RNA–Protein interactions for RNA: ENST00000277817.10

HERC4-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,371 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-201ENST00000277817 FRMD7Q6ZUT3 714 aa3.08□□□□□ -1.92
HERC4-201ENST00000277817 STOX1Q6ZVD7 989 aa3.08□□□□□ -1.92
HERC4-201ENST00000277817 NEK8Q86SG6 692 aa3.08□□□□□ -1.92
HERC4-201ENST00000277817 EGFL6Q8IUX8 553 aa3.08□□□□□ -1.92
HERC4-201ENST00000277817 TBC1D10CQ8IV04 446 aa3.08□□□□□ -1.92
HERC4-201ENST00000277817 CYB5D2Q8WUJ1 264 aa3.08□□□□□ -1.92
HERC4-201ENST00000277817 NMD3Q96D46 503 aaKnown RBP3.08□□□□□ -1.92
HERC4-201ENST00000277817 CCDC51Q96ER9 411 aa3.08□□□□□ -1.92
HERC4-201ENST00000277817 TUBGCP2Q9BSJ2 902 aa3.08□□□□□ -1.92
HERC4-201ENST00000277817 WDR18Q9BV38 432 aa3.08□□□□□ -1.92
HERC4-201ENST00000277817 CERS4Q9HA82 394 aa3.08□□□□□ -1.92
HERC4-201ENST00000277817 KCNK9Q9NPC2 374 aa3.08□□□□□ -1.92
HERC4-201ENST00000277817 STK32BQ9NY57 414 aa3.08□□□□□ -1.92
HERC4-201ENST00000277817 SEL1LQ9UBV2 794 aa3.08□□□□□ -1.92
HERC4-201ENST00000277817 RASAL2Q9UJF2 1139 aa3.08□□□□□ -1.92
HERC4-201ENST00000277817 PLAGL2Q9UPG8 496 aa3.08□□□□□ -1.92
HERC4-201ENST00000277817 INVSQ9Y283 1065 aa3.08□□□□□ -1.92
HERC4-201ENST00000277817 ZNF711Q9Y462 761 aa3.08□□□□□ -1.92
HERC4-201ENST00000277817 PCDHB1Q9Y5F3 818 aa3.08□□□□□ -1.92
HERC4-201ENST00000277817 ADARB2-AS1A8MUL3 147 aa3.08□□□□□ -1.92
HERC4-201ENST00000277817 NDUFAB1O14561 156 aa3.08□□□□□ -1.92
HERC4-201ENST00000277817 TERTO14746 1132 aaKnown RBP3.08□□□□□ -1.92
HERC4-201ENST00000277817 CALUO43852 315 aaPredicted RBP3.08□□□□□ -1.92
HERC4-201ENST00000277817 EXOC3O60645 756 aa3.08□□□□□ -1.92
HERC4-201ENST00000277817 ZIC2O95409 532 aaPredicted RBP3.08□□□□□ -1.92
HERC4-201ENST00000277817 CST3P01034 146 aaPredicted RBP3.08□□□□□ -1.92
HERC4-201ENST00000277817 EPHA1P21709 976 aa3.08□□□□□ -1.92
HERC4-201ENST00000277817 ACTN2P35609 894 aa3.08□□□□□ -1.92
HERC4-201ENST00000277817 ITGA8P53708 1063 aa3.08□□□□□ -1.92
HERC4-201ENST00000277817 HSD17B7P56937 341 aa3.08□□□□□ -1.92
HERC4-201ENST00000277817 SLC14A1Q13336 389 aa3.08□□□□□ -1.92
HERC4-201ENST00000277817 EPHA7Q15375 998 aa3.08□□□□□ -1.92
HERC4-201ENST00000277817 ARL13BQ3SXY8 428 aa3.08□□□□□ -1.92
HERC4-201ENST00000277817 CFAP221Q4G0U5 840 aa3.08□□□□□ -1.92
HERC4-201ENST00000277817 VWA3BQ502W6 1294 aa3.08□□□□□ -1.92
HERC4-201ENST00000277817 PITRM1Q5JRX3 1037 aa3.08□□□□□ -1.92
HERC4-201ENST00000277817 CCDC91Q7Z6B0 441 aa3.08□□□□□ -1.92
HERC4-201ENST00000277817 TSPYL5Q86VY4 417 aaPredicted RBP3.08□□□□□ -1.92
HERC4-201ENST00000277817 IFT20Q8IY31 132 aa3.08□□□□□ -1.92
HERC4-201ENST00000277817 MYOCDQ8IZQ8 938 aa3.08□□□□□ -1.92
HERC4-201ENST00000277817 SLC35F6Q8N357 371 aa3.08□□□□□ -1.92
HERC4-201ENST00000277817 CCDC26Q8TAB7 109 aa3.08□□□□□ -1.92
HERC4-201ENST00000277817 TBC1D22AQ8WUA7 517 aa3.08□□□□□ -1.92
HERC4-201ENST00000277817 CD244Q9BZW8 370 aa3.08□□□□□ -1.92
HERC4-201ENST00000277817 CCDC68Q9H2F9 335 aa3.08□□□□□ -1.92
HERC4-201ENST00000277817 SRPRBQ9Y5M8 271 aaKnown RBP3.08□□□□□ -1.92
HERC4-201ENST00000277817 ARHGEF35A5YM69 484 aa3.08□□□□□ -1.92
HERC4-201ENST00000277817 H0Y626 953 aa3.08□□□□□ -1.92
HERC4-201ENST00000277817 SLC16A6O15403 523 aa3.08□□□□□ -1.92
HERC4-201ENST00000277817 SPOPO43791 374 aa3.08□□□□□ -1.92
HERC4-201ENST00000277817 MAN1A2O60476 641 aa3.08□□□□□ -1.92
HERC4-201ENST00000277817 NMT2O60551 498 aa3.08□□□□□ -1.92
HERC4-201ENST00000277817 PLEKHA8P1O95397 391 aa3.08□□□□□ -1.92
HERC4-201ENST00000277817 CYP17A1P05093 508 aa3.08□□□□□ -1.92
HERC4-201ENST00000277817 MYBP10242 640 aa3.08□□□□□ -1.92
HERC4-201ENST00000277817 LAMP2P13473 410 aa3.08□□□□□ -1.92
HERC4-201ENST00000277817 LCP1P13796 627 aa3.08□□□□□ -1.92
HERC4-201ENST00000277817 PORP16435 677 aaPredicted RBP3.08□□□□□ -1.92
HERC4-201ENST00000277817 ALOX12P18054 663 aa3.08□□□□□ -1.92
HERC4-201ENST00000277817 EN2P19622 333 aaPredicted RBP3.08□□□□□ -1.92
HERC4-201ENST00000277817 SLC16A2P36021 539 aa3.08□□□□□ -1.92
HERC4-201ENST00000277817 LONP1P36776 959 aaKnown RBP3.08□□□□□ -1.92
HERC4-201ENST00000277817 KPNA1P52294 538 aaPredicted RBP3.08□□□□□ -1.92
HERC4-201ENST00000277817 POLR2FP61218 127 aaKnown RBP3.08□□□□□ -1.92
HERC4-201ENST00000277817 CYP4A11Q02928 519 aa3.08□□□□□ -1.92
HERC4-201ENST00000277817 MECOMQ03112 1051 aa3.08□□□□□ -1.92
HERC4-201ENST00000277817 CALCOCO2Q13137 446 aa3.08□□□□□ -1.92
HERC4-201ENST00000277817 RPS6KA1Q15418 735 aa3.08□□□□□ -1.92
HERC4-201ENST00000277817 MAN2A1Q16706 1144 aa3.08□□□□□ -1.92
HERC4-201ENST00000277817 WSCD2Q2TBF2 565 aa3.08□□□□□ -1.92
HERC4-201ENST00000277817 MBLAC2Q68D91 279 aa3.08□□□□□ -1.92
HERC4-201ENST00000277817 CCDC149Q6ZUS6 474 aa3.08□□□□□ -1.92
HERC4-201ENST00000277817 FAM214BQ7L5A3 538 aa3.08□□□□□ -1.92
HERC4-201ENST00000277817 CATSPER4Q7RTX7 472 aa3.08□□□□□ -1.92
HERC4-201ENST00000277817 ATG9AQ7Z3C6 839 aa3.08□□□□□ -1.92
HERC4-201ENST00000277817 DEFB132Q7Z7B7 95 aa3.08□□□□□ -1.92
HERC4-201ENST00000277817 GPBP1Q86WP2 473 aa3.08□□□□□ -1.92
HERC4-201ENST00000277817 WFDC3Q8IUB2 231 aa3.08□□□□□ -1.92
HERC4-201ENST00000277817 FMR1NBQ8N0W7 255 aaPredicted RBP3.08□□□□□ -1.92
HERC4-201ENST00000277817 RUBCNQ92622 972 aa3.08□□□□□ -1.92
HERC4-201ENST00000277817 PAGE5Q96GU1 130 aa3.08□□□□□ -1.92
HERC4-201ENST00000277817 CCDC77Q9BR77 488 aa3.08□□□□□ -1.92
HERC4-201ENST00000277817 STRA6Q9BX79 667 aa3.08□□□□□ -1.92
HERC4-201ENST00000277817 SCUBE2Q9NQ36 999 aa3.08□□□□□ -1.92
HERC4-201ENST00000277817 PANK4Q9NVE7 773 aa3.08□□□□□ -1.92
HERC4-201ENST00000277817 CRIM1Q9NZV1 1036 aa3.08□□□□□ -1.92
HERC4-201ENST00000277817 PCDHA1Q9Y5I3 950 aa3.08□□□□□ -1.92
HERC4-201ENST00000277817 IKBKGQ9Y6K9 419 aa3.08□□□□□ -1.92
HERC4-201ENST00000277817 ZFP37Q9Y6Q3 630 aaPredicted RBP3.08□□□□□ -1.92
HERC4-201ENST00000277817 A0A0G2JLW4 131 aa3.07□□□□□ -1.92
HERC4-201ENST00000277817 USP27XA6NNY8 438 aa3.07□□□□□ -1.92
HERC4-201ENST00000277817 ERVV-1B6SEH8 477 aa3.07□□□□□ -1.92
HERC4-201ENST00000277817 TMEM232C9JQI7 657 aa3.07□□□□□ -1.92
HERC4-201ENST00000277817 KPNA5O15131 536 aa3.07□□□□□ -1.92
HERC4-201ENST00000277817 FANCGO15287 622 aa3.07□□□□□ -1.92
HERC4-201ENST00000277817 FOXN1O15353 648 aa3.07□□□□□ -1.92
HERC4-201ENST00000277817 ASAP2O43150 1006 aa3.07□□□□□ -1.92
HERC4-201ENST00000277817 THBDP07204 575 aa3.07□□□□□ -1.92
HERC4-201ENST00000277817 CNPP09543 421 aaKnown RBP3.07□□□□□ -1.92
HERC4-201ENST00000277817 RARBP10826 455 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms