RNA–Protein interactions for RNA: ENST00000249014.4

CDC42EP1-201, Transcript of CDC42 effector protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDC42EP1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-201ENST00000249014 GALNTL6Q49A17 601 aa20.44■□□□□ 0.86
CDC42EP1-201ENST00000249014 FAM47EQ6ZV65 393 aa20.44■□□□□ 0.86
CDC42EP1-201ENST00000249014 FBXO36Q8NEA4 188 aa20.44■□□□□ 0.86
CDC42EP1-201ENST00000249014 SPOCK2Q92563 424 aa20.44■□□□□ 0.86
CDC42EP1-201ENST00000249014 KIF12Q96FN5 646 aa20.44■□□□□ 0.86
CDC42EP1-201ENST00000249014 RMDN2Q96LZ7 410 aa20.44■□□□□ 0.86
CDC42EP1-201ENST00000249014 SMC6Q96SB8 1091 aa20.44■□□□□ 0.86
CDC42EP1-201ENST00000249014 MAK16Q9BXY0 300 aaKnown RBP20.44■□□□□ 0.86
CDC42EP1-201ENST00000249014 PHACTR1Q9C0D0 580 aa20.44■□□□□ 0.86
CDC42EP1-201ENST00000249014 TUT1Q9H6E5 874 aaKnown RBP20.44■□□□□ 0.86
CDC42EP1-201ENST00000249014 VTA1Q9NP79 307 aa20.44■□□□□ 0.86
CDC42EP1-201ENST00000249014 PSMC3IPQ9P2W1 217 aaPredicted RBP20.44■□□□□ 0.86
CDC42EP1-201ENST00000249014 RGS7P49802 495 aa20.43■□□□□ 0.86
CDC42EP1-201ENST00000249014 GEMIN4P57678 1058 aaKnown RBP20.43■□□□□ 0.86
CDC42EP1-201ENST00000249014 SNAPC2Q13487 334 aa20.43■□□□□ 0.86
CDC42EP1-201ENST00000249014 DPYSL3Q14195 570 aa20.43■□□□□ 0.86
CDC42EP1-201ENST00000249014 KYAT1Q16773 422 aa20.43■□□□□ 0.86
CDC42EP1-201ENST00000249014 C3orf62Q6ZUJ4 267 aa20.43■□□□□ 0.86
CDC42EP1-201ENST00000249014 ZC3H18Q86VM9 953 aaKnown RBP20.43■□□□□ 0.86
CDC42EP1-201ENST00000249014 GPRC5AQ8NFJ5 357 aa20.43■□□□□ 0.86
CDC42EP1-201ENST00000249014 NT5C1AQ9BXI3 368 aa20.43■□□□□ 0.86
CDC42EP1-201ENST00000249014 GBA2Q9HCG7 927 aaPredicted RBP20.43■□□□□ 0.86
CDC42EP1-201ENST00000249014 XPO7Q9UIA9 1087 aaKnown RBP20.43■□□□□ 0.86
CDC42EP1-201ENST00000249014 RBM47A0AV96 593 aaKnown RBP20.42■□□□□ 0.86
CDC42EP1-201ENST00000249014 STAU1O95793 577 aaKnown RBP20.42■□□□□ 0.86
CDC42EP1-201ENST00000249014 SLC18A1P54219 525 aa20.42■□□□□ 0.86
CDC42EP1-201ENST00000249014 BASP1P80723 227 aaKnown RBP20.42■□□□□ 0.86
CDC42EP1-201ENST00000249014 NOMO1Q15155 1222 aa20.42■□□□□ 0.86
CDC42EP1-201ENST00000249014 PARP9Q8IXQ6 854 aa20.42■□□□□ 0.86
CDC42EP1-201ENST00000249014 FITM2Q8N6M3 262 aa20.42■□□□□ 0.86
CDC42EP1-201ENST00000249014 ATP11CQ8NB49 1132 aa20.42■□□□□ 0.86
CDC42EP1-201ENST00000249014 EMID1Q96A84 441 aaPredicted RBP20.42■□□□□ 0.86
CDC42EP1-201ENST00000249014 PITPNM3Q9BZ71 974 aa20.42■□□□□ 0.86
CDC42EP1-201ENST00000249014 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.42■□□□□ 0.86
CDC42EP1-201ENST00000249014 SENP1Q9P0U3 644 aa20.42■□□□□ 0.86
CDC42EP1-201ENST00000249014 NME7Q9Y5B8 376 aa20.42■□□□□ 0.86
CDC42EP1-201ENST00000249014 PPEF2O14830 753 aa20.42■□□□□ 0.86
CDC42EP1-201ENST00000249014 TYROBPO43914 113 aa20.42■□□□□ 0.86
CDC42EP1-201ENST00000249014 SLC1A5Q15758 541 aa20.42■□□□□ 0.86
CDC42EP1-201ENST00000249014 GOLGA7BQ2TAP0 167 aa20.42■□□□□ 0.86
CDC42EP1-201ENST00000249014 PPP1R26Q5T8A7 1209 aaPredicted RBP20.42■□□□□ 0.86
CDC42EP1-201ENST00000249014 FBF1Q8TES7 1133 aa20.42■□□□□ 0.86
CDC42EP1-201ENST00000249014 MRPL45Q9BRJ2 306 aaKnown RBP20.42■□□□□ 0.86
CDC42EP1-201ENST00000249014 PPCSQ9HAB8 311 aa20.42■□□□□ 0.86
CDC42EP1-201ENST00000249014 CD248Q9HCU0 757 aa20.42■□□□□ 0.86
CDC42EP1-201ENST00000249014 SMG5Q9UPR3 1016 aaKnown RBP20.42■□□□□ 0.86
CDC42EP1-201ENST00000249014 SNAI1O95863 264 aaPredicted RBP20.41■□□□□ 0.86
CDC42EP1-201ENST00000249014 CA4P22748 312 aa20.41■□□□□ 0.86
CDC42EP1-201ENST00000249014 ELF3P78545 371 aaPredicted RBP20.41■□□□□ 0.86
CDC42EP1-201ENST00000249014 ATP11AP98196 1134 aa20.41■□□□□ 0.86
CDC42EP1-201ENST00000249014 DNAJC3Q13217 504 aa20.41■□□□□ 0.86
CDC42EP1-201ENST00000249014 GRIK4Q16099 956 aa20.41■□□□□ 0.86
CDC42EP1-201ENST00000249014 BBS9Q3SYG4 887 aa20.41■□□□□ 0.86
CDC42EP1-201ENST00000249014 CCDC14Q49A88 953 aa20.41■□□□□ 0.86
CDC42EP1-201ENST00000249014 PMF1Q6P1K2 205 aa20.41■□□□□ 0.86
CDC42EP1-201ENST00000249014 DHRS4Q9BTZ2 278 aa20.41■□□□□ 0.86
CDC42EP1-201ENST00000249014 PNMA3Q9UL41 463 aa20.41■□□□□ 0.86
CDC42EP1-201ENST00000249014 KIAA1257Q9ULG3 409 aa20.41■□□□□ 0.86
CDC42EP1-201ENST00000249014 PHBP35232 272 aa20.41■□□□□ 0.86
CDC42EP1-201ENST00000249014 GRM5P41594 1212 aa20.41■□□□□ 0.86
CDC42EP1-201ENST00000249014 NCALDP61601 193 aa20.41■□□□□ 0.86
CDC42EP1-201ENST00000249014 ROR1Q01973 937 aa20.41■□□□□ 0.86
CDC42EP1-201ENST00000249014 SPARCL1Q14515 664 aa20.41■□□□□ 0.86
CDC42EP1-201ENST00000249014 SYCP2LQ5T4T6 812 aa20.41■□□□□ 0.86
CDC42EP1-201ENST00000249014 LDLRAD1Q5T700 205 aa20.41■□□□□ 0.86
CDC42EP1-201ENST00000249014 DARS2Q6PI48 645 aaKnown RBP20.41■□□□□ 0.86
CDC42EP1-201ENST00000249014 FAM228AQ86W67 206 aa20.41■□□□□ 0.86
CDC42EP1-201ENST00000249014 TTC30AQ86WT1 665 aa20.41■□□□□ 0.86
CDC42EP1-201ENST00000249014 IGDCC3Q8IVU1 814 aa20.41■□□□□ 0.86
CDC42EP1-201ENST00000249014 CCDC63Q8NA47 563 aa20.41■□□□□ 0.86
CDC42EP1-201ENST00000249014 ZMAT2Q96NC0 199 aaKnown RBP20.41■□□□□ 0.86
CDC42EP1-201ENST00000249014 PAFAH2Q99487 392 aa20.41■□□□□ 0.86
CDC42EP1-201ENST00000249014 ACSS3Q9H6R3 686 aa20.41■□□□□ 0.86
CDC42EP1-201ENST00000249014 FETUBQ9UGM5 382 aa20.41■□□□□ 0.86
CDC42EP1-201ENST00000249014 PRPSAP2O60256 369 aa20.4■□□□□ 0.86
CDC42EP1-201ENST00000249014 MGRN1O60291 552 aa20.4■□□□□ 0.86
CDC42EP1-201ENST00000249014 KRT4P19013 534 aa20.4■□□□□ 0.86
CDC42EP1-201ENST00000249014 IL4RP24394 825 aa20.4■□□□□ 0.86
CDC42EP1-201ENST00000249014 BNIP1Q12981 228 aa20.4■□□□□ 0.86
CDC42EP1-201ENST00000249014 PKDCCQ504Y2 493 aa20.4■□□□□ 0.86
CDC42EP1-201ENST00000249014 ADGRD1Q6QNK2 874 aa20.4■□□□□ 0.86
CDC42EP1-201ENST00000249014 ACOT1Q86TX2 421 aa20.4■□□□□ 0.86
CDC42EP1-201ENST00000249014 ECHDC2Q86YB7 292 aa20.4■□□□□ 0.86
CDC42EP1-201ENST00000249014 NT5DC4Q86YG4 428 aa20.4■□□□□ 0.86
CDC42EP1-201ENST00000249014 ANKLE1Q8NAG6 615 aa20.4■□□□□ 0.86
CDC42EP1-201ENST00000249014 RNF157Q96PX1 679 aa20.4■□□□□ 0.86
CDC42EP1-201ENST00000249014 SLCO1B3Q9NPD5 702 aa20.4■□□□□ 0.86
CDC42EP1-201ENST00000249014 GPATCH2LQ9NWQ4 482 aa20.4■□□□□ 0.86
CDC42EP1-201ENST00000249014 RDXP35241 583 aaKnown RBP20.39■□□□□ 0.86
CDC42EP1-201ENST00000249014 KIZQ2M2Z5 673 aa20.39■□□□□ 0.86
CDC42EP1-201ENST00000249014 ZC3H12AQ5D1E8 599 aaKnown RBP20.39■□□□□ 0.86
CDC42EP1-201ENST00000249014 C9orf131Q5VYM1 1079 aa20.39■□□□□ 0.86
CDC42EP1-201ENST00000249014 C1orf228Q6PIY5 440 aa20.39■□□□□ 0.86
CDC42EP1-201ENST00000249014 OLFML1Q6UWY5 402 aa20.39■□□□□ 0.86
CDC42EP1-201ENST00000249014 USP50Q70EL3 339 aaPredicted RBP20.39■□□□□ 0.86
CDC42EP1-201ENST00000249014 TBC1D1Q86TI0 1168 aaPredicted RBP20.39■□□□□ 0.86
CDC42EP1-201ENST00000249014 PALM2Q8IXS6 379 aa20.39■□□□□ 0.86
CDC42EP1-201ENST00000249014 PDIK1LQ8N165 341 aa20.39■□□□□ 0.86
CDC42EP1-201ENST00000249014 MZB1Q8WU39 189 aa20.39■□□□□ 0.86
CDC42EP1-201ENST00000249014 KHSRPQ92945 711 aaKnown RBP eCLIP20.39■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms