RNA–Protein interactions for RNA: ENST00000282841.9

GGPS1-201, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGPS1, Length 2,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-201ENST00000282841 NRLP54845 237 aa11.53□□□□□ -0.56
GGPS1-201ENST00000282841 ARPP19P56211 112 aa11.53□□□□□ -0.56
GGPS1-201ENST00000282841 TUSC3Q13454 348 aa11.53□□□□□ -0.56
GGPS1-201ENST00000282841 ZC3H12AQ5D1E8 599 aaKnown RBP11.53□□□□□ -0.56
GGPS1-201ENST00000282841 TMEM173Q86WV6 379 aaPredicted RBP11.53□□□□□ -0.56
GGPS1-201ENST00000282841 PGLYRP2Q96PD5 576 aa11.53□□□□□ -0.56
GGPS1-201ENST00000282841 CALN1Q9BXU9 219 aa11.53□□□□□ -0.56
GGPS1-201ENST00000282841 OSBPL8Q9BZF1 889 aa11.53□□□□□ -0.56
GGPS1-201ENST00000282841 EYSQ5T1H1 3165 aa11.53□□□□□ -0.56
GGPS1-201ENST00000282841 CSPG5O95196 566 aa11.52□□□□□ -0.57
GGPS1-201ENST00000282841 SLC1A1P43005 524 aa11.52□□□□□ -0.57
GGPS1-201ENST00000282841 ITIH3Q06033 890 aa11.52□□□□□ -0.57
GGPS1-201ENST00000282841 FAAP100Q0VG06 881 aa11.52□□□□□ -0.57
GGPS1-201ENST00000282841 BST2Q10589 180 aaKnown RBP11.52□□□□□ -0.57
GGPS1-201ENST00000282841 ZNF268Q14587 947 aaPredicted RBP11.52□□□□□ -0.57
GGPS1-201ENST00000282841 CASP8Q14790 479 aa11.52□□□□□ -0.57
GGPS1-201ENST00000282841 CCDC14Q49A88 953 aa11.52□□□□□ -0.57
GGPS1-201ENST00000282841 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.52□□□□□ -0.57
GGPS1-201ENST00000282841 CLEC20AQ6ZU45 233 aa11.52□□□□□ -0.57
GGPS1-201ENST00000282841 TOP6BLQ8N6T0 577 aa11.52□□□□□ -0.57
GGPS1-201ENST00000282841 GPR152Q8TDT2 470 aa11.52□□□□□ -0.57
GGPS1-201ENST00000282841 PGBD4Q96DM1 585 aa11.52□□□□□ -0.57
GGPS1-201ENST00000282841 CCDC114Q96M63 670 aa11.52□□□□□ -0.57
GGPS1-201ENST00000282841 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.52□□□□□ -0.57
GGPS1-201ENST00000282841 TARSL2A2RTX5 802 aaKnown RBP11.52□□□□□ -0.57
GGPS1-201ENST00000282841 GABRDO14764 452 aa11.52□□□□□ -0.57
GGPS1-201ENST00000282841 AP1G2O75843 785 aa11.52□□□□□ -0.57
GGPS1-201ENST00000282841 WARSP23381 471 aaKnown RBP11.52□□□□□ -0.57
GGPS1-201ENST00000282841 PLA2G4AP47712 749 aa11.52□□□□□ -0.57
GGPS1-201ENST00000282841 RAB27AP51159 221 aa11.52□□□□□ -0.57
GGPS1-201ENST00000282841 NOMO2Q5JPE7 1267 aa11.52□□□□□ -0.57
GGPS1-201ENST00000282841 ICE2Q659A1 982 aa11.52□□□□□ -0.57
GGPS1-201ENST00000282841 OTUD6BQ8N6M0 293 aa11.52□□□□□ -0.57
GGPS1-201ENST00000282841 TSEN2Q8NCE0 465 aaKnown RBP11.52□□□□□ -0.57
GGPS1-201ENST00000282841 TNIP3Q96KP6 325 aa11.52□□□□□ -0.57
GGPS1-201ENST00000282841 SLC4A5Q9BY07 1137 aa11.52□□□□□ -0.57
GGPS1-201ENST00000282841 PRDM5Q9NQX1 630 aaPredicted RBP11.52□□□□□ -0.57
GGPS1-201ENST00000282841 DNAJC17Q9NVM6 304 aaKnown RBP11.52□□□□□ -0.57
GGPS1-201ENST00000282841 KIAA1257Q9ULG3 409 aa11.52□□□□□ -0.57
GGPS1-201ENST00000282841 FRMPD3Q5JV73 1810 aa11.52□□□□□ -0.57
GGPS1-201ENST00000282841 GOLGA6L10A0A0M3HER8 536 aa11.51□□□□□ -0.57
GGPS1-201ENST00000282841 C2CD4BA6NLJ0 364 aa11.51□□□□□ -0.57
GGPS1-201ENST00000282841 NRP1O14786 923 aa11.51□□□□□ -0.57
GGPS1-201ENST00000282841 ERLIN1O75477 346 aa11.51□□□□□ -0.57
GGPS1-201ENST00000282841 SOAT2O75908 522 aa11.51□□□□□ -0.57
GGPS1-201ENST00000282841 USP17L7P0C7H9 530 aa11.51□□□□□ -0.57
GGPS1-201ENST00000282841 ETS1P14921 441 aa11.51□□□□□ -0.57
GGPS1-201ENST00000282841 GABRB2P47870 512 aa11.51□□□□□ -0.57
GGPS1-201ENST00000282841 SLC6A3Q01959 620 aa11.51□□□□□ -0.57
GGPS1-201ENST00000282841 SLC25A11Q02978 314 aaKnown RBP11.51□□□□□ -0.57
GGPS1-201ENST00000282841 GRIK3Q13003 919 aa11.51□□□□□ -0.57
GGPS1-201ENST00000282841 PIGHQ14442 188 aaPredicted RBP11.51□□□□□ -0.57
GGPS1-201ENST00000282841 CA9Q16790 459 aa11.51□□□□□ -0.57
GGPS1-201ENST00000282841 UBAP2Q5T6F2 1119 aaKnown RBP11.51□□□□□ -0.57
GGPS1-201ENST00000282841 SLC39A5Q6ZMH5 540 aa11.51□□□□□ -0.57
GGPS1-201ENST00000282841 LIMS2Q7Z4I7 341 aa11.51□□□□□ -0.57
GGPS1-201ENST00000282841 JAMLQ86YT9 394 aa11.51□□□□□ -0.57
GGPS1-201ENST00000282841 GLIS1Q8NBF1 620 aa11.51□□□□□ -0.57
GGPS1-201ENST00000282841 FAM172AQ8WUF8 416 aa11.51□□□□□ -0.57
GGPS1-201ENST00000282841 RSPH1Q8WYR4 309 aa11.51□□□□□ -0.57
GGPS1-201ENST00000282841 PAWRQ96IZ0 340 aaKnown RBP11.51□□□□□ -0.57
GGPS1-201ENST00000282841 PWWP2AQ96N64 755 aa11.51□□□□□ -0.57
GGPS1-201ENST00000282841 SLITRK1Q96PX8 696 aa11.51□□□□□ -0.57
GGPS1-201ENST00000282841 SMOQ99835 787 aa11.51□□□□□ -0.57
GGPS1-201ENST00000282841 OGDHLQ9ULD0 1010 aa11.51□□□□□ -0.57
GGPS1-201ENST00000282841 USP18Q9UMW8 372 aa11.51□□□□□ -0.57
GGPS1-201ENST00000282841 MYO7AQ13402 2215 aa11.51□□□□□ -0.57
GGPS1-201ENST00000282841 POLR3GO15318 223 aaPredicted RBP11.51□□□□□ -0.57
GGPS1-201ENST00000282841 ZSCAN5DPP0CG00 497 aa11.51□□□□□ -0.57
GGPS1-201ENST00000282841 GPD1P21695 349 aa11.51□□□□□ -0.57
GGPS1-201ENST00000282841 ITGB8P26012 769 aa11.51□□□□□ -0.57
GGPS1-201ENST00000282841 LBX1P52954 281 aa11.51□□□□□ -0.57
GGPS1-201ENST00000282841 BCAT1P54687 386 aa11.51□□□□□ -0.57
GGPS1-201ENST00000282841 MTM1Q13496 603 aa11.51□□□□□ -0.57
GGPS1-201ENST00000282841 PPP6R3Q5H9R7 873 aaPredicted RBP11.51□□□□□ -0.57
GGPS1-201ENST00000282841 SYPL2Q5VXT5 272 aa11.51□□□□□ -0.57
GGPS1-201ENST00000282841 TMEM110Q86TL2 294 aa11.51□□□□□ -0.57
GGPS1-201ENST00000282841 IFT20Q8IY31 132 aa11.51□□□□□ -0.57
GGPS1-201ENST00000282841 ABI1Q8IZP0 508 aa11.51□□□□□ -0.57
GGPS1-201ENST00000282841 ZMIZ2Q8NF64 920 aa11.51□□□□□ -0.57
GGPS1-201ENST00000282841 SCAMP5Q8TAC9 235 aa11.51□□□□□ -0.57
GGPS1-201ENST00000282841 EDEM1Q92611 657 aa11.51□□□□□ -0.57
GGPS1-201ENST00000282841 MYLPFQ96A32 169 aa11.51□□□□□ -0.57
GGPS1-201ENST00000282841 FAXDC2Q96IV6 333 aa11.51□□□□□ -0.57
GGPS1-201ENST00000282841 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.51□□□□□ -0.57
GGPS1-201ENST00000282841 NUDT5Q9UKK9 219 aa11.51□□□□□ -0.57
GGPS1-201ENST00000282841 TTC7AQ9ULT0 858 aaPredicted RBP11.51□□□□□ -0.57
GGPS1-201ENST00000282841 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.5□□□□□ -0.57
GGPS1-201ENST00000282841 PHF2O75151 1096 aa11.5□□□□□ -0.57
GGPS1-201ENST00000282841 NPR3P17342 541 aa11.5□□□□□ -0.57
GGPS1-201ENST00000282841 COILP38432 576 aaPredicted RBP11.5□□□□□ -0.57
GGPS1-201ENST00000282841 TKTL1P51854 596 aa11.5□□□□□ -0.57
GGPS1-201ENST00000282841 PLTPP55058 493 aa11.5□□□□□ -0.57
GGPS1-201ENST00000282841 PRMT2P55345 433 aa11.5□□□□□ -0.57
GGPS1-201ENST00000282841 PLCB3Q01970 1234 aa11.5□□□□□ -0.57
GGPS1-201ENST00000282841 DCAF6Q58WW2 860 aa11.5□□□□□ -0.57
GGPS1-201ENST00000282841 ARHGAP17Q68EM7 881 aa11.5□□□□□ -0.57
GGPS1-201ENST00000282841 OVOS1Q6IE37 1185 aa11.5□□□□□ -0.57
GGPS1-201ENST00000282841 NPNTQ6UXI9 565 aa11.5□□□□□ -0.57
GGPS1-201ENST00000282841 KCTD6Q8NC69 237 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms