RNA–Protein interactions for RNA: ENST00000267199.8

VPS33A-201, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33A, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-201ENST00000267199 TBC1D12O60347 775 aa11.99□□□□□ -0.49
VPS33A-201ENST00000267199 SERPINB9P50453 376 aa11.99□□□□□ -0.49
VPS33A-201ENST00000267199 MYL6P60660 151 aa11.99□□□□□ -0.49
VPS33A-201ENST00000267199 ANO4Q32M45 955 aa11.99□□□□□ -0.49
VPS33A-201ENST00000267199 HYIQ5T013 277 aa11.99□□□□□ -0.49
VPS33A-201ENST00000267199 C16orf89Q6UX73 402 aa11.99□□□□□ -0.49
VPS33A-201ENST00000267199 FITM2Q8N6M3 262 aa11.99□□□□□ -0.49
VPS33A-201ENST00000267199 PBXIP1Q96AQ6 731 aa11.99□□□□□ -0.49
VPS33A-201ENST00000267199 SLC10A4Q96EP9 437 aa11.99□□□□□ -0.49
VPS33A-201ENST00000267199 PACSIN3Q9UKS6 424 aa11.99□□□□□ -0.49
VPS33A-201ENST00000267199 SPAG6O75602 509 aa11.99□□□□□ -0.49
VPS33A-201ENST00000267199 ZFXP17010 805 aaPredicted RBP11.99□□□□□ -0.49
VPS33A-201ENST00000267199 VCAM1P19320 739 aa11.99□□□□□ -0.49
VPS33A-201ENST00000267199 MARSP56192 900 aaKnown RBP11.99□□□□□ -0.49
VPS33A-201ENST00000267199 NLRP11P59045 1033 aaKnown RBP11.99□□□□□ -0.49
VPS33A-201ENST00000267199 OR6P1Q8NGX9 317 aa11.99□□□□□ -0.49
VPS33A-201ENST00000267199 INPP5DQ92835 1189 aa11.99□□□□□ -0.49
VPS33A-201ENST00000267199 GCNAQ96QF7 691 aa11.99□□□□□ -0.49
VPS33A-201ENST00000267199 DCUN1D5Q9BTE7 237 aa11.99□□□□□ -0.49
VPS33A-201ENST00000267199 A1CFQ9NQ94 594 aaKnown RBP11.99□□□□□ -0.49
VPS33A-201ENST00000267199 DDX28Q9NUL7 540 aaKnown RBP11.99□□□□□ -0.49
VPS33A-201ENST00000267199 PDGFRBP09619 1106 aa11.99□□□□□ -0.49
VPS33A-201ENST00000267199 ATP6V1C1P21283 382 aa11.99□□□□□ -0.49
VPS33A-201ENST00000267199 USP10Q14694 798 aaKnown RBP11.99□□□□□ -0.49
VPS33A-201ENST00000267199 PGM5Q15124 567 aa11.99□□□□□ -0.49
VPS33A-201ENST00000267199 EFHC2Q5JST6 749 aa11.99□□□□□ -0.49
VPS33A-201ENST00000267199 SPOCD1Q6ZMY3 1216 aa11.99□□□□□ -0.49
VPS33A-201ENST00000267199 AGBL3Q8NEM8 1001 aa11.99□□□□□ -0.49
VPS33A-201ENST00000267199 GDPD5Q8WTR4 605 aa11.99□□□□□ -0.49
VPS33A-201ENST00000267199 ZNF606Q8WXB4 792 aa11.99□□□□□ -0.49
VPS33A-201ENST00000267199 CISHQ9NSE2 258 aa11.99□□□□□ -0.49
VPS33A-201ENST00000267199 SNX13Q9Y5W8 968 aa11.99□□□□□ -0.49
VPS33A-201ENST00000267199 E7ENQ6 273 aa11.98□□□□□ -0.49
VPS33A-201ENST00000267199 MAN1A2O60476 641 aa11.98□□□□□ -0.49
VPS33A-201ENST00000267199 LCA5LO95447 670 aa11.98□□□□□ -0.49
VPS33A-201ENST00000267199 ITGB3P05106 788 aa11.98□□□□□ -0.49
VPS33A-201ENST00000267199 SUPT20HL2P0C7V6 817 aa11.98□□□□□ -0.49
VPS33A-201ENST00000267199 ETS1P14921 441 aa11.98□□□□□ -0.49
VPS33A-201ENST00000267199 TM4SF1P30408 202 aa11.98□□□□□ -0.49
VPS33A-201ENST00000267199 TCF7P36402 384 aaPredicted RBP11.98□□□□□ -0.49
VPS33A-201ENST00000267199 NAMPTP43490 491 aa11.98□□□□□ -0.49
VPS33A-201ENST00000267199 NSUN2Q08J23 767 aaKnown RBP eCLIP11.98□□□□□ -0.49
VPS33A-201ENST00000267199 USP13Q92995 863 aaPredicted RBP11.98□□□□□ -0.49
VPS33A-201ENST00000267199 CEP19Q96LK0 163 aa11.98□□□□□ -0.49
VPS33A-201ENST00000267199 NT5C1AQ9BXI3 368 aa11.98□□□□□ -0.49
VPS33A-201ENST00000267199 FSD1LQ9BXM9 530 aa11.98□□□□□ -0.49
VPS33A-201ENST00000267199 NDUFA13Q9P0J0 144 aa11.98□□□□□ -0.49
VPS33A-201ENST00000267199 NR2E1Q9Y466 385 aa11.98□□□□□ -0.49
VPS33A-201ENST00000267199 MYH2Q9UKX2 1941 aa11.98□□□□□ -0.49
VPS33A-201ENST00000267199 LMO7Q8WWI1 1683 aa11.98□□□□□ -0.49
VPS33A-201ENST00000267199 FKBP6O75344 327 aa11.98□□□□□ -0.49
VPS33A-201ENST00000267199 CHEK2O96017 543 aa11.98□□□□□ -0.49
VPS33A-201ENST00000267199 SNHG28P0DPA3 235 aa11.98□□□□□ -0.49
VPS33A-201ENST00000267199 DPEP1P16444 411 aa11.98□□□□□ -0.49
VPS33A-201ENST00000267199 GPD1P21695 349 aa11.98□□□□□ -0.49
VPS33A-201ENST00000267199 ELK3P41970 407 aa11.98□□□□□ -0.49
VPS33A-201ENST00000267199 GMPSP49915 693 aaPredicted RBP11.98□□□□□ -0.49
VPS33A-201ENST00000267199 GCNT1Q02742 428 aa11.98□□□□□ -0.49
VPS33A-201ENST00000267199 TSTA3Q13630 321 aaPredicted RBP11.98□□□□□ -0.49
VPS33A-201ENST00000267199 TTC33Q6PID6 262 aaPredicted RBP11.98□□□□□ -0.49
VPS33A-201ENST00000267199 MFSD7Q6UXD7 560 aa11.98□□□□□ -0.49
VPS33A-201ENST00000267199 FAM13CQ8NE31 585 aa11.98□□□□□ -0.49
VPS33A-201ENST00000267199 RNF139Q8WU17 664 aa11.98□□□□□ -0.49
VPS33A-201ENST00000267199 SPOCK2Q92563 424 aa11.98□□□□□ -0.49
VPS33A-201ENST00000267199 CGRRF1Q99675 332 aa11.98□□□□□ -0.49
VPS33A-201ENST00000267199 SMARCAD1Q9H4L7 1026 aa11.98□□□□□ -0.49
VPS33A-201ENST00000267199 FBXO6Q9NRD1 293 aaPredicted RBP11.98□□□□□ -0.49
VPS33A-201ENST00000267199 TSR3Q9UJK0 312 aaKnown RBP11.98□□□□□ -0.49
VPS33A-201ENST00000267199 CDY2AQ9Y6F7 541 aa11.98□□□□□ -0.49
VPS33A-201ENST00000267199 CDY1Q9Y6F8 540 aa11.98□□□□□ -0.49
VPS33A-201ENST00000267199 DPPA5A6NC42 116 aa11.98□□□□□ -0.49
VPS33A-201ENST00000267199 DNALI1O14645 258 aaPredicted RBP11.98□□□□□ -0.49
VPS33A-201ENST00000267199 PSMC3P17980 439 aa11.98□□□□□ -0.49
VPS33A-201ENST00000267199 TFE3P19532 575 aaPredicted RBP11.98□□□□□ -0.49
VPS33A-201ENST00000267199 INPP1P49441 399 aa11.98□□□□□ -0.49
VPS33A-201ENST00000267199 EFCAB12Q6NXP0 572 aa11.98□□□□□ -0.49
VPS33A-201ENST00000267199 CERKQ8TCT0 537 aa11.98□□□□□ -0.49
VPS33A-201ENST00000267199 ZNF669Q96BR6 464 aaPredicted RBP11.98□□□□□ -0.49
VPS33A-201ENST00000267199 FAM193BQ96PV7 902 aaPredicted RBP11.98□□□□□ -0.49
VPS33A-201ENST00000267199 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.98□□□□□ -0.49
VPS33A-201ENST00000267199 PKD2L2Q9NZM6 624 aa11.98□□□□□ -0.49
VPS33A-201ENST00000267199 FAM237BA0A1B0GVD1 139 aa11.98□□□□□ -0.49
VPS33A-201ENST00000267199 ADRB2P07550 413 aa11.98□□□□□ -0.49
VPS33A-201ENST00000267199 CREB1P16220 341 aa11.98□□□□□ -0.49
VPS33A-201ENST00000267199 MCL1Q07820 350 aa11.98□□□□□ -0.49
VPS33A-201ENST00000267199 SIK2Q9H0K1 926 aa11.98□□□□□ -0.49
VPS33A-201ENST00000267199 SAE1Q9UBE0 346 aaPredicted RBP11.98□□□□□ -0.49
VPS33A-201ENST00000267199 ATXN2Q99700 1313 aaKnown RBP11.97□□□□□ -0.49
VPS33A-201ENST00000267199 ROBO3Q96MS0 1386 aa11.97□□□□□ -0.49
VPS33A-201ENST00000267199 BANF1O75531 89 aa11.97□□□□□ -0.49
VPS33A-201ENST00000267199 SMNDC1O75940 238 aaKnown RBP eCLIP11.97□□□□□ -0.49
VPS33A-201ENST00000267199 TBL3Q12788 808 aaKnown RBP11.97□□□□□ -0.49
VPS33A-201ENST00000267199 BMT2Q1RMZ1 405 aa11.97□□□□□ -0.49
VPS33A-201ENST00000267199 LACTB2Q53H82 288 aaPredicted RBP11.97□□□□□ -0.49
VPS33A-201ENST00000267199 SLC45A4Q5BKX6 768 aa11.97□□□□□ -0.49
VPS33A-201ENST00000267199 SLC26A11Q86WA9 606 aa11.97□□□□□ -0.49
VPS33A-201ENST00000267199 GIPC2Q8TF65 315 aa11.97□□□□□ -0.49
VPS33A-201ENST00000267199 HPDLQ96IR7 371 aa11.97□□□□□ -0.49
VPS33A-201ENST00000267199 ZBTB45Q96K62 511 aaPredicted RBP11.97□□□□□ -0.49
VPS33A-201ENST00000267199 PRPF18Q99633 342 aaKnown RBP11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms