RNA–Protein interactions for RNA: ENST00000287766.8

SLC6A1-201, Transcript of solute carrier family 6 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A1, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-201ENST00000287766 FAM96AQ9H5X1 160 aa13.04□□□□□ -0.32
SLC6A1-201ENST00000287766 MANSC1Q9H8J5 431 aa13.04□□□□□ -0.32
SLC6A1-201ENST00000287766 A1CFQ9NQ94 594 aaKnown RBP13.04□□□□□ -0.32
SLC6A1-201ENST00000287766 RIPK3Q9Y572 518 aa13.04□□□□□ -0.32
SLC6A1-201ENST00000287766 DISP2A7MBM2 1401 aa13.04□□□□□ -0.32
SLC6A1-201ENST00000287766 KPNA7A9QM74 516 aa13.04□□□□□ -0.32
SLC6A1-201ENST00000287766 H0Y626 953 aa13.04□□□□□ -0.32
SLC6A1-201ENST00000287766 TPST1O60507 370 aa13.04□□□□□ -0.32
SLC6A1-201ENST00000287766 TRIM16O95361 564 aa13.04□□□□□ -0.32
SLC6A1-201ENST00000287766 NUMBP49757 651 aa13.04□□□□□ -0.32
SLC6A1-201ENST00000287766 JAM2P57087 298 aa13.04□□□□□ -0.32
SLC6A1-201ENST00000287766 KCNJ2P63252 427 aa13.04□□□□□ -0.32
SLC6A1-201ENST00000287766 TAF1BQ53T94 588 aaPredicted RBP13.04□□□□□ -0.32
SLC6A1-201ENST00000287766 PGBD4Q96DM1 585 aa13.04□□□□□ -0.32
SLC6A1-201ENST00000287766 SLC10A4Q96EP9 437 aa13.04□□□□□ -0.32
SLC6A1-201ENST00000287766 CPB2Q96IY4 423 aa13.04□□□□□ -0.32
SLC6A1-201ENST00000287766 CGRRF1Q99675 332 aa13.04□□□□□ -0.32
SLC6A1-201ENST00000287766 CBX6O95503 412 aa13.03□□□□□ -0.32
SLC6A1-201ENST00000287766 NAMPTP43490 491 aa13.03□□□□□ -0.32
SLC6A1-201ENST00000287766 GCNT1Q02742 428 aa13.03□□□□□ -0.32
SLC6A1-201ENST00000287766 YWHAHQ04917 246 aaPredicted RBP13.03□□□□□ -0.32
SLC6A1-201ENST00000287766 STX3Q13277 289 aa13.03□□□□□ -0.32
SLC6A1-201ENST00000287766 DPY19L2Q6NUT2 758 aa13.03□□□□□ -0.32
SLC6A1-201ENST00000287766 PRPF39Q86UA1 669 aaKnown RBP13.03□□□□□ -0.32
SLC6A1-201ENST00000287766 APOBEC3FQ8IUX4 373 aaKnown RBP13.03□□□□□ -0.32
SLC6A1-201ENST00000287766 FBXO16Q8IX29 292 aaPredicted RBP13.03□□□□□ -0.32
SLC6A1-201ENST00000287766 CATSPER1Q8NEC5 780 aa13.03□□□□□ -0.32
SLC6A1-201ENST00000287766 GIPC2Q8TF65 315 aa13.03□□□□□ -0.32
SLC6A1-201ENST00000287766 BSNDQ8WZ55 320 aa13.03□□□□□ -0.32
SLC6A1-201ENST00000287766 NDEL1Q9GZM8 345 aa13.03□□□□□ -0.32
SLC6A1-201ENST00000287766 SLCO1B3Q9NPD5 702 aa13.03□□□□□ -0.32
SLC6A1-201ENST00000287766 C2CD2Q9Y426 696 aa13.03□□□□□ -0.32
SLC6A1-201ENST00000287766 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.03□□□□□ -0.32
SLC6A1-201ENST00000287766 SHOX2O60902 331 aaPredicted RBP13.03□□□□□ -0.32
SLC6A1-201ENST00000287766 DGKIO75912 1065 aa13.03□□□□□ -0.32
SLC6A1-201ENST00000287766 FSBPO95073 299 aa13.03□□□□□ -0.32
SLC6A1-201ENST00000287766 CLPTM1O96005 669 aa13.03□□□□□ -0.32
SLC6A1-201ENST00000287766 AP3M2P53677 418 aa13.03□□□□□ -0.32
SLC6A1-201ENST00000287766 ITIH4Q14624 930 aa13.03□□□□□ -0.32
SLC6A1-201ENST00000287766 TDRD10Q5VZ19 366 aaKnown RBP13.03□□□□□ -0.32
SLC6A1-201ENST00000287766 ACOT1Q86TX2 421 aa13.03□□□□□ -0.32
SLC6A1-201ENST00000287766 ASAP3Q8TDY4 903 aa13.03□□□□□ -0.32
SLC6A1-201ENST00000287766 CYGBQ8WWM9 190 aa13.03□□□□□ -0.32
SLC6A1-201ENST00000287766 KCNK16Q96T55 309 aa13.03□□□□□ -0.32
SLC6A1-201ENST00000287766 YDJCA8MPS7 323 aa13.03□□□□□ -0.32
SLC6A1-201ENST00000287766 VTNP04004 478 aa13.03□□□□□ -0.32
SLC6A1-201ENST00000287766 GJB1P08034 283 aa13.03□□□□□ -0.32
SLC6A1-201ENST00000287766 TNFSF9P41273 254 aa13.03□□□□□ -0.32
SLC6A1-201ENST00000287766 SWT1Q5T5J6 900 aaKnown RBP13.03□□□□□ -0.32
SLC6A1-201ENST00000287766 ARL10Q8N8L6 244 aa13.03□□□□□ -0.32
SLC6A1-201ENST00000287766 CEP41Q9BYV8 373 aa13.03□□□□□ -0.32
SLC6A1-201ENST00000287766 TRIM15Q9C019 465 aa13.03□□□□□ -0.32
SLC6A1-201ENST00000287766 KIAA1683Q9H0B3 1180 aa13.03□□□□□ -0.32
SLC6A1-201ENST00000287766 GID8Q9NWU2 228 aa13.03□□□□□ -0.32
SLC6A1-201ENST00000287766 PKD2L2Q9NZM6 624 aa13.03□□□□□ -0.32
SLC6A1-201ENST00000287766 KLK14Q9P0G3 267 aa13.03□□□□□ -0.32
SLC6A1-201ENST00000287766 PCYOX1Q9UHG3 505 aa13.03□□□□□ -0.32
SLC6A1-201ENST00000287766 C19orf81C9J6K1 198 aa13.03□□□□□ -0.32
SLC6A1-201ENST00000287766 HUS1O60921 280 aa13.03□□□□□ -0.32
SLC6A1-201ENST00000287766 LGR5O75473 907 aa13.03□□□□□ -0.32
SLC6A1-201ENST00000287766 SERPINB1P30740 379 aa13.03□□□□□ -0.32
SLC6A1-201ENST00000287766 ALDH5A1P51649 535 aaPredicted RBP13.03□□□□□ -0.32
SLC6A1-201ENST00000287766 TNFAIP2Q03169 654 aa13.03□□□□□ -0.32
SLC6A1-201ENST00000287766 GJC2Q5T442 439 aaPredicted RBP13.03□□□□□ -0.32
SLC6A1-201ENST00000287766 CCDC117Q8IWD4 279 aaPredicted RBP13.03□□□□□ -0.32
SLC6A1-201ENST00000287766 RASGEF1CQ8N431 466 aa13.03□□□□□ -0.32
SLC6A1-201ENST00000287766 AGAP11Q8TF27 550 aa13.03□□□□□ -0.32
SLC6A1-201ENST00000287766 CASP10Q92851 521 aa13.03□□□□□ -0.32
SLC6A1-201ENST00000287766 MAGEB18Q96M61 343 aa13.03□□□□□ -0.32
SLC6A1-201ENST00000287766 ZNF142P52746 1687 aaPredicted RBP13.03□□□□□ -0.32
SLC6A1-201ENST00000287766 GRIN2DO15399 1336 aa13.03□□□□□ -0.32
SLC6A1-201ENST00000287766 RARBP10826 455 aa13.02□□□□□ -0.32
SLC6A1-201ENST00000287766 IL10P22301 178 aa13.02□□□□□ -0.32
SLC6A1-201ENST00000287766 IER5Q5VY09 327 aa13.02□□□□□ -0.32
SLC6A1-201ENST00000287766 ARMCX6Q7L4S7 300 aa13.02□□□□□ -0.32
SLC6A1-201ENST00000287766 ADCK1Q86TW2 530 aa13.02□□□□□ -0.32
SLC6A1-201ENST00000287766 SLC9A9Q8IVB4 645 aa13.02□□□□□ -0.32
SLC6A1-201ENST00000287766 C20orf96Q9NUD7 363 aaPredicted RBP13.02□□□□□ -0.32
SLC6A1-201ENST00000287766 TMA7Q9Y2S6 64 aaKnown RBP13.02□□□□□ -0.32
SLC6A1-201ENST00000287766 UBIAD1Q9Y5Z9 338 aa13.02□□□□□ -0.32
SLC6A1-201ENST00000287766 M0R3G1 203 aa13.02□□□□□ -0.33
SLC6A1-201ENST00000287766 NPTXRO95502 500 aa13.02□□□□□ -0.33
SLC6A1-201ENST00000287766 KPNA2P52292 529 aaKnown RBP13.02□□□□□ -0.33
SLC6A1-201ENST00000287766 ARHGDIAP52565 204 aa13.02□□□□□ -0.33
SLC6A1-201ENST00000287766 TRIM60Q495X7 471 aa13.02□□□□□ -0.33
SLC6A1-201ENST00000287766 DSTYKQ6XUX3 929 aa13.02□□□□□ -0.33
SLC6A1-201ENST00000287766 RNF135Q8IUD6 432 aa13.02□□□□□ -0.33
SLC6A1-201ENST00000287766 DAW1Q8N136 415 aa13.02□□□□□ -0.33
SLC6A1-201ENST00000287766 C3orf20Q8ND61 904 aa13.02□□□□□ -0.33
SLC6A1-201ENST00000287766 RDM1Q8NG50 284 aa13.02□□□□□ -0.33
SLC6A1-201ENST00000287766 PRPF18Q99633 342 aaKnown RBP13.02□□□□□ -0.33
SLC6A1-201ENST00000287766 DTNAQ9Y4J8 743 aa13.02□□□□□ -0.33
SLC6A1-201ENST00000287766 PDE4DIPQ5VU43 2346 aa13.02□□□□□ -0.33
SLC6A1-201ENST00000287766 XPOTO43592 962 aaKnown RBP13.02□□□□□ -0.33
SLC6A1-201ENST00000287766 ZNF189O75820 626 aaPredicted RBP13.02□□□□□ -0.33
SLC6A1-201ENST00000287766 GPD1P21695 349 aa13.02□□□□□ -0.33
SLC6A1-201ENST00000287766 ADRA1DP25100 572 aa13.02□□□□□ -0.33
SLC6A1-201ENST00000287766 MAMLD1Q13495 774 aa13.02□□□□□ -0.33
SLC6A1-201ENST00000287766 GOLGA7BQ2TAP0 167 aa13.02□□□□□ -0.33
SLC6A1-201ENST00000287766 RINLQ6ZS11 566 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms