RNA–Protein interactions for RNA: ENST00000244741.9

CDKN1A-201, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1A, Length 2,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-201ENST00000244741 ZDHHC18Q9NUE0 388 aa17.86■□□□□ 0.45
CDKN1A-201ENST00000244741 FAM187AA6NFU0 413 aa17.85■□□□□ 0.45
CDKN1A-201ENST00000244741 ATP2C2O75185 946 aa17.85■□□□□ 0.45
CDKN1A-201ENST00000244741 PYGMP11217 842 aa17.85■□□□□ 0.45
CDKN1A-201ENST00000244741 BRD2P25440 801 aaKnown RBP17.85■□□□□ 0.45
CDKN1A-201ENST00000244741 PTGIRP43119 386 aa17.85■□□□□ 0.45
CDKN1A-201ENST00000244741 RAD23BP54727 409 aa17.85■□□□□ 0.45
CDKN1A-201ENST00000244741 PSMC1P62191 440 aaKnown RBP17.85■□□□□ 0.45
CDKN1A-201ENST00000244741 HTRA4P83105 476 aaPredicted RBP17.85■□□□□ 0.45
CDKN1A-201ENST00000244741 DHX34Q14147 1143 aaKnown RBP17.85■□□□□ 0.45
CDKN1A-201ENST00000244741 FAM171A1Q5VUB5 890 aa17.85■□□□□ 0.45
CDKN1A-201ENST00000244741 CMTR2Q8IYT2 770 aaKnown RBP17.85■□□□□ 0.45
CDKN1A-201ENST00000244741 ZNF653Q96CK0 615 aa17.85■□□□□ 0.45
CDKN1A-201ENST00000244741 FAM81BQ96LP2 452 aa17.85■□□□□ 0.45
CDKN1A-201ENST00000244741 SLC9A7Q96T83 725 aa17.85■□□□□ 0.45
CDKN1A-201ENST00000244741 COLEC11Q9BWP8 271 aa17.85■□□□□ 0.45
CDKN1A-201ENST00000244741 TXLNGYQ9BZA5 131 aa17.85■□□□□ 0.45
CDKN1A-201ENST00000244741 MTIF3Q9H2K0 278 aaKnown RBP17.85■□□□□ 0.45
CDKN1A-201ENST00000244741 SNX25Q9H3E2 840 aa17.85■□□□□ 0.45
CDKN1A-201ENST00000244741 CYP3A43Q9HB55 503 aa17.85■□□□□ 0.45
CDKN1A-201ENST00000244741 MTUS1Q9ULD2 1270 aa17.85■□□□□ 0.45
CDKN1A-201ENST00000244741 BARX2Q9UMQ3 279 aaPredicted RBP17.85■□□□□ 0.45
CDKN1A-201ENST00000244741 INSL6Q9Y581 213 aa17.85■□□□□ 0.45
CDKN1A-201ENST00000244741 PHF2O75151 1096 aa17.84■□□□□ 0.45
CDKN1A-201ENST00000244741 CD19P15391 556 aa17.84■□□□□ 0.45
CDKN1A-201ENST00000244741 CTNNA2P26232 953 aa17.84■□□□□ 0.45
CDKN1A-201ENST00000244741 PDE6CP51160 858 aa17.84■□□□□ 0.45
CDKN1A-201ENST00000244741 TOP6BLQ8N6T0 577 aa17.84■□□□□ 0.45
CDKN1A-201ENST00000244741 SLC4A11Q8NBS3 891 aa17.84■□□□□ 0.45
CDKN1A-201ENST00000244741 TFAP2BQ92481 460 aa17.84■□□□□ 0.45
CDKN1A-201ENST00000244741 HEXIM2Q96MH2 286 aaKnown RBP17.84■□□□□ 0.45
CDKN1A-201ENST00000244741 FMO2Q99518 471 aa17.84■□□□□ 0.45
CDKN1A-201ENST00000244741 RAD9AQ99638 391 aa17.84■□□□□ 0.45
CDKN1A-201ENST00000244741 GTF3C4Q9UKN8 822 aa17.84■□□□□ 0.45
CDKN1A-201ENST00000244741 SNX24Q9Y343 169 aa17.84■□□□□ 0.45
CDKN1A-201ENST00000244741 TCRBV7S2A1N4TA0A589 114 aa17.84■□□□□ 0.45
CDKN1A-201ENST00000244741 PPFIA2O75334 1257 aa17.84■□□□□ 0.45
CDKN1A-201ENST00000244741 ARHGEF15O94989 841 aa17.84■□□□□ 0.45
CDKN1A-201ENST00000244741 ODC1P11926 461 aa17.84■□□□□ 0.45
CDKN1A-201ENST00000244741 GNA15P30679 374 aa17.84■□□□□ 0.45
CDKN1A-201ENST00000244741 LSP1P33241 339 aa17.84■□□□□ 0.45
CDKN1A-201ENST00000244741 RASIP1Q5U651 963 aa17.84■□□□□ 0.45
CDKN1A-201ENST00000244741 TTC27Q6P3X3 843 aa17.84■□□□□ 0.45
CDKN1A-201ENST00000244741 FIBCD1Q8N539 461 aa17.84■□□□□ 0.45
CDKN1A-201ENST00000244741 MAGOHBQ96A72 148 aaKnown RBP17.84■□□□□ 0.45
CDKN1A-201ENST00000244741 SUSD3Q96L08 255 aa17.84■□□□□ 0.45
CDKN1A-201ENST00000244741 TMEM175Q9BSA9 504 aa17.84■□□□□ 0.45
CDKN1A-201ENST00000244741 LRRC4CQ9HCJ2 640 aa17.84■□□□□ 0.45
CDKN1A-201ENST00000244741 FAM49BQ9NUQ9 324 aa17.84■□□□□ 0.45
CDKN1A-201ENST00000244741 DDX43Q9NXZ2 648 aaKnown RBP17.84■□□□□ 0.45
CDKN1A-201ENST00000244741 SZT2Q5T011 3432 aa17.83■□□□□ 0.45
CDKN1A-201ENST00000244741 M0QZQ0 153 aa17.83■□□□□ 0.45
CDKN1A-201ENST00000244741 THAP12O43422 761 aa17.83■□□□□ 0.45
CDKN1A-201ENST00000244741 HPDP32754 393 aaPredicted RBP17.83■□□□□ 0.45
CDKN1A-201ENST00000244741 MDH1P40925 334 aaKnown RBP17.83■□□□□ 0.45
CDKN1A-201ENST00000244741 ZNF132P52740 706 aa17.83■□□□□ 0.45
CDKN1A-201ENST00000244741 INCA1Q0VD86 236 aa17.83■□□□□ 0.45
CDKN1A-201ENST00000244741 KIAA0319Q5VV43 1072 aa17.83■□□□□ 0.45
CDKN1A-201ENST00000244741 ACAD10Q6JQN1 1059 aa17.83■□□□□ 0.45
CDKN1A-201ENST00000244741 FUT10Q6P4F1 479 aa17.83■□□□□ 0.45
CDKN1A-201ENST00000244741 PASD1Q8IV76 773 aa17.83■□□□□ 0.45
CDKN1A-201ENST00000244741 COLGALT1Q8NBJ5 622 aa17.83■□□□□ 0.45
CDKN1A-201ENST00000244741 TMEM176AQ96HP8 235 aa17.83■□□□□ 0.45
CDKN1A-201ENST00000244741 ZNF558Q96NG5 402 aa17.83■□□□□ 0.45
CDKN1A-201ENST00000244741 VN1R3Q9BXE9 311 aa17.83■□□□□ 0.45
CDKN1A-201ENST00000244741 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.83■□□□□ 0.453e-8■■□□□ 12.9
CDKN1A-201ENST00000244741 CNTN6Q9UQ52 1028 aa17.83■□□□□ 0.45
CDKN1A-201ENST00000244741 ATP8A1Q9Y2Q0 1164 aa17.83■□□□□ 0.45
CDKN1A-201ENST00000244741 SPOPO43791 374 aa17.83■□□□□ 0.44
CDKN1A-201ENST00000244741 CHRNA3P32297 505 aa17.83■□□□□ 0.44
CDKN1A-201ENST00000244741 CORO7P57737 925 aa17.83■□□□□ 0.44
CDKN1A-201ENST00000244741 YWHAEP62258 255 aaKnown RBP17.83■□□□□ 0.44
CDKN1A-201ENST00000244741 SEL1L2Q5TEA6 688 aa17.83■□□□□ 0.44
CDKN1A-201ENST00000244741 ZDHHC24Q6UX98 284 aa17.83■□□□□ 0.44
CDKN1A-201ENST00000244741 LIMS2Q7Z4I7 341 aa17.83■□□□□ 0.44
CDKN1A-201ENST00000244741 IGSF21Q96ID5 467 aa17.83■□□□□ 0.44
CDKN1A-201ENST00000244741 TMEM209Q96SK2 561 aa17.83■□□□□ 0.44
CDKN1A-201ENST00000244741 GDF15Q99988 308 aa17.83■□□□□ 0.44
CDKN1A-201ENST00000244741 NT5C1AQ9BXI3 368 aa17.83■□□□□ 0.44
CDKN1A-201ENST00000244741 BCCIPQ9P287 314 aaKnown RBP eCLIP17.83■□□□□ 0.44
CDKN1A-201ENST00000244741 PCDHA3Q9Y5H8 950 aa17.83■□□□□ 0.44
CDKN1A-201ENST00000244741 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.83■□□□□ 0.44
CDKN1A-201ENST00000244741 TMEM189-UBE2V1I3L0A0 370 aa17.82■□□□□ 0.44
CDKN1A-201ENST00000244741 EBAG9O00559 213 aa17.82■□□□□ 0.44
CDKN1A-201ENST00000244741 C2CD2LO14523 706 aa17.82■□□□□ 0.44
CDKN1A-201ENST00000244741 PBX2P40425 430 aa17.82■□□□□ 0.44
CDKN1A-201ENST00000244741 DRG2P55039 364 aaKnown RBP17.82■□□□□ 0.44
CDKN1A-201ENST00000244741 PLTPP55058 493 aa17.82■□□□□ 0.44
CDKN1A-201ENST00000244741 CLEC16AQ2KHT3 1053 aa17.82■□□□□ 0.44
CDKN1A-201ENST00000244741 OVOS1Q6IE37 1185 aa17.82■□□□□ 0.44
CDKN1A-201ENST00000244741 PHOSPHO2Q8TCD6 241 aa17.82■□□□□ 0.44
CDKN1A-201ENST00000244741 UVRAGQ9P2Y5 699 aa17.82■□□□□ 0.44
CDKN1A-201ENST00000244741 PCYOX1Q9UHG3 505 aa17.82■□□□□ 0.44
CDKN1A-201ENST00000244741 LINC00271P0C7V0 271 aa17.81■□□□□ 0.44
CDKN1A-201ENST00000244741 PPARDQ03181 441 aa17.81■□□□□ 0.44
CDKN1A-201ENST00000244741 RTP2Q5QGT7 225 aa17.81■□□□□ 0.44
CDKN1A-201ENST00000244741 SLC13A5Q86YT5 568 aaPredicted RBP17.81■□□□□ 0.44
CDKN1A-201ENST00000244741 RTP3Q9BQQ7 232 aa17.81■□□□□ 0.44
CDKN1A-201ENST00000244741 EPN3Q9H201 632 aa17.81■□□□□ 0.44
CDKN1A-201ENST00000244741 GRHL1Q9NZI5 618 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms