RNA–Protein interactions for RNA: ENST00000262213.6

TRAM1-201, Transcript of translocation associated membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAM1, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-201ENST00000262213 KCNA2P16389 499 aa18.22■□□□□ 0.51
TRAM1-201ENST00000262213 RAP1GAPP47736 663 aa18.22■□□□□ 0.51
TRAM1-201ENST00000262213 PSMC1P62191 440 aaKnown RBP18.22■□□□□ 0.51
TRAM1-201ENST00000262213 OCRLQ01968 901 aa18.22■□□□□ 0.51
TRAM1-201ENST00000262213 SLC25A11Q02978 314 aaKnown RBP18.22■□□□□ 0.51
TRAM1-201ENST00000262213 AP1B1Q10567 949 aa18.22■□□□□ 0.51
TRAM1-201ENST00000262213 SPDYE2Q495Y8 402 aa18.22■□□□□ 0.51
TRAM1-201ENST00000262213 PTPN20Q4JDL3 420 aa18.22■□□□□ 0.51
TRAM1-201ENST00000262213 FOXB2Q5VYV0 432 aa18.22■□□□□ 0.51
TRAM1-201ENST00000262213 BBS12Q6ZW61 710 aa18.22■□□□□ 0.51
TRAM1-201ENST00000262213 TMEM130Q8N3G9 435 aa18.22■□□□□ 0.51
TRAM1-201ENST00000262213 ATG4CQ96DT6 458 aa18.22■□□□□ 0.51
TRAM1-201ENST00000262213 STRIP2Q9ULQ0 834 aa18.22■□□□□ 0.51
TRAM1-201ENST00000262213 WDR81Q562E7 1941 aa18.22■□□□□ 0.51
TRAM1-201ENST00000262213 I3L4J1 428 aa18.22■□□□□ 0.51
TRAM1-201ENST00000262213 PIK3R2O00459 728 aa18.22■□□□□ 0.51
TRAM1-201ENST00000262213 WDR46O15213 610 aaKnown RBP18.22■□□□□ 0.51
TRAM1-201ENST00000262213 ZNF132P52740 706 aa18.22■□□□□ 0.51
TRAM1-201ENST00000262213 RBBP5Q15291 538 aaKnown RBP18.22■□□□□ 0.51
TRAM1-201ENST00000262213 DPH6Q7L8W6 267 aa18.22■□□□□ 0.51
TRAM1-201ENST00000262213 VSIG10LQ86VR7 867 aa18.22■□□□□ 0.51
TRAM1-201ENST00000262213 RBM15BQ8NDT2 890 aaKnown RBP18.22■□□□□ 0.51
TRAM1-201ENST00000262213 CCDC110Q8TBZ0 833 aa18.22■□□□□ 0.51
TRAM1-201ENST00000262213 ZNF526Q8TF50 670 aaPredicted RBP18.22■□□□□ 0.51
TRAM1-201ENST00000262213 CNTN6Q9UQ52 1028 aa18.22■□□□□ 0.51
TRAM1-201ENST00000262213 ASB3Q9Y575 518 aa18.22■□□□□ 0.51
TRAM1-201ENST00000262213 E7ESA3 106 aa18.21■□□□□ 0.51
TRAM1-201ENST00000262213 ABLIM1O14639 778 aa18.21■□□□□ 0.51
TRAM1-201ENST00000262213 MCF2LO15068 1137 aa18.21■□□□□ 0.51
TRAM1-201ENST00000262213 DNAJC6O75061 913 aa18.21■□□□□ 0.51
TRAM1-201ENST00000262213 RGS20O76081 388 aa18.21■□□□□ 0.51
TRAM1-201ENST00000262213 OSTNP61366 133 aa18.21■□□□□ 0.51
TRAM1-201ENST00000262213 TFAMQ00059 246 aaKnown RBP18.21■□□□□ 0.51
TRAM1-201ENST00000262213 MTMR2Q13614 643 aa18.21■□□□□ 0.51
TRAM1-201ENST00000262213 HADHQ16836 314 aaKnown RBP18.21■□□□□ 0.51
TRAM1-201ENST00000262213 RSBN1LQ6PCB5 846 aaPredicted RBP18.21■□□□□ 0.51
TRAM1-201ENST00000262213 C1orf228Q6PIY5 440 aa18.21■□□□□ 0.51
TRAM1-201ENST00000262213 RILPQ96NA2 401 aa18.21■□□□□ 0.51
TRAM1-201ENST00000262213 KIAA1217Q5T5P2 1943 aa18.21■□□□□ 0.51
TRAM1-201ENST00000262213 MEI4A8MW99 385 aa18.21■□□□□ 0.51
TRAM1-201ENST00000262213 CXorf49A8MYA2 514 aaPredicted RBP18.21■□□□□ 0.51
TRAM1-201ENST00000262213 NDC80O14777 642 aa18.21■□□□□ 0.51
TRAM1-201ENST00000262213 UGT1A9O60656 530 aa18.21■□□□□ 0.51
TRAM1-201ENST00000262213 DHRS4L1P0CG22 281 aa18.21■□□□□ 0.51
TRAM1-201ENST00000262213 PTPN7P35236 360 aa18.21■□□□□ 0.51
TRAM1-201ENST00000262213 BST1Q10588 318 aa18.21■□□□□ 0.51
TRAM1-201ENST00000262213 CWF19L1Q69YN2 538 aaKnown RBP18.21■□□□□ 0.51
TRAM1-201ENST00000262213 SMC1BQ8NDV3 1235 aa18.21■□□□□ 0.51
TRAM1-201ENST00000262213 SHKBP1Q8TBC3 707 aa18.21■□□□□ 0.51
TRAM1-201ENST00000262213 SLC44A1Q8WWI5 657 aa18.21■□□□□ 0.51
TRAM1-201ENST00000262213 FAF2Q96CS3 445 aa18.21■□□□□ 0.51
TRAM1-201ENST00000262213 ZNF668Q96K58 619 aaPredicted RBP18.21■□□□□ 0.51
TRAM1-201ENST00000262213 ZNF184Q99676 751 aaPredicted RBP18.21■□□□□ 0.51
TRAM1-201ENST00000262213 TRIM56Q9BRZ2 755 aaKnown RBP18.21■□□□□ 0.51
TRAM1-201ENST00000262213 RPAP3Q9H6T3 665 aaPredicted RBP18.21■□□□□ 0.51
TRAM1-201ENST00000262213 UGT1A7Q9HAW7 530 aa18.21■□□□□ 0.51
TRAM1-201ENST00000262213 UGT1A10Q9HAW8 530 aa18.21■□□□□ 0.51
TRAM1-201ENST00000262213 UGT1A8Q9HAW9 530 aa18.21■□□□□ 0.51
TRAM1-201ENST00000262213 CYTH4Q9UIA0 394 aa18.21■□□□□ 0.51
TRAM1-201ENST00000262213 A0A0B4J269 797 aa18.2■□□□□ 0.5
TRAM1-201ENST00000262213 H0YCG3 227 aa18.2■□□□□ 0.5
TRAM1-201ENST00000262213 H7C0C1 242 aa18.2■□□□□ 0.5
TRAM1-201ENST00000262213 SMAPO00193 183 aa18.2■□□□□ 0.5
TRAM1-201ENST00000262213 PLSCR1O15162 318 aa18.2■□□□□ 0.5
TRAM1-201ENST00000262213 ASS1P00966 412 aaKnown RBP18.2■□□□□ 0.5
TRAM1-201ENST00000262213 ATP5OP48047 213 aa18.2■□□□□ 0.5
TRAM1-201ENST00000262213 TRPC3Q13507 836 aa18.2■□□□□ 0.5
TRAM1-201ENST00000262213 CHI3L2Q15782 390 aa18.2■□□□□ 0.5
TRAM1-201ENST00000262213 IZUMO2Q6UXV1 221 aa18.2■□□□□ 0.5
TRAM1-201ENST00000262213 RIPOR1Q6ZS17 1223 aa18.2■□□□□ 0.5
TRAM1-201ENST00000262213 ZCCHC23Q6ZST2 131 aa18.2■□□□□ 0.5
TRAM1-201ENST00000262213 CHSY1Q86X52 802 aa18.2■□□□□ 0.5
TRAM1-201ENST00000262213 TTC13Q8NBP0 860 aa18.2■□□□□ 0.5
TRAM1-201ENST00000262213 FGD4Q96M96 766 aa18.2■□□□□ 0.5
TRAM1-201ENST00000262213 TRIM4Q9C037 500 aa18.2■□□□□ 0.5
TRAM1-201ENST00000262213 FETUBQ9UGM5 382 aa18.2■□□□□ 0.5
TRAM1-201ENST00000262213 COL2A1P02458 1487 aaPredicted RBP18.2■□□□□ 0.5
TRAM1-201ENST00000262213 LGR5O75473 907 aa18.2■□□□□ 0.5
TRAM1-201ENST00000262213 KRT7P08729 469 aa18.2■□□□□ 0.5
TRAM1-201ENST00000262213 AQP5P55064 265 aa18.2■□□□□ 0.5
TRAM1-201ENST00000262213 TGFB2P61812 414 aa18.2■□□□□ 0.5
TRAM1-201ENST00000262213 KRT72Q14CN4 511 aa18.2■□□□□ 0.5
TRAM1-201ENST00000262213 LRRC36Q1X8D7 754 aa18.2■□□□□ 0.5
TRAM1-201ENST00000262213 CES4AQ5XG92 561 aa18.2■□□□□ 0.5
TRAM1-201ENST00000262213 SLFN12LQ6IEE8 588 aa18.2■□□□□ 0.5
TRAM1-201ENST00000262213 PPP1R2P3Q6NXS1 205 aa18.2■□□□□ 0.5
TRAM1-201ENST00000262213 ARHGAP24Q8N264 748 aa18.2■□□□□ 0.5
TRAM1-201ENST00000262213 CPSF2Q9P2I0 782 aaKnown RBP18.2■□□□□ 0.5
TRAM1-201ENST00000262213 POLIQ9UNA4 740 aa18.2■□□□□ 0.5
TRAM1-201ENST00000262213 LSM8O95777 96 aaKnown RBP18.19■□□□□ 0.5
TRAM1-201ENST00000262213 TOP3BO95985 862 aaKnown RBP18.19■□□□□ 0.5
TRAM1-201ENST00000262213 RAB6CQ53S08 254 aa18.19■□□□□ 0.5
TRAM1-201ENST00000262213 SCUBE1Q8IWY4 988 aa18.19■□□□□ 0.5
TRAM1-201ENST00000262213 RDM1Q8NG50 284 aa18.19■□□□□ 0.5
TRAM1-201ENST00000262213 RAB6CQ9H0N0 254 aa18.19■□□□□ 0.5
TRAM1-201ENST00000262213 RAB6BQ9NRW1 208 aa18.19■□□□□ 0.5
TRAM1-201ENST00000262213 STYXL1Q9Y6J8 313 aa18.19■□□□□ 0.5
TRAM1-201ENST00000262213 DCAF8L1A6NGE4 600 aa18.19■□□□□ 0.5
TRAM1-201ENST00000262213 DKC1O60832 514 aaKnown RBP eCLIP18.19■□□□□ 0.5
TRAM1-201ENST00000262213 CIB2O75838 187 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms