RNA–Protein interactions for RNA: ENST00000261517.9

VPS13C-202, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 13,400 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-202ENST00000261517 COILP38432 576 aaPredicted RBP4.47□□□□□ -1.69
VPS13C-202ENST00000261517 POU5F1BQ06416 359 aa4.47□□□□□ -1.69
VPS13C-202ENST00000261517 XRCC4Q13426 336 aa4.47□□□□□ -1.69
VPS13C-202ENST00000261517 C1orf146Q5VVC0 180 aa4.47□□□□□ -1.69
VPS13C-202ENST00000261517 ZBED8Q8IZ13 594 aa4.47□□□□□ -1.69
VPS13C-202ENST00000261517 MAGEB18Q96M61 343 aa4.47□□□□□ -1.69
VPS13C-202ENST00000261517 HEY1Q9Y5J3 304 aa4.47□□□□□ -1.69
VPS13C-202ENST00000261517 AHDC1Q5TGY3 1603 aaPredicted RBP4.47□□□□□ -1.69
VPS13C-202ENST00000261517 TJP1Q07157 1748 aa4.47□□□□□ -1.69
VPS13C-202ENST00000261517 PTGER2P43116 358 aa4.47□□□□□ -1.69
VPS13C-202ENST00000261517 PTF1AQ7RTS3 328 aa4.47□□□□□ -1.69
VPS13C-202ENST00000261517 SPATA21Q7Z572 469 aa4.47□□□□□ -1.69
VPS13C-202ENST00000261517 GLYCTKQ8IVS8 523 aa4.47□□□□□ -1.69
VPS13C-202ENST00000261517 RDH11Q8TC12 318 aa4.47□□□□□ -1.69
VPS13C-202ENST00000261517 ATL1Q8WXF7 558 aa4.47□□□□□ -1.69
VPS13C-202ENST00000261517 RIT1Q92963 219 aa4.47□□□□□ -1.69
VPS13C-202ENST00000261517 EGFL8Q99944 293 aa4.47□□□□□ -1.69
VPS13C-202ENST00000261517 EIF3LQ9Y262 564 aaKnown RBP4.47□□□□□ -1.69
VPS13C-202ENST00000261517 NAV1Q8NEY1 1877 aa4.47□□□□□ -1.69
VPS13C-202ENST00000261517 ADGRA2Q96PE1 1338 aa4.47□□□□□ -1.69
VPS13C-202ENST00000261517 DNAJC6O75061 913 aa4.47□□□□□ -1.69
VPS13C-202ENST00000261517 ANP32DO95626 131 aa4.47□□□□□ -1.69
VPS13C-202ENST00000261517 ITGALP20701 1170 aa4.47□□□□□ -1.69
VPS13C-202ENST00000261517 CYP3A5P20815 502 aa4.47□□□□□ -1.69
VPS13C-202ENST00000261517 PON1P27169 355 aa4.47□□□□□ -1.69
VPS13C-202ENST00000261517 CCR1P32246 355 aa4.47□□□□□ -1.69
VPS13C-202ENST00000261517 DYNLT1P63172 113 aa4.47□□□□□ -1.69
VPS13C-202ENST00000261517 LRRC74AQ0VAA2 488 aa4.47□□□□□ -1.69
VPS13C-202ENST00000261517 CYLC2Q14093 348 aaPredicted RBP4.47□□□□□ -1.69
VPS13C-202ENST00000261517 TERF2Q15554 542 aa4.47□□□□□ -1.69
VPS13C-202ENST00000261517 GRTP1Q5TC63 336 aa4.47□□□□□ -1.69
VPS13C-202ENST00000261517 ICE2Q659A1 982 aa4.47□□□□□ -1.69
VPS13C-202ENST00000261517 SLC13A5Q86YT5 568 aaPredicted RBP4.47□□□□□ -1.69
VPS13C-202ENST00000261517 NAF1Q96HR8 494 aaKnown RBP4.47□□□□□ -1.69
VPS13C-202ENST00000261517 TSEN34Q9BSV6 310 aaKnown RBP4.47□□□□□ -1.69
VPS13C-202ENST00000261517 RRAGDQ9NQL2 400 aaPredicted RBP4.47□□□□□ -1.69
VPS13C-202ENST00000261517 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP4.47□□□□□ -1.69
VPS13C-202ENST00000261517 ADAM21Q9UKJ8 722 aa4.47□□□□□ -1.69
VPS13C-202ENST00000261517 PTCH2Q9Y6C5 1203 aa4.47□□□□□ -1.69
VPS13C-202ENST00000261517 MYO9BQ13459 2157 aa4.47□□□□□ -1.69
VPS13C-202ENST00000261517 PKD1L3Q7Z443 1732 aa4.47□□□□□ -1.69
VPS13C-202ENST00000261517 C5orf58C9J3I9 102 aa4.47□□□□□ -1.69
VPS13C-202ENST00000261517 ACADSP16219 412 aa4.47□□□□□ -1.69
VPS13C-202ENST00000261517 NCF2P19878 526 aaPredicted RBP4.47□□□□□ -1.69
VPS13C-202ENST00000261517 OGNP20774 298 aaKnown RBP4.47□□□□□ -1.69
VPS13C-202ENST00000261517 PTPN3P26045 913 aa4.47□□□□□ -1.69
VPS13C-202ENST00000261517 MAGOHP61326 146 aaKnown RBP4.47□□□□□ -1.69
VPS13C-202ENST00000261517 WLSQ5T9L3 541 aa4.47□□□□□ -1.69
VPS13C-202ENST00000261517 RETSATQ6NUM9 610 aa4.47□□□□□ -1.69
VPS13C-202ENST00000261517 CCNI2Q6ZMN8 369 aaPredicted RBP4.47□□□□□ -1.69
VPS13C-202ENST00000261517 SLFN11Q7Z7L1 901 aa4.47□□□□□ -1.69
VPS13C-202ENST00000261517 CCDC24Q8N4L8 307 aa4.47□□□□□ -1.69
VPS13C-202ENST00000261517 LRRC52Q8N7C0 313 aa4.47□□□□□ -1.69
VPS13C-202ENST00000261517 CENPTQ96BT3 561 aa4.47□□□□□ -1.69
VPS13C-202ENST00000261517 PPP1R16AQ96I34 528 aa4.47□□□□□ -1.69
VPS13C-202ENST00000261517 CPNE1Q99829 537 aa4.47□□□□□ -1.69
VPS13C-202ENST00000261517 NRXN3Q9Y4C0 1643 aa4.47□□□□□ -1.69
VPS13C-202ENST00000261517 MYH15Q9Y2K3 1946 aa4.47□□□□□ -1.69
VPS13C-202ENST00000261517 ENC1O14682 589 aa4.47□□□□□ -1.69
VPS13C-202ENST00000261517 ZNF263O14978 683 aa4.47□□□□□ -1.69
VPS13C-202ENST00000261517 ADCY3O60266 1144 aa4.47□□□□□ -1.69
VPS13C-202ENST00000261517 ZNF862O60290 1169 aa4.47□□□□□ -1.69
VPS13C-202ENST00000261517 CD2BP2O95400 341 aaKnown RBP4.47□□□□□ -1.69
VPS13C-202ENST00000261517 TCF7P36402 384 aaPredicted RBP4.47□□□□□ -1.69
VPS13C-202ENST00000261517 PTPN11Q06124 597 aaPredicted RBP4.47□□□□□ -1.69
VPS13C-202ENST00000261517 CNTN1Q12860 1018 aa4.47□□□□□ -1.69
VPS13C-202ENST00000261517 NYAP1Q6ZVC0 841 aa4.47□□□□□ -1.69
VPS13C-202ENST00000261517 TRIML2Q8N7C3 387 aa4.47□□□□□ -1.69
VPS13C-202ENST00000261517 AVL9Q8NBF6 648 aa4.47□□□□□ -1.69
VPS13C-202ENST00000261517 ZNF512Q96ME7 567 aaPredicted RBP4.47□□□□□ -1.69
VPS13C-202ENST00000261517 PANX3Q96QZ0 392 aa4.47□□□□□ -1.69
VPS13C-202ENST00000261517 MUC13Q9H3R2 512 aa4.47□□□□□ -1.69
VPS13C-202ENST00000261517 DMAP1Q9NPF5 467 aaPredicted RBP4.47□□□□□ -1.69
VPS13C-202ENST00000261517 SMYD2Q9NRG4 433 aa4.47□□□□□ -1.69
VPS13C-202ENST00000261517 POLRMTO00411 1230 aaKnown RBP4.47□□□□□ -1.69
VPS13C-202ENST00000261517 EEF1DP29692 281 aaKnown RBP4.47□□□□□ -1.69
VPS13C-202ENST00000261517 SARSP49591 514 aaKnown RBP4.47□□□□□ -1.69
VPS13C-202ENST00000261517 LARP7Q4G0J3 582 aaKnown RBP eCLIP4.47□□□□□ -1.69
VPS13C-202ENST00000261517 ARMC6Q6NXE6 501 aa4.47□□□□□ -1.69
VPS13C-202ENST00000261517 RRM2BQ7LG56 351 aa4.47□□□□□ -1.69
VPS13C-202ENST00000261517 JAMLQ86YT9 394 aa4.47□□□□□ -1.69
VPS13C-202ENST00000261517 GRAMD1CQ8IYS0 662 aa4.47□□□□□ -1.69
VPS13C-202ENST00000261517 SLC26A7Q8TE54 656 aa4.47□□□□□ -1.69
VPS13C-202ENST00000261517 CYP26A1O43174 497 aa4.47□□□□□ -1.69
VPS13C-202ENST00000261517 ZBTB48P10074 688 aaPredicted RBP4.47□□□□□ -1.69
VPS13C-202ENST00000261517 PLA2G4AP47712 749 aa4.47□□□□□ -1.69
VPS13C-202ENST00000261517 PTENP60484 403 aa4.47□□□□□ -1.69
VPS13C-202ENST00000261517 HPCAP84074 193 aa4.47□□□□□ -1.69
VPS13C-202ENST00000261517 KATNAL2Q8IYT4 538 aa4.47□□□□□ -1.69
VPS13C-202ENST00000261517 POLE3Q9NRF9 147 aa4.47□□□□□ -1.69
VPS13C-202ENST00000261517 LNPEPQ9UIQ6 1025 aa4.47□□□□□ -1.69
VPS13C-202ENST00000261517 MAFFQ9ULX9 164 aa4.47□□□□□ -1.69
VPS13C-202ENST00000261517 TRPV2Q9Y5S1 764 aa4.47□□□□□ -1.69
VPS13C-202ENST00000261517 NCANO14594 1321 aa4.47□□□□□ -1.69
VPS13C-202ENST00000261517 PDE4DIPQ5VU43 2346 aa4.47□□□□□ -1.69
VPS13C-202ENST00000261517 A0A087X1B8 175 aa4.47□□□□□ -1.69
VPS13C-202ENST00000261517 TTC36A6NLP5 189 aa4.47□□□□□ -1.69
VPS13C-202ENST00000261517 VWA5AO00534 786 aa4.47□□□□□ -1.69
VPS13C-202ENST00000261517 PROSCO94903 275 aa4.47□□□□□ -1.69
VPS13C-202ENST00000261517 APOA1P02647 267 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms