RNA–Protein interactions for RNA: ENST00000261037.7

COL8A1-201, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL8A1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-201ENST00000261037 WEE1P30291 646 aa12.53□□□□□ -0.4
COL8A1-201ENST00000261037 FDFT1P37268 417 aa12.53□□□□□ -0.4
COL8A1-201ENST00000261037 SREBF2Q12772 1141 aa12.53□□□□□ -0.4
COL8A1-201ENST00000261037 FAM83EQ2M2I3 478 aa12.53□□□□□ -0.4
COL8A1-201ENST00000261037 LRRC8BQ6P9F7 803 aa12.53□□□□□ -0.4
COL8A1-201ENST00000261037 DNAJC7Q99615 494 aa12.53□□□□□ -0.4
COL8A1-201ENST00000261037 COLEC11Q9BWP8 271 aa12.53□□□□□ -0.4
COL8A1-201ENST00000261037 CCDC134Q9H6E4 229 aa12.53□□□□□ -0.4
COL8A1-201ENST00000261037 CASTOR2A6NHX0 329 aa12.53□□□□□ -0.4
COL8A1-201ENST00000261037 PCNAP12004 261 aa12.53□□□□□ -0.4
COL8A1-201ENST00000261037 ERAP2Q6P179 960 aa12.53□□□□□ -0.4
COL8A1-201ENST00000261037 TRIM65Q6PJ69 517 aa12.53□□□□□ -0.4
COL8A1-201ENST00000261037 MPZL3Q6UWV2 235 aa12.53□□□□□ -0.4
COL8A1-201ENST00000261037 CCT7Q99832 543 aa12.53□□□□□ -0.4
COL8A1-201ENST00000261037 CHST12Q9NRB3 414 aa12.53□□□□□ -0.4
COL8A1-201ENST00000261037 MAFGO15525 162 aa12.53□□□□□ -0.4
COL8A1-201ENST00000261037 DEAF1O75398 565 aaPredicted RBP12.53□□□□□ -0.4
COL8A1-201ENST00000261037 B3GAT3O94766 335 aa12.53□□□□□ -0.4
COL8A1-201ENST00000261037 KRT16P08779 473 aa12.53□□□□□ -0.4
COL8A1-201ENST00000261037 DAB2IPQ5VWQ8 1189 aa12.53□□□□□ -0.4
COL8A1-201ENST00000261037 SLC47A2Q86VL8 602 aa12.53□□□□□ -0.4
COL8A1-201ENST00000261037 PHTF1Q9UMS5 762 aa12.53□□□□□ -0.4
COL8A1-201ENST00000261037 H2AFYO75367 372 aaKnown RBP12.52□□□□□ -0.4
COL8A1-201ENST00000261037 ANGPT1Q15389 498 aa12.52□□□□□ -0.4
COL8A1-201ENST00000261037 PTGISQ16647 500 aa12.52□□□□□ -0.4
COL8A1-201ENST00000261037 C11orf63Q6NUN7 778 aa12.52□□□□□ -0.4
COL8A1-201ENST00000261037 CHMP1BQ7LBR1 199 aa12.52□□□□□ -0.4
COL8A1-201ENST00000261037 SLC20A1Q8WUM9 679 aa12.52□□□□□ -0.4
COL8A1-201ENST00000261037 TUBGCP3Q96CW5 907 aa12.52□□□□□ -0.4
COL8A1-201ENST00000261037 MAGEB10Q96LZ2 347 aaPredicted RBP12.52□□□□□ -0.4
COL8A1-201ENST00000261037 RERGLQ9H628 205 aa12.52□□□□□ -0.4
COL8A1-201ENST00000261037 UBP1Q9NZI7 540 aa12.52□□□□□ -0.4
COL8A1-201ENST00000261037 EVPLLA8MZ36 301 aa12.52□□□□□ -0.41
COL8A1-201ENST00000261037 CPSF4O95639 269 aaKnown RBP12.52□□□□□ -0.41
COL8A1-201ENST00000261037 CAP2P40123 477 aa12.52□□□□□ -0.41
COL8A1-201ENST00000261037 NPTX2P47972 431 aa12.52□□□□□ -0.41
COL8A1-201ENST00000261037 ATN1P54259 1190 aaPredicted RBP12.52□□□□□ -0.41
COL8A1-201ENST00000261037 DNAJC9Q8WXX5 260 aa12.52□□□□□ -0.41
COL8A1-201ENST00000261037 TRPC5OSA6NMA1 111 aa12.52□□□□□ -0.41
COL8A1-201ENST00000261037 F8W810 466 aa12.52□□□□□ -0.41
COL8A1-201ENST00000261037 LZTS3O60299 673 aaPredicted RBP12.52□□□□□ -0.41
COL8A1-201ENST00000261037 FAM107AO95990 144 aa12.52□□□□□ -0.41
COL8A1-201ENST00000261037 SUPT20HL2P0C7V6 817 aa12.52□□□□□ -0.41
COL8A1-201ENST00000261037 DNAJB2P25686 324 aa12.52□□□□□ -0.41
COL8A1-201ENST00000261037 GTF2A2P52657 109 aa12.52□□□□□ -0.41
COL8A1-201ENST00000261037 TP53BP2Q13625 1128 aa12.52□□□□□ -0.41
COL8A1-201ENST00000261037 POLD3Q15054 466 aaPredicted RBP12.52□□□□□ -0.41
COL8A1-201ENST00000261037 MTFR1Q15390 333 aa12.52□□□□□ -0.41
COL8A1-201ENST00000261037 SLFN11Q7Z7L1 901 aa12.52□□□□□ -0.41
COL8A1-201ENST00000261037 OOSP2Q86WS3 158 aa12.52□□□□□ -0.41
COL8A1-201ENST00000261037 UNC45BQ8IWX7 931 aa12.52□□□□□ -0.41
COL8A1-201ENST00000261037 MMGT1Q8N4V1 131 aa12.52□□□□□ -0.41
COL8A1-201ENST00000261037 PIF1Q9H611 641 aa12.52□□□□□ -0.41
COL8A1-201ENST00000261037 GPR182O15218 404 aa12.52□□□□□ -0.41
COL8A1-201ENST00000261037 RGS2P41220 211 aa12.52□□□□□ -0.41
COL8A1-201ENST00000261037 OTUD4Q01804 1114 aaKnown RBP12.52□□□□□ -0.41
COL8A1-201ENST00000261037 NFIAQ12857 509 aa12.52□□□□□ -0.41
COL8A1-201ENST00000261037 UGT3A1Q6NUS8 523 aa12.52□□□□□ -0.41
COL8A1-201ENST00000261037 EIF3LQ9Y262 564 aaKnown RBP12.52□□□□□ -0.41
COL8A1-201ENST00000261037 IQSEC2Q5JU85 1478 aa12.52□□□□□ -0.41
COL8A1-201ENST00000261037 CCT8L1PA6NM43 557 aa12.51□□□□□ -0.41
COL8A1-201ENST00000261037 CYP11B1P15538 503 aa12.51□□□□□ -0.41
COL8A1-201ENST00000261037 PRIM2P49643 509 aa12.51□□□□□ -0.41
COL8A1-201ENST00000261037 COPAP53621 1224 aa12.51□□□□□ -0.41
COL8A1-201ENST00000261037 TNIP2Q8NFZ5 429 aa12.51□□□□□ -0.41
COL8A1-201ENST00000261037 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.51□□□□□ -0.41
COL8A1-201ENST00000261037 SYN2Q92777 582 aaPredicted RBP12.51□□□□□ -0.41
COL8A1-201ENST00000261037 MAP3K14Q99558 947 aa12.51□□□□□ -0.41
COL8A1-201ENST00000261037 TMEM121Q9BTD3 319 aa12.51□□□□□ -0.41
COL8A1-201ENST00000261037 CEP41Q9BYV8 373 aa12.51□□□□□ -0.41
COL8A1-201ENST00000261037 SCN3BQ9NY72 215 aa12.51□□□□□ -0.41
COL8A1-201ENST00000261037 ADGRB1O14514 1584 aa12.51□□□□□ -0.41
COL8A1-201ENST00000261037 A0A087X0T9 212 aa12.51□□□□□ -0.41
COL8A1-201ENST00000261037 GSNP06396 782 aa12.51□□□□□ -0.41
COL8A1-201ENST00000261037 FAM228BP0C875 321 aa12.51□□□□□ -0.41
COL8A1-201ENST00000261037 ATP6V1B1P15313 513 aa12.51□□□□□ -0.41
COL8A1-201ENST00000261037 OXCT1P55809 520 aa12.51□□□□□ -0.41
COL8A1-201ENST00000261037 CTXN3Q4LDR2 81 aa12.51□□□□□ -0.41
COL8A1-201ENST00000261037 EMC1Q8N766 993 aa12.51□□□□□ -0.41
COL8A1-201ENST00000261037 ZNF614Q8N883 585 aa12.51□□□□□ -0.41
COL8A1-201ENST00000261037 DAGLBQ8NCG7 672 aa12.51□□□□□ -0.41
COL8A1-201ENST00000261037 GLT1D1Q96MS3 346 aa12.51□□□□□ -0.41
COL8A1-201ENST00000261037 RBBP8Q99708 897 aa12.51□□□□□ -0.41
COL8A1-201ENST00000261037 VPS33BQ9H267 617 aa12.51□□□□□ -0.41
COL8A1-201ENST00000261037 SEMA6BQ9H3T3 888 aa12.51□□□□□ -0.41
COL8A1-201ENST00000261037 SLC40A1Q9NP59 571 aa12.51□□□□□ -0.41
COL8A1-201ENST00000261037 CAB39Q9Y376 341 aaPredicted RBP12.51□□□□□ -0.41
COL8A1-201ENST00000261037 GIT2Q14161 759 aa12.51□□□□□ -0.41
COL8A1-201ENST00000261037 AGAP9Q5VTM2 703 aa12.51□□□□□ -0.41
COL8A1-201ENST00000261037 CENPLQ8N0S6 344 aaPredicted RBP12.51□□□□□ -0.41
COL8A1-201ENST00000261037 RIBC1Q8N443 379 aaPredicted RBP12.51□□□□□ -0.41
COL8A1-201ENST00000261037 MAGED4Q96JG8 741 aa12.51□□□□□ -0.41
COL8A1-201ENST00000261037 TIMM13Q9Y5L4 95 aaPredicted RBP12.51□□□□□ -0.41
COL8A1-201ENST00000261037 H7C4K7 107 aa12.51□□□□□ -0.41
COL8A1-201ENST00000261037 OGTO15294 1046 aa12.51□□□□□ -0.41
COL8A1-201ENST00000261037 SERPINB8P50452 374 aa12.51□□□□□ -0.41
COL8A1-201ENST00000261037 PDIA6Q15084 440 aa12.51□□□□□ -0.41
COL8A1-201ENST00000261037 PLEKHH3Q7Z736 793 aa12.51□□□□□ -0.41
COL8A1-201ENST00000261037 DEFB128Q7Z7B8 93 aa12.51□□□□□ -0.41
COL8A1-201ENST00000261037 ZSWIM2Q8NEG5 633 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms