RNA–Protein interactions for RNA: ENST00000257262.12

TMEM258-201, Transcript of transmembrane protein 258, humanhuman

TSL 3

Gene TMEM258, Length 468 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-201ENST00000257262 TNFRSF10BO14763 440 aa9.03□□□□□ -0.96
TMEM258-201ENST00000257262 TADA3O75528 432 aa9.03□□□□□ -0.96
TMEM258-201ENST00000257262 SLC9A1P19634 815 aa9.03□□□□□ -0.96
TMEM258-201ENST00000257262 ACO1P21399 889 aaKnown RBP9.03□□□□□ -0.96
TMEM258-201ENST00000257262 TBXAS1P24557 533 aaPredicted RBP9.03□□□□□ -0.96
TMEM258-201ENST00000257262 GRM2Q14416 872 aa9.03□□□□□ -0.96
TMEM258-201ENST00000257262 KCNJ12Q14500 433 aa9.03□□□□□ -0.96
TMEM258-201ENST00000257262 TSR1Q2NL82 804 aaKnown RBP9.03□□□□□ -0.96
TMEM258-201ENST00000257262 TXNDC8Q6A555 127 aa9.03□□□□□ -0.96
TMEM258-201ENST00000257262 PHLDB3Q6NSJ2 640 aa9.03□□□□□ -0.96
TMEM258-201ENST00000257262 VITQ6UXI7 678 aa9.03□□□□□ -0.96
TMEM258-201ENST00000257262 ARID3BQ8IVW6 561 aaPredicted RBP9.03□□□□□ -0.96
TMEM258-201ENST00000257262 NUP93Q8N1F7 819 aa9.03□□□□□ -0.96
TMEM258-201ENST00000257262 PPM1KQ8N3J5 372 aa9.03□□□□□ -0.96
TMEM258-201ENST00000257262 UBR7Q8N806 425 aa9.03□□□□□ -0.96
TMEM258-201ENST00000257262 MAB21L3Q8N8X9 362 aa9.03□□□□□ -0.96
TMEM258-201ENST00000257262 SCAMP5Q8TAC9 235 aa9.03□□□□□ -0.96
TMEM258-201ENST00000257262 MRPS31Q92665 395 aaKnown RBP9.03□□□□□ -0.96
TMEM258-201ENST00000257262 PBXIP1Q96AQ6 731 aa9.03□□□□□ -0.96
TMEM258-201ENST00000257262 RSPRY1Q96DX4 576 aa9.03□□□□□ -0.96
TMEM258-201ENST00000257262 SMARCD1Q96GM5 515 aa9.03□□□□□ -0.96
TMEM258-201ENST00000257262 CYP2S1Q96SQ9 504 aa9.03□□□□□ -0.96
TMEM258-201ENST00000257262 TUBGCP2Q9BSJ2 902 aa9.03□□□□□ -0.96
TMEM258-201ENST00000257262 CRACR2AQ9BSW2 395 aa9.03□□□□□ -0.96
TMEM258-201ENST00000257262 INTS2Q9H0H0 1204 aaKnown RBP9.03□□□□□ -0.96
TMEM258-201ENST00000257262 SMG9Q9H0W8 520 aaKnown RBP9.03□□□□□ -0.96
TMEM258-201ENST00000257262 TRPV4Q9HBA0 871 aa9.03□□□□□ -0.96
TMEM258-201ENST00000257262 DMAP1Q9NPF5 467 aaPredicted RBP9.03□□□□□ -0.96
TMEM258-201ENST00000257262 ANO10Q9NW15 660 aa9.03□□□□□ -0.96
TMEM258-201ENST00000257262 EHD2Q9NZN4 543 aa9.03□□□□□ -0.96
TMEM258-201ENST00000257262 NFE2L3Q9Y4A8 694 aa9.03□□□□□ -0.96
TMEM258-201ENST00000257262 PATJQ8NI35 1801 aa9.03□□□□□ -0.96
TMEM258-201ENST00000257262 NCANO14594 1321 aa9.03□□□□□ -0.96
TMEM258-201ENST00000257262 C2orf78A6NCI8 922 aa9.02□□□□□ -0.97
TMEM258-201ENST00000257262 SOBPA7XYQ1 873 aa9.02□□□□□ -0.97
TMEM258-201ENST00000257262 HEPACAM2A8MVW5 462 aa9.02□□□□□ -0.97
TMEM258-201ENST00000257262 RTN3O95197 1032 aaPredicted RBP9.02□□□□□ -0.97
TMEM258-201ENST00000257262 PDGFBP01127 241 aaPredicted RBP9.02□□□□□ -0.97
TMEM258-201ENST00000257262 FAM200BP0CF97 657 aa9.02□□□□□ -0.97
TMEM258-201ENST00000257262 PSMC3P17980 439 aa9.02□□□□□ -0.97
TMEM258-201ENST00000257262 YWHAQP27348 245 aa9.02□□□□□ -0.97
TMEM258-201ENST00000257262 WEE1P30291 646 aa9.02□□□□□ -0.97
TMEM258-201ENST00000257262 AVPR1AP37288 418 aa9.02□□□□□ -0.97
TMEM258-201ENST00000257262 SLC5A3P53794 718 aa9.02□□□□□ -0.97
TMEM258-201ENST00000257262 YWHAEP62258 255 aaKnown RBP9.02□□□□□ -0.97
TMEM258-201ENST00000257262 GCNT1Q02742 428 aa9.02□□□□□ -0.97
TMEM258-201ENST00000257262 TAF10Q12962 218 aa9.02□□□□□ -0.97
TMEM258-201ENST00000257262 STX1AQ16623 288 aa9.02□□□□□ -0.97
TMEM258-201ENST00000257262 MAN2A1Q16706 1144 aa9.02□□□□□ -0.97
TMEM258-201ENST00000257262 VWA3BQ502W6 1294 aa9.02□□□□□ -0.97
TMEM258-201ENST00000257262 TCP11X2Q5H9J9 407 aa9.02□□□□□ -0.97
TMEM258-201ENST00000257262 MIIPQ5JXC2 388 aa9.02□□□□□ -0.97
TMEM258-201ENST00000257262 GJB7Q6PEY0 223 aa9.02□□□□□ -0.97
TMEM258-201ENST00000257262 TMEM270Q6UE05 265 aa9.02□□□□□ -0.97
TMEM258-201ENST00000257262 THSD4Q6ZMP0 1018 aa9.02□□□□□ -0.97
TMEM258-201ENST00000257262 CLEC20AQ6ZU45 233 aa9.02□□□□□ -0.97
TMEM258-201ENST00000257262 HFE2Q6ZVN8 426 aa9.02□□□□□ -0.97
TMEM258-201ENST00000257262 BMP8AQ7Z5Y6 402 aa9.02□□□□□ -0.97
TMEM258-201ENST00000257262 MON1AQ86VX9 555 aa9.02□□□□□ -0.97
TMEM258-201ENST00000257262 MFSD6LQ8IWD5 586 aa9.02□□□□□ -0.97
TMEM258-201ENST00000257262 CMTM8Q8IZV2 173 aa9.02□□□□□ -0.97
TMEM258-201ENST00000257262 E2F7Q96AV8 911 aa9.02□□□□□ -0.97
TMEM258-201ENST00000257262 LRRC3BQ96PB8 259 aa9.02□□□□□ -0.97
TMEM258-201ENST00000257262 TRMT61BQ9BVS5 477 aaKnown RBP9.02□□□□□ -0.97
TMEM258-201ENST00000257262 TTLL2Q9BWV7 592 aa9.02□□□□□ -0.97
TMEM258-201ENST00000257262 DUSP16Q9BY84 665 aa9.02□□□□□ -0.97
TMEM258-201ENST00000257262 NDST4Q9H3R1 872 aa9.02□□□□□ -0.97
TMEM258-201ENST00000257262 TRPC7Q9HCX4 862 aa9.02□□□□□ -0.97
TMEM258-201ENST00000257262 UBE2TQ9NPD8 197 aaPredicted RBP9.02□□□□□ -0.97
TMEM258-201ENST00000257262 SLC2A4RGQ9NR83 387 aa9.02□□□□□ -0.97
TMEM258-201ENST00000257262 KRT82Q9NSB4 513 aa9.02□□□□□ -0.97
TMEM258-201ENST00000257262 FANCLQ9NW38 375 aa9.02□□□□□ -0.97
TMEM258-201ENST00000257262 TRPM5Q9NZQ8 1165 aa9.02□□□□□ -0.97
TMEM258-201ENST00000257262 GCNT4Q9P109 453 aa9.02□□□□□ -0.97
TMEM258-201ENST00000257262 WNT16Q9UBV4 365 aa9.02□□□□□ -0.97
TMEM258-201ENST00000257262 CHORDC1Q9UHD1 332 aaPredicted RBP9.02□□□□□ -0.97
TMEM258-201ENST00000257262 FBXL21Q9UKT6 434 aa9.02□□□□□ -0.97
TMEM258-201ENST00000257262 CA14Q9ULX7 337 aa9.02□□□□□ -0.97
TMEM258-201ENST00000257262 PCDHB4Q9Y5E5 795 aa9.02□□□□□ -0.97
TMEM258-201ENST00000257262 TRIOO75962 3097 aa9.02□□□□□ -0.97
TMEM258-201ENST00000257262 COL4A3Q01955 1670 aa9.01□□□□□ -0.97
TMEM258-201ENST00000257262 KRBA1A5PL33 1030 aa9.01□□□□□ -0.97
TMEM258-201ENST00000257262 ZNF840PA6NDX5 716 aa9.01□□□□□ -0.97
TMEM258-201ENST00000257262 HHLA1C9JL84 531 aa9.01□□□□□ -0.97
TMEM258-201ENST00000257262 PRAMEF12O95522 483 aa9.01□□□□□ -0.97
TMEM258-201ENST00000257262 ABL1P00519 1130 aa9.01□□□□□ -0.97
TMEM258-201ENST00000257262 CALCAP01258 141 aa9.01□□□□□ -0.97
TMEM258-201ENST00000257262 COL4A2P08572 1712 aa9.01□□□□□ -0.97
TMEM258-201ENST00000257262 VDRP11473 427 aa9.01□□□□□ -0.97
TMEM258-201ENST00000257262 CD19P15391 556 aa9.01□□□□□ -0.97
TMEM258-201ENST00000257262 NPR3P17342 541 aa9.01□□□□□ -0.97
TMEM258-201ENST00000257262 HDCP19113 662 aa9.01□□□□□ -0.97
TMEM258-201ENST00000257262 DDX6P26196 483 aaKnown RBP eCLIP9.01□□□□□ -0.973e-6■■□□□ 13.6
TMEM258-201ENST00000257262 EEF1GP26641 437 aaKnown RBP9.01□□□□□ -0.97
TMEM258-201ENST00000257262 PON1P27169 355 aa9.01□□□□□ -0.97
TMEM258-201ENST00000257262 GDI1P31150 447 aa9.01□□□□□ -0.97
TMEM258-201ENST00000257262 PPP3CCP48454 512 aa9.01□□□□□ -0.97
TMEM258-201ENST00000257262 APBA1Q02410 837 aa9.01□□□□□ -0.97
TMEM258-201ENST00000257262 TYRO3Q06418 890 aa9.01□□□□□ -0.97
TMEM258-201ENST00000257262 KLHL40Q2TBA0 621 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms