RNA–Protein interactions for RNA: ENST00000261963.11

MCF2L-201, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 2,419 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-201ENST00000261963 YARSP54577 528 aaKnown RBP23.64■■□□□ 1.37
MCF2L-201ENST00000261963 SMTNL2Q2TAL5 461 aa23.64■■□□□ 1.37
MCF2L-201ENST00000261963 ZNF667Q5HYK9 610 aa23.64■■□□□ 1.37
MCF2L-201ENST00000261963 IRGCQ6NXR0 463 aa23.64■■□□□ 1.37
MCF2L-201ENST00000261963 PPP1R21Q6ZMI0 780 aa23.64■■□□□ 1.37
MCF2L-201ENST00000261963 CEP128Q6ZU80 1094 aa23.64■■□□□ 1.37
MCF2L-201ENST00000261963 SRRM1Q8IYB3 904 aaKnown RBP23.64■■□□□ 1.37
MCF2L-201ENST00000261963 TBC1D10AQ9BXI6 508 aa23.64■■□□□ 1.37
MCF2L-201ENST00000261963 IFT122Q9HBG6 1241 aa23.64■■□□□ 1.37
MCF2L-201ENST00000261963 SAE1Q9UBE0 346 aaPredicted RBP23.64■■□□□ 1.37
MCF2L-201ENST00000261963 DYNC1LI1Q9Y6G9 523 aaKnown RBP23.64■■□□□ 1.37
MCF2L-201ENST00000261963 CSDE1O75534 798 aaKnown RBP23.63■■□□□ 1.37
MCF2L-201ENST00000261963 LMNAP02545 664 aaKnown RBP23.63■■□□□ 1.37
MCF2L-201ENST00000261963 POLR2BP30876 1174 aaKnown RBP23.63■■□□□ 1.37
MCF2L-201ENST00000261963 PSMC1P62191 440 aaKnown RBP23.63■■□□□ 1.37
MCF2L-201ENST00000261963 MORF4L2Q15014 288 aa23.63■■□□□ 1.37
MCF2L-201ENST00000261963 FAM47EQ6ZV65 393 aa23.63■■□□□ 1.37
MCF2L-201ENST00000261963 SLC4A11Q8NBS3 891 aa23.63■■□□□ 1.37
MCF2L-201ENST00000261963 ZWILCHQ9H900 591 aa23.63■■□□□ 1.37
MCF2L-201ENST00000261963 SDAD1Q9NVU7 687 aaKnown RBP eCLIP23.63■■□□□ 1.37
MCF2L-201ENST00000261963 KCNH4Q9UQ05 1017 aa23.63■■□□□ 1.37
MCF2L-201ENST00000261963 USH1CQ9Y6N9 552 aa23.63■■□□□ 1.37
MCF2L-201ENST00000261963 LACTBL1A8MY62 500 aa23.63■■□□□ 1.37
MCF2L-201ENST00000261963 ERBB2P04626 1255 aa23.63■■□□□ 1.37
MCF2L-201ENST00000261963 RASSF2P50749 326 aa23.63■■□□□ 1.37
MCF2L-201ENST00000261963 IL9RQ01113 521 aa23.63■■□□□ 1.37
MCF2L-201ENST00000261963 KCNT1Q5JUK3 1230 aa23.63■■□□□ 1.37
MCF2L-201ENST00000261963 RNF220Q5VTB9 566 aa23.63■■□□□ 1.37
MCF2L-201ENST00000261963 XYLT1Q86Y38 959 aa23.63■■□□□ 1.37
MCF2L-201ENST00000261963 FNIP1Q8TF40 1166 aa23.63■■□□□ 1.37
MCF2L-201ENST00000261963 CFAP57Q96MR6 1250 aa23.63■■□□□ 1.37
MCF2L-201ENST00000261963 PCDH9Q9HC56 1237 aa23.63■■□□□ 1.37
MCF2L-201ENST00000261963 CHKBQ9Y259 395 aa23.63■■□□□ 1.37
MCF2L-201ENST00000261963 FOXN2P32314 431 aa23.62■■□□□ 1.37
MCF2L-201ENST00000261963 AMHR2Q16671 573 aa23.62■■□□□ 1.37
MCF2L-201ENST00000261963 HP1BP3Q5SSJ5 553 aaPredicted RBP23.62■■□□□ 1.37
MCF2L-201ENST00000261963 EMC1Q8N766 993 aa23.62■■□□□ 1.37
MCF2L-201ENST00000261963 TTC8Q8TAM2 541 aa23.62■■□□□ 1.37
MCF2L-201ENST00000261963 ELOVL4Q9GZR5 314 aa23.62■■□□□ 1.37
MCF2L-201ENST00000261963 STARD13Q9Y3M8 1113 aa23.62■■□□□ 1.37
MCF2L-201ENST00000261963 ACTL7BQ9Y614 415 aa23.62■■□□□ 1.37
MCF2L-201ENST00000261963 MED7O43513 233 aa23.62■■□□□ 1.37
MCF2L-201ENST00000261963 STAG3L1P0CL83 205 aa23.62■■□□□ 1.37
MCF2L-201ENST00000261963 DYNLT1P63172 113 aa23.62■■□□□ 1.37
MCF2L-201ENST00000261963 TAZQ16635 292 aa23.62■■□□□ 1.37
MCF2L-201ENST00000261963 JADE1Q6IE81 842 aa23.62■■□□□ 1.37
MCF2L-201ENST00000261963 FAM136AQ96C01 138 aa23.62■■□□□ 1.37
MCF2L-201ENST00000261963 FAM210AQ96ND0 272 aa23.62■■□□□ 1.37
MCF2L-201ENST00000261963 GORASP1Q9BQQ3 440 aa23.62■■□□□ 1.37
MCF2L-201ENST00000261963 NFKBIZQ9BYH8 718 aa23.62■■□□□ 1.37
MCF2L-201ENST00000261963 DCLRE1BQ9H816 532 aa23.62■■□□□ 1.37
MCF2L-201ENST00000261963 RPL26L1Q9UNX3 145 aaKnown RBP23.62■■□□□ 1.37
MCF2L-201ENST00000261963 SGK1O00141 431 aa23.61■■□□□ 1.37
MCF2L-201ENST00000261963 NVLO15381 856 aaKnown RBP23.61■■□□□ 1.37
MCF2L-201ENST00000261963 DCTN3O75935 186 aa23.61■■□□□ 1.37
MCF2L-201ENST00000261963 RNF8O76064 485 aa23.61■■□□□ 1.37
MCF2L-201ENST00000261963 IFNB1P01574 187 aa23.61■■□□□ 1.37
MCF2L-201ENST00000261963 ITGB3P05106 788 aa23.61■■□□□ 1.37
MCF2L-201ENST00000261963 EPHB2P29323 1055 aa23.61■■□□□ 1.37
MCF2L-201ENST00000261963 PLCB3Q01970 1234 aa23.61■■□□□ 1.37
MCF2L-201ENST00000261963 ADCY1Q08828 1119 aa23.61■■□□□ 1.37
MCF2L-201ENST00000261963 TMED2Q15363 201 aa23.61■■□□□ 1.37
MCF2L-201ENST00000261963 OR52E8Q6IFG1 317 aa23.61■■□□□ 1.37
MCF2L-201ENST00000261963 RIBC1Q8N443 379 aaPredicted RBP23.61■■□□□ 1.37
MCF2L-201ENST00000261963 ACTL9Q8TC94 416 aa23.61■■□□□ 1.37
MCF2L-201ENST00000261963 SLC7A6OSQ96CW6 309 aaPredicted RBP23.61■■□□□ 1.37
MCF2L-201ENST00000261963 C10orf88Q9H8K7 445 aa23.61■■□□□ 1.37
MCF2L-201ENST00000261963 SCOCQ9UIL1 159 aa23.61■■□□□ 1.37
MCF2L-201ENST00000261963 EFR3BQ9Y2G0 817 aa23.61■■□□□ 1.37
MCF2L-201ENST00000261963 IGBP1P78318 339 aa23.61■■□□□ 1.37
MCF2L-201ENST00000261963 OTUD4Q01804 1114 aaKnown RBP23.61■■□□□ 1.37
MCF2L-201ENST00000261963 PTPN11Q06124 597 aaPredicted RBP23.61■■□□□ 1.37
MCF2L-201ENST00000261963 ZNF333Q96JL9 665 aa23.61■■□□□ 1.37
MCF2L-201ENST00000261963 TTC25Q96NG3 672 aa23.61■■□□□ 1.37
MCF2L-201ENST00000261963 TRAPPC9Q96Q05 1148 aa23.61■■□□□ 1.37
MCF2L-201ENST00000261963 METTL5Q9NRN9 209 aaKnown RBP23.61■■□□□ 1.37
MCF2L-201ENST00000261963 PRMT7Q9NVM4 692 aaPredicted RBP23.61■■□□□ 1.37
MCF2L-201ENST00000261963 STOML1Q9UBI4 398 aa23.61■■□□□ 1.37
MCF2L-201ENST00000261963 SHOC2Q9UQ13 582 aa23.61■■□□□ 1.37
MCF2L-201ENST00000261963 DICER1Q9UPY3 1922 aaKnown RBP23.61■■□□□ 1.37
MCF2L-201ENST00000261963 EXOC1LA0A1B0GW35 172 aa23.6■■□□□ 1.37
MCF2L-201ENST00000261963 ALOX15BO15296 676 aa23.6■■□□□ 1.37
MCF2L-201ENST00000261963 CILPO75339 1184 aa23.6■■□□□ 1.37
MCF2L-201ENST00000261963 CD48P09326 243 aa23.6■■□□□ 1.37
MCF2L-201ENST00000261963 GDF10P55107 478 aa23.6■■□□□ 1.37
MCF2L-201ENST00000261963 POLE2P56282 527 aa23.6■■□□□ 1.37
MCF2L-201ENST00000261963 WDR78Q5VTH9 848 aa23.6■■□□□ 1.37
MCF2L-201ENST00000261963 BBS12Q6ZW61 710 aa23.6■■□□□ 1.37
MCF2L-201ENST00000261963 ANKRD13AQ8IZ07 590 aa23.6■■□□□ 1.37
MCF2L-201ENST00000261963 EZH1Q92800 747 aaPredicted RBP23.6■■□□□ 1.37
MCF2L-201ENST00000261963 DENND2DQ9H6A0 471 aaPredicted RBP23.6■■□□□ 1.37
MCF2L-201ENST00000261963 FARP1Q9Y4F1 1045 aaPredicted RBP23.6■■□□□ 1.37
MCF2L-201ENST00000261963 RASA4BC9J798 803 aa23.6■■□□□ 1.37
MCF2L-201ENST00000261963 RASA4O43374 803 aa23.6■■□□□ 1.37
MCF2L-201ENST00000261963 CST8O60676 142 aa23.6■■□□□ 1.37
MCF2L-201ENST00000261963 ENTPD5O75356 428 aa23.6■■□□□ 1.37
MCF2L-201ENST00000261963 KRT7P08729 469 aa23.6■■□□□ 1.37
MCF2L-201ENST00000261963 KDELR1P24390 212 aa23.6■■□□□ 1.37
MCF2L-201ENST00000261963 GJC2Q5T442 439 aaPredicted RBP23.6■■□□□ 1.37
MCF2L-201ENST00000261963 TDRPQ86YL5 185 aa23.6■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms