RNA–Protein interactions for RNA: ENST00000258607.9

CKAP2-201, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CKAP2, Length 3,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-201ENST00000258607 DENND5BQ6ZUT9 1274 aa9.52□□□□□ -0.89
CKAP2-201ENST00000258607 SIX6OS1Q8N1H7 587 aa9.52□□□□□ -0.89
CKAP2-201ENST00000258607 ZNF473Q8WTR7 871 aaKnown RBP9.52□□□□□ -0.89
CKAP2-201ENST00000258607 TBC1D31Q96DN5 1066 aa9.52□□□□□ -0.89
CKAP2-201ENST00000258607 INTUQ9ULD6 942 aa9.52□□□□□ -0.89
CKAP2-201ENST00000258607 KCNH4Q9UQ05 1017 aa9.52□□□□□ -0.89
CKAP2-201ENST00000258607 CDY2AQ9Y6F7 541 aa9.52□□□□□ -0.89
CKAP2-201ENST00000258607 ANKRD12Q6UB98 2062 aa9.51□□□□□ -0.89
CKAP2-201ENST00000258607 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.51□□□□□ -0.89
CKAP2-201ENST00000258607 M0QYT0 321 aa9.51□□□□□ -0.89
CKAP2-201ENST00000258607 MDM4O15151 490 aa9.51□□□□□ -0.89
CKAP2-201ENST00000258607 ATP9BO43861 1147 aa9.51□□□□□ -0.89
CKAP2-201ENST00000258607 NCAM1P13591 858 aa9.51□□□□□ -0.89
CKAP2-201ENST00000258607 BDNFP23560 247 aa9.51□□□□□ -0.89
CKAP2-201ENST00000258607 PSEN2P49810 448 aa9.51□□□□□ -0.89
CKAP2-201ENST00000258607 TUBB4BP68371 445 aa9.51□□□□□ -0.89
CKAP2-201ENST00000258607 PKN2Q16513 984 aaKnown RBP9.51□□□□□ -0.89
CKAP2-201ENST00000258607 SPRED3Q2MJR0 410 aa9.51□□□□□ -0.89
CKAP2-201ENST00000258607 ZNF792Q3KQV3 632 aa9.51□□□□□ -0.89
CKAP2-201ENST00000258607 MSS51Q4VC12 460 aa9.51□□□□□ -0.89
CKAP2-201ENST00000258607 FBXO47Q5MNV8 452 aa9.51□□□□□ -0.89
CKAP2-201ENST00000258607 TRNP1Q6NT89 227 aa9.51□□□□□ -0.89
CKAP2-201ENST00000258607 NOTUMQ6P988 496 aa9.51□□□□□ -0.89
CKAP2-201ENST00000258607 ENOSF1Q7L5Y1 443 aa9.51□□□□□ -0.89
CKAP2-201ENST00000258607 ARFGAP1Q8N6T3 406 aa9.51□□□□□ -0.89
CKAP2-201ENST00000258607 APPL2Q8NEU8 664 aa9.51□□□□□ -0.89
CKAP2-201ENST00000258607 BEST2Q8NFU1 509 aa9.51□□□□□ -0.89
CKAP2-201ENST00000258607 MOCOSQ96EN8 888 aa9.51□□□□□ -0.89
CKAP2-201ENST00000258607 CALR3Q96L12 384 aaKnown RBP9.51□□□□□ -0.89
CKAP2-201ENST00000258607 JPH2Q9BR39 696 aaPredicted RBP9.51□□□□□ -0.89
CKAP2-201ENST00000258607 TACO1Q9BSH4 297 aaKnown RBP9.51□□□□□ -0.89
CKAP2-201ENST00000258607 SHCBP1LQ9BZQ2 653 aa9.51□□□□□ -0.89
CKAP2-201ENST00000258607 KRT82Q9NSB4 513 aa9.51□□□□□ -0.89
CKAP2-201ENST00000258607 ABI2Q9NYB9 513 aaPredicted RBP9.51□□□□□ -0.89
CKAP2-201ENST00000258607 XPO7Q9UIA9 1087 aaKnown RBP9.51□□□□□ -0.89
CKAP2-201ENST00000258607 TMEM59LQ9UK28 342 aa9.51□□□□□ -0.89
CKAP2-201ENST00000258607 ST3GAL5Q9UNP4 418 aa9.51□□□□□ -0.89
CKAP2-201ENST00000258607 TNFSF13BQ9Y275 285 aa9.51□□□□□ -0.89
CKAP2-201ENST00000258607 DNAJC25-GNG10A0A024R161 153 aa9.51□□□□□ -0.89
CKAP2-201ENST00000258607 TTC24A2A3L6 582 aaPredicted RBP9.51□□□□□ -0.89
CKAP2-201ENST00000258607 MYBPHLA2RUH7 354 aa9.51□□□□□ -0.89
CKAP2-201ENST00000258607 GOT1P17174 413 aa9.51□□□□□ -0.89
CKAP2-201ENST00000258607 CCND3P30281 292 aaPredicted RBP9.51□□□□□ -0.89
CKAP2-201ENST00000258607 HOXA11P31270 313 aaPredicted RBP9.51□□□□□ -0.89
CKAP2-201ENST00000258607 MAN1A1P33908 653 aa9.51□□□□□ -0.89
CKAP2-201ENST00000258607 HSPA9P38646 679 aaKnown RBP9.51□□□□□ -0.89
CKAP2-201ENST00000258607 MYBPC2Q14324 1141 aa9.51□□□□□ -0.89
CKAP2-201ENST00000258607 E2F5Q15329 346 aa9.51□□□□□ -0.89
CKAP2-201ENST00000258607 C15orf39Q6ZRI6 1047 aa9.51□□□□□ -0.89
CKAP2-201ENST00000258607 TSHZ1Q6ZSZ6 1077 aa9.51□□□□□ -0.89
CKAP2-201ENST00000258607 PLPPR4Q7Z2D5 763 aa9.51□□□□□ -0.89
CKAP2-201ENST00000258607 DEFB128Q7Z7B8 93 aa9.51□□□□□ -0.89
CKAP2-201ENST00000258607 MIB1Q86YT6 1006 aa9.51□□□□□ -0.89
CKAP2-201ENST00000258607 RASGEF1CQ8N431 466 aa9.51□□□□□ -0.89
CKAP2-201ENST00000258607 DCLK2Q8N568 766 aa9.51□□□□□ -0.89
CKAP2-201ENST00000258607 PPTC7Q8NI37 304 aa9.51□□□□□ -0.89
CKAP2-201ENST00000258607 EMID1Q96A84 441 aaPredicted RBP9.51□□□□□ -0.89
CKAP2-201ENST00000258607 HVCN1Q96D96 273 aa9.51□□□□□ -0.89
CKAP2-201ENST00000258607 TMEM209Q96SK2 561 aa9.51□□□□□ -0.89
CKAP2-201ENST00000258607 PPP1R12CQ9BZL4 782 aa9.51□□□□□ -0.89
CKAP2-201ENST00000258607 AGO3Q9H9G7 860 aaKnown RBP9.51□□□□□ -0.89
CKAP2-201ENST00000258607 NINJ2Q9NZG7 142 aa9.51□□□□□ -0.89
CKAP2-201ENST00000258607 FER1L6Q2WGJ9 1857 aa9.51□□□□□ -0.89
CKAP2-201ENST00000258607 KPNA7A9QM74 516 aa9.5□□□□□ -0.89
CKAP2-201ENST00000258607 MSI1O43347 362 aaKnown RBP9.5□□□□□ -0.89
CKAP2-201ENST00000258607 SLC26A4O43511 780 aa9.5□□□□□ -0.89
CKAP2-201ENST00000258607 ENDOD1O94919 500 aa9.5□□□□□ -0.89
CKAP2-201ENST00000258607 CYP1A1P04798 512 aaPredicted RBP9.5□□□□□ -0.89
CKAP2-201ENST00000258607 ITGB1P05556 798 aa9.5□□□□□ -0.89
CKAP2-201ENST00000258607 TKTP29401 623 aaKnown RBP9.5□□□□□ -0.89
CKAP2-201ENST00000258607 SULT1E1P49888 294 aa9.5□□□□□ -0.89
CKAP2-201ENST00000258607 ACTN3Q08043 901 aaPredicted RBP9.5□□□□□ -0.89
CKAP2-201ENST00000258607 SOWAHAQ2M3V2 549 aa9.5□□□□□ -0.89
CKAP2-201ENST00000258607 TFDP3Q5H9I0 405 aa9.5□□□□□ -0.89
CKAP2-201ENST00000258607 XYLT1Q86Y38 959 aa9.5□□□□□ -0.89
CKAP2-201ENST00000258607 ADGRF2Q8IZF7 708 aa9.5□□□□□ -0.89
CKAP2-201ENST00000258607 DEFB106AQ8N104 65 aa9.5□□□□□ -0.89
CKAP2-201ENST00000258607 CCDC185Q8N715 623 aa9.5□□□□□ -0.89
CKAP2-201ENST00000258607 MYCBPAPQ8TBZ2 947 aa9.5□□□□□ -0.89
CKAP2-201ENST00000258607 CAVIN3Q969G5 261 aa9.5□□□□□ -0.89
CKAP2-201ENST00000258607 IPPQ9Y573 584 aa9.5□□□□□ -0.89
CKAP2-201ENST00000258607 IGKV6D-21A0A0A0MT36 114 aa9.5□□□□□ -0.89
CKAP2-201ENST00000258607 C17orf102A2RUQ5 167 aa9.5□□□□□ -0.89
CKAP2-201ENST00000258607 UGT1A9O60656 530 aa9.5□□□□□ -0.89
CKAP2-201ENST00000258607 CTGFP29279 349 aa9.5□□□□□ -0.89
CKAP2-201ENST00000258607 OR1G1P47890 313 aa9.5□□□□□ -0.89
CKAP2-201ENST00000258607 GATMP50440 423 aa9.5□□□□□ -0.89
CKAP2-201ENST00000258607 ITKQ08881 620 aa9.5□□□□□ -0.89
CKAP2-201ENST00000258607 MROH9Q5TGP6 573 aa9.5□□□□□ -0.89
CKAP2-201ENST00000258607 SYPL2Q5VXT5 272 aa9.5□□□□□ -0.89
CKAP2-201ENST00000258607 CCDC121Q6ZUS5 278 aa9.5□□□□□ -0.89
CKAP2-201ENST00000258607 PIGZQ86VD9 579 aa9.5□□□□□ -0.89
CKAP2-201ENST00000258607 FMNL3Q8IVF7 1028 aa9.5□□□□□ -0.89
CKAP2-201ENST00000258607 FBXO36Q8NEA4 188 aa9.5□□□□□ -0.89
CKAP2-201ENST00000258607 SCAMP5Q8TAC9 235 aa9.5□□□□□ -0.89
CKAP2-201ENST00000258607 ZNF518BQ9C0D4 1074 aa9.5□□□□□ -0.89
CKAP2-201ENST00000258607 TRPV6Q9H1D0 765 aa9.5□□□□□ -0.89
CKAP2-201ENST00000258607 TMEM134Q9H6X4 195 aa9.5□□□□□ -0.89
CKAP2-201ENST00000258607 UGT1A7Q9HAW7 530 aa9.5□□□□□ -0.89
CKAP2-201ENST00000258607 UGT1A10Q9HAW8 530 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms