENST00000290330 PKN3Q6P5Z2 889 aa11.1□□□□□ -0.63
SNF8-201ENST00000290330 KIAA1958Q8N8K9 716 aa11.1□□□□□ -0.63
SNF8-201ENST00000290330 C12orf29Q8N999 325 aa11.1□□□□□ -0.63
SNF8-201ENST00000290330 PDZD8Q8NEN9 1154 aa11.1□□□□□ -0.63
SNF8-201ENST00000290330 ZMIZ2Q8NF64 920 aa11.1□□□□□ -0.63
SNF8-201ENST00000290330 SCAMP5Q8TAC9 235 aa11.1□□□□□ -0.63
SNF8-201ENST00000290330 SLC2A14Q8TDB8 520 aa11.1□□□□□ -0.63
SNF8-201ENST00000290330 OVCA2Q8WZ82 227 aa11.1□□□□□ -0.63
SNF8-201ENST00000290330 FBXO32Q969P5 355 aa11.1□□□□□ -0.63
SNF8-201ENST00000290330 EEF2KMTQ96G04 330 aa11.1□□□□□ -0.63
SNF8-201ENST00000290330 GSDMAQ96QA5 445 aa11.1□□□□□ -0.63
SNF8-201ENST00000290330 SMOQ99835 787 aa11.1□□□□□ -0.63
SNF8-201ENST00000290330 P2RY13Q9BPV8 354 aa11.1□□□□□ -0.63
SNF8-201ENST00000290330 IMPG2Q9BZV3 1241 aa11.1□□□□□ -0.63
SNF8-201ENST00000290330 MMRN2Q9H8L6 949 aa11.1□□□□□ -0.63
SNF8-201ENST00000290330 CSNK1G1Q9HCP0 422 aa11.1□□□□□ -0.63
SNF8-201ENST00000290330 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.1□□□□□ -0.63
SNF8-201ENST00000290330 KRT82Q9NSB4 513 aa11.1□□□□□ -0.63
SNF8-201ENST00000290330 RMND1Q9NWS8 449 aa11.1□□□□□ -0.63
SNF8-201ENST00000290330 SMPD4Q9NXE4 827 aa11.1□□□□□ -0.63
SNF8-201ENST00000290330 IL37Q9NZH6 218 aa11.1□□□□□ -0.63
SNF8-201ENST00000290330 NCDNQ9UBB6 729 aa11.1□□□□□ -0.63
SNF8-201ENST00000290330 CHORDC1Q9UHD1 332 aaPredicted RBP11.1□□□□□ -0.63
SNF8-201ENST00000290330 CPQQ9Y646 472 aa11.1□□□□□ -0.63
SNF8-201ENST00000290330 GPR179Q6PRD1 2367 aa11.1□□□□□ -0.63
SNF8-201ENST00000290330 CFAP54Q96N23 3096 aa11.1□□□□□ -0.63
SNF8-201ENST00000290330 ANAPC1Q9H1A4 1944 aa11.09□□□□□ -0.63
SNF8-201ENST00000290330 EP300Q09472 2414 aaPredicted RBP11.09□□□□□ -0.63
SNF8-201ENST00000290330 GVINP1Q7Z2Y8 2422 aa11.09□□□□□ -0.63
SNF8-201ENST00000290330 DMDP11532 3685 aa11.09□□□□□ -0.63
SNF8-201ENST00000290330 FAM92AA1XBS5 289 aa11.09□□□□□ -0.63
SNF8-201ENST00000290330 HRO43593 1189 aa11.09□□□□□ -0.63
SNF8-201ENST00000290330 ATG13O75143 517 aa11.09□□□□□ -0.63
SNF8-201ENST00000290330 RNF40O75150 1001 aa11.09□□□□□ -0.63
SNF8-201ENST00000290330 GTF2H1P32780 548 aa11.09□□□□□ -0.63
SNF8-201ENST00000290330 PRCPP42785 496 aa11.09□□□□□ -0.63
SNF8-201ENST00000290330 INCA1Q0VD86 236 aa11.09□□□□□ -0.63
SNF8-201ENST00000290330 NR1H3Q13133 447 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms