RNA–Protein interactions for RNA: ENST00000284767.9

PDLIM3-201, Transcript of PDZ and LIM domain 3, humanhuman

TSL 5 BASIC

Gene PDLIM3, Length 2,589 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-201ENST00000284767 ZCCHC9Q8N567 271 aaKnown RBP19.18■□□□□ 0.66
PDLIM3-201ENST00000284767 CFAP57Q96MR6 1250 aa19.18■□□□□ 0.66
PDLIM3-201ENST00000284767 PWWP2AQ96N64 755 aa19.18■□□□□ 0.66
PDLIM3-201ENST00000284767 APOL6Q9BWW8 343 aa19.18■□□□□ 0.66
PDLIM3-201ENST00000284767 BCO2Q9BYV7 579 aa19.18■□□□□ 0.66
PDLIM3-201ENST00000284767 ASB7Q9H672 318 aa19.18■□□□□ 0.66
PDLIM3-201ENST00000284767 FAM155AB1AL88 458 aaPredicted RBP19.18■□□□□ 0.66
PDLIM3-201ENST00000284767 VPS41P49754 854 aa19.18■□□□□ 0.66
PDLIM3-201ENST00000284767 RAD23BP54727 409 aa19.18■□□□□ 0.66
PDLIM3-201ENST00000284767 TRABD2AQ86V40 505 aa19.18■□□□□ 0.66
PDLIM3-201ENST00000284767 TDRPQ86YL5 185 aa19.18■□□□□ 0.66
PDLIM3-201ENST00000284767 TEX9Q8N6V9 391 aa19.18■□□□□ 0.66
PDLIM3-201ENST00000284767 ERP27Q96DN0 273 aa19.18■□□□□ 0.66
PDLIM3-201ENST00000284767 HPDLQ96IR7 371 aa19.18■□□□□ 0.66
PDLIM3-201ENST00000284767 C9orf72Q96LT7 481 aa19.18■□□□□ 0.66
PDLIM3-201ENST00000284767 LRRC37BQ96QE4 947 aa19.18■□□□□ 0.66
PDLIM3-201ENST00000284767 ELOVL4Q9GZR5 314 aa19.18■□□□□ 0.66
PDLIM3-201ENST00000284767 RNPEPL1Q9HAU8 725 aa19.18■□□□□ 0.66
PDLIM3-201ENST00000284767 PHTF1Q9UMS5 762 aa19.18■□□□□ 0.66
PDLIM3-201ENST00000284767 MBLAC1A4D2B0 266 aaPredicted RBP19.17■□□□□ 0.66
PDLIM3-201ENST00000284767 PSTPIP1O43586 416 aa19.17■□□□□ 0.66
PDLIM3-201ENST00000284767 ALDH3A1P30838 453 aa19.17■□□□□ 0.66
PDLIM3-201ENST00000284767 RGS2P41220 211 aa19.17■□□□□ 0.66
PDLIM3-201ENST00000284767 SSR1P43307 286 aaKnown RBP19.17■□□□□ 0.66
PDLIM3-201ENST00000284767 MAGEA4P43358 317 aa19.17■□□□□ 0.66
PDLIM3-201ENST00000284767 GRIK3Q13003 919 aa19.17■□□□□ 0.66
PDLIM3-201ENST00000284767 SPARCL1Q14515 664 aa19.17■□□□□ 0.66
PDLIM3-201ENST00000284767 SPDYAQ5MJ70 313 aa19.17■□□□□ 0.66
PDLIM3-201ENST00000284767 TRPV1Q8NER1 839 aa19.17■□□□□ 0.66
PDLIM3-201ENST00000284767 DENND1AQ8TEH3 1009 aa19.17■□□□□ 0.66
PDLIM3-201ENST00000284767 GCOM2Q9BZD3 368 aaPredicted RBP19.17■□□□□ 0.66
PDLIM3-201ENST00000284767 NXF3Q9H4D5 531 aaKnown RBP19.17■□□□□ 0.66
PDLIM3-201ENST00000284767 KLHL11Q9NVR0 708 aa19.17■□□□□ 0.66
PDLIM3-201ENST00000284767 DPP3Q9NY33 737 aa19.17■□□□□ 0.66
PDLIM3-201ENST00000284767 HGSO14964 777 aaPredicted RBP19.17■□□□□ 0.66
PDLIM3-201ENST00000284767 PROSCO94903 275 aa19.17■□□□□ 0.66
PDLIM3-201ENST00000284767 RALAP11233 206 aa19.17■□□□□ 0.66
PDLIM3-201ENST00000284767 GNAZP19086 355 aa19.17■□□□□ 0.66
PDLIM3-201ENST00000284767 CALB2P22676 271 aa19.17■□□□□ 0.66
PDLIM3-201ENST00000284767 AKAP5P24588 427 aa19.17■□□□□ 0.66
PDLIM3-201ENST00000284767 C1QBPQ07021 282 aaKnown RBP19.17■□□□□ 0.66
PDLIM3-201ENST00000284767 TAF11Q15544 211 aa19.17■□□□□ 0.66
PDLIM3-201ENST00000284767 SLC4A11Q8NBS3 891 aa19.17■□□□□ 0.66
PDLIM3-201ENST00000284767 NAF1Q96HR8 494 aaKnown RBP19.17■□□□□ 0.66
PDLIM3-201ENST00000284767 TTC25Q96NG3 672 aa19.17■□□□□ 0.66
PDLIM3-201ENST00000284767 MCEEQ96PE7 176 aa19.17■□□□□ 0.66
PDLIM3-201ENST00000284767 RBM15Q96T37 977 aaKnown RBP eCLIP19.17■□□□□ 0.66
PDLIM3-201ENST00000284767 SENP1Q9P0U3 644 aa19.17■□□□□ 0.66
PDLIM3-201ENST00000284767 SMG5Q9UPR3 1016 aaKnown RBP19.17■□□□□ 0.66
PDLIM3-201ENST00000284767 CHKBQ9Y259 395 aa19.17■□□□□ 0.66
PDLIM3-201ENST00000284767 ADCY1Q08828 1119 aa19.16■□□□□ 0.66
PDLIM3-201ENST00000284767 ATP13A4Q4VNC1 1196 aa19.16■□□□□ 0.66
PDLIM3-201ENST00000284767 ANKS1BQ7Z6G8 1248 aa19.16■□□□□ 0.66
PDLIM3-201ENST00000284767 APBA2Q99767 749 aa19.16■□□□□ 0.66
PDLIM3-201ENST00000284767 ZFYVE28Q9HCC9 887 aa19.16■□□□□ 0.66
PDLIM3-201ENST00000284767 LRRC42Q9Y546 428 aa19.16■□□□□ 0.66
PDLIM3-201ENST00000284767 EXOC1LA0A1B0GW35 172 aa19.16■□□□□ 0.66
PDLIM3-201ENST00000284767 KLRC2P26717 231 aa19.16■□□□□ 0.66
PDLIM3-201ENST00000284767 RASSF2P50749 326 aa19.16■□□□□ 0.66
PDLIM3-201ENST00000284767 ADAM17P78536 824 aa19.16■□□□□ 0.66
PDLIM3-201ENST00000284767 OGDHQ02218 1023 aa19.16■□□□□ 0.66
PDLIM3-201ENST00000284767 ZNF252P-AS1Q0IIN9 211 aa19.16■□□□□ 0.66
PDLIM3-201ENST00000284767 PAXIP1Q6ZW49 1069 aaPredicted RBP19.16■□□□□ 0.66
PDLIM3-201ENST00000284767 TMEM35BQ8NCS4 154 aa19.16■□□□□ 0.66
PDLIM3-201ENST00000284767 MICAL1Q8TDZ2 1067 aa19.16■□□□□ 0.66
PDLIM3-201ENST00000284767 C18orf25Q96B23 403 aaPredicted RBP19.16■□□□□ 0.66
PDLIM3-201ENST00000284767 PAIP2Q9BPZ3 127 aaKnown RBP19.16■□□□□ 0.66
PDLIM3-201ENST00000284767 AP5M1Q9H0R1 490 aa19.16■□□□□ 0.66
PDLIM3-201ENST00000284767 TUBGCP4Q9UGJ1 667 aa19.16■□□□□ 0.66
PDLIM3-201ENST00000284767 SCN1AP35498 2009 aa19.15■□□□□ 0.66
PDLIM3-201ENST00000284767 SMIM35A0A1B0GVV1 85 aa19.15■□□□□ 0.66
PDLIM3-201ENST00000284767 SKAP2O75563 359 aaPredicted RBP19.15■□□□□ 0.66
PDLIM3-201ENST00000284767 DARSP14868 501 aaKnown RBP19.15■□□□□ 0.66
PDLIM3-201ENST00000284767 GRM5P41594 1212 aa19.15■□□□□ 0.66
PDLIM3-201ENST00000284767 PDK4Q16654 411 aa19.15■□□□□ 0.66
PDLIM3-201ENST00000284767 PTPN20Q4JDL3 420 aa19.15■□□□□ 0.66
PDLIM3-201ENST00000284767 CMPK2Q5EBM0 449 aa19.15■□□□□ 0.66
PDLIM3-201ENST00000284767 RHOT1Q8IXI2 618 aa19.15■□□□□ 0.66
PDLIM3-201ENST00000284767 ARMC2Q8NEN0 867 aa19.15■□□□□ 0.66
PDLIM3-201ENST00000284767 FEZF2Q8TBJ5 459 aa19.15■□□□□ 0.66
PDLIM3-201ENST00000284767 VCPIP1Q96JH7 1222 aa19.15■□□□□ 0.66
PDLIM3-201ENST00000284767 FAM118BQ9BPY3 351 aa19.15■□□□□ 0.66
PDLIM3-201ENST00000284767 HEMGNQ9BXL5 484 aa19.15■□□□□ 0.66
PDLIM3-201ENST00000284767 KLK14Q9P0G3 267 aa19.15■□□□□ 0.66
PDLIM3-201ENST00000284767 RPL26L1Q9UNX3 145 aaKnown RBP19.15■□□□□ 0.66
PDLIM3-201ENST00000284767 GOLGA8SH3BPF8 625 aa19.15■□□□□ 0.66
PDLIM3-201ENST00000284767 HAS3O00219 553 aa19.15■□□□□ 0.66
PDLIM3-201ENST00000284767 KIF3CO14782 793 aa19.15■□□□□ 0.66
PDLIM3-201ENST00000284767 C6orf222P0C671 652 aaPredicted RBP19.15■□□□□ 0.66
PDLIM3-201ENST00000284767 GCKP35557 465 aa19.15■□□□□ 0.66
PDLIM3-201ENST00000284767 SATB1Q01826 763 aa19.15■□□□□ 0.66
PDLIM3-201ENST00000284767 DNAJC3Q13217 504 aa19.15■□□□□ 0.66
PDLIM3-201ENST00000284767 FSCN1Q16658 493 aaKnown RBP19.15■□□□□ 0.66
PDLIM3-201ENST00000284767 KATNAL2Q8IYT4 538 aa19.15■□□□□ 0.66
PDLIM3-201ENST00000284767 SH3TC2Q8TF17 1288 aa19.15■□□□□ 0.66
PDLIM3-201ENST00000284767 STK32AQ8WU08 396 aa19.15■□□□□ 0.66
PDLIM3-201ENST00000284767 SLC24A3Q9HC58 644 aa19.15■□□□□ 0.66
PDLIM3-201ENST00000284767 MRPL47Q9HD33 250 aaKnown RBP19.15■□□□□ 0.66
PDLIM3-201ENST00000284767 PARVAQ9NVD7 372 aa19.15■□□□□ 0.66
PDLIM3-201ENST00000284767 ABT1Q9ULW3 272 aaKnown RBP19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms