RNA–Protein interactions for RNA: ENST00000239374.7

CCDC170-201, Transcript of coiled-coil domain containing 170, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC170, Length 5,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC170-201ENST00000239374 MRPS9P82933 396 aaKnown RBP11.44□□□□□ -0.58
CCDC170-201ENST00000239374 GABPAQ06546 454 aa11.44□□□□□ -0.58
CCDC170-201ENST00000239374 FAM167AQ96KS9 214 aa11.44□□□□□ -0.58
CCDC170-201ENST00000239374 PRMT6Q96LA8 375 aaPredicted RBP11.44□□□□□ -0.58
CCDC170-201ENST00000239374 USP18Q9UMW8 372 aa11.44□□□□□ -0.58
CCDC170-201ENST00000239374 ALOX15BO15296 676 aa11.44□□□□□ -0.58
CCDC170-201ENST00000239374 ETS2P15036 469 aa11.44□□□□□ -0.58
CCDC170-201ENST00000239374 SP100P23497 879 aaPredicted RBP11.44□□□□□ -0.58
CCDC170-201ENST00000239374 SLC25A3Q00325 362 aa11.44□□□□□ -0.58
CCDC170-201ENST00000239374 APOBEC3HQ6NTF7 200 aaKnown RBP11.44□□□□□ -0.58
CCDC170-201ENST00000239374 JADE3Q92613 823 aa11.44□□□□□ -0.58
CCDC170-201ENST00000239374 VPS39Q96JC1 886 aa11.44□□□□□ -0.58
CCDC170-201ENST00000239374 MRPL1Q9BYD6 325 aaKnown RBP11.44□□□□□ -0.58
CCDC170-201ENST00000239374 ING2Q9H160 280 aa11.44□□□□□ -0.58
CCDC170-201ENST00000239374 C2orf40Q9H1Z8 148 aa11.44□□□□□ -0.58
CCDC170-201ENST00000239374 KCNK4Q9NYG8 393 aa11.44□□□□□ -0.58
CCDC170-201ENST00000239374 C2orf71A6NGG8 1288 aa11.43□□□□□ -0.58
CCDC170-201ENST00000239374 WDR46O15213 610 aaKnown RBP11.43□□□□□ -0.58
CCDC170-201ENST00000239374 AKAP10O43572 662 aa11.43□□□□□ -0.58
CCDC170-201ENST00000239374 SMNDC1O75940 238 aaKnown RBP eCLIP11.43□□□□□ -0.58
CCDC170-201ENST00000239374 LCP1P13796 627 aa11.43□□□□□ -0.58
CCDC170-201ENST00000239374 ANPEPP15144 967 aa11.43□□□□□ -0.58
CCDC170-201ENST00000239374 RAG1P15918 1043 aa11.43□□□□□ -0.58
CCDC170-201ENST00000239374 YY1P25490 414 aa11.43□□□□□ -0.58
CCDC170-201ENST00000239374 SPRP35270 261 aaPredicted RBP11.43□□□□□ -0.58
CCDC170-201ENST00000239374 WDR4P57081 412 aaKnown RBP11.43□□□□□ -0.58
CCDC170-201ENST00000239374 BST1Q10588 318 aa11.43□□□□□ -0.58
CCDC170-201ENST00000239374 NME3Q13232 169 aa11.43□□□□□ -0.58
CCDC170-201ENST00000239374 MTMR2Q13614 643 aa11.43□□□□□ -0.58
CCDC170-201ENST00000239374 MTHFD1LQ6UB35 978 aa11.43□□□□□ -0.58
CCDC170-201ENST00000239374 ALYREFQ86V81 257 aaKnown RBP11.43□□□□□ -0.58
CCDC170-201ENST00000239374 GFM2Q969S9 779 aaKnown RBP11.43□□□□□ -0.58
CCDC170-201ENST00000239374 MTFR1LQ9H019 292 aa11.43□□□□□ -0.58
CCDC170-201ENST00000239374 NLRP11P59045 1033 aaKnown RBP11.43□□□□□ -0.58
CCDC170-201ENST00000239374 PDPK2PQ6A1A2 396 aa11.43□□□□□ -0.58
CCDC170-201ENST00000239374 MAP4K3Q8IVH8 894 aa11.43□□□□□ -0.58
CCDC170-201ENST00000239374 ASAP3Q8TDY4 903 aa11.43□□□□□ -0.58
CCDC170-201ENST00000239374 GCNAQ96QF7 691 aa11.43□□□□□ -0.58
CCDC170-201ENST00000239374 TMEM39BQ9GZU3 492 aa11.43□□□□□ -0.58
CCDC170-201ENST00000239374 RALBP11234 206 aa11.43□□□□□ -0.58
CCDC170-201ENST00000239374 BOLA3Q53S33 107 aa11.43□□□□□ -0.58
CCDC170-201ENST00000239374 LAYNQ6UX15 382 aa11.43□□□□□ -0.58
CCDC170-201ENST00000239374 ZNF669Q96BR6 464 aaPredicted RBP11.43□□□□□ -0.58
CCDC170-201ENST00000239374 CGRRF1Q99675 332 aa11.43□□□□□ -0.58
CCDC170-201ENST00000239374 ZNF518BQ9C0D4 1074 aa11.43□□□□□ -0.58
CCDC170-201ENST00000239374 FAM49BQ9NUQ9 324 aa11.43□□□□□ -0.58
CCDC170-201ENST00000239374 TMX2Q9Y320 296 aa11.43□□□□□ -0.58
CCDC170-201ENST00000239374 RPL22P35268 128 aaKnown RBP11.43□□□□□ -0.58
CCDC170-201ENST00000239374 GTF2BQ00403 316 aa11.43□□□□□ -0.58
CCDC170-201ENST00000239374 KCTD2Q14681 263 aa11.43□□□□□ -0.58
CCDC170-201ENST00000239374 SLC15A2Q16348 729 aa11.43□□□□□ -0.58
CCDC170-201ENST00000239374 SHROOM1Q2M3G4 852 aaPredicted RBP11.43□□□□□ -0.58
CCDC170-201ENST00000239374 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.43□□□□□ -0.58
CCDC170-201ENST00000239374 L3MBTL3Q96JM7 780 aaPredicted RBP11.43□□□□□ -0.58
CCDC170-201ENST00000239374 TRIM15Q9C019 465 aa11.43□□□□□ -0.58
CCDC170-201ENST00000239374 ACSS3Q9H6R3 686 aa11.43□□□□□ -0.58
CCDC170-201ENST00000239374 ACAD9Q9H845 621 aa11.43□□□□□ -0.58
CCDC170-201ENST00000239374 THAP1Q9NVV9 213 aa11.43□□□□□ -0.58
CCDC170-201ENST00000239374 CLIC5Q9NZA1 410 aa11.43□□□□□ -0.58
CCDC170-201ENST00000239374 NKX1-2Q9UD57 310 aaPredicted RBP11.43□□□□□ -0.58
CCDC170-201ENST00000239374 LSM8O95777 96 aaKnown RBP11.42□□□□□ -0.58
CCDC170-201ENST00000239374 POLBP06746 335 aa11.42□□□□□ -0.58
CCDC170-201ENST00000239374 USP10Q14694 798 aaKnown RBP11.42□□□□□ -0.58
CCDC170-201ENST00000239374 N4BP2L1Q5TBK1 243 aaPredicted RBP11.42□□□□□ -0.58
CCDC170-201ENST00000239374 RWDD4Q6NW29 188 aaKnown RBP11.42□□□□□ -0.58
CCDC170-201ENST00000239374 MMADHCQ9H3L0 296 aaPredicted RBP11.42□□□□□ -0.58
CCDC170-201ENST00000239374 LGALS13Q9UHV8 139 aa11.42□□□□□ -0.58
CCDC170-201ENST00000239374 IPO11Q9UI26 975 aaKnown RBP11.42□□□□□ -0.58
CCDC170-201ENST00000239374 RPS6KL1Q9Y6S9 549 aa11.42□□□□□ -0.58
CCDC170-201ENST00000239374 MYH6P13533 1939 aa11.42□□□□□ -0.58
CCDC170-201ENST00000239374 ABLIM1O14639 778 aa11.42□□□□□ -0.58
CCDC170-201ENST00000239374 PGM3O95394 542 aa11.42□□□□□ -0.58
CCDC170-201ENST00000239374 CLK2P49760 499 aaKnown RBP11.42□□□□□ -0.58
CCDC170-201ENST00000239374 RNF148Q8N7C7 305 aa11.42□□□□□ -0.58
CCDC170-201ENST00000239374 MKL1Q969V6 931 aa11.42□□□□□ -0.58
CCDC170-201ENST00000239374 ZBTB45Q96K62 511 aaPredicted RBP11.42□□□□□ -0.58
CCDC170-201ENST00000239374 KCNQ5Q9NR82 932 aa11.42□□□□□ -0.58
CCDC170-201ENST00000239374 DRG1Q9Y295 367 aaKnown RBP11.42□□□□□ -0.58
CCDC170-201ENST00000239374 EME2A4GXA9 379 aaPredicted RBP11.42□□□□□ -0.58
CCDC170-201ENST00000239374 PRPF4O43172 522 aaKnown RBP eCLIP11.42□□□□□ -0.58
CCDC170-201ENST00000239374 DPYSL3Q14195 570 aa11.42□□□□□ -0.58
CCDC170-201ENST00000239374 DENND5BQ6ZUT9 1274 aa11.42□□□□□ -0.58
CCDC170-201ENST00000239374 LRRC71Q8N4P6 559 aa11.42□□□□□ -0.58
CCDC170-201ENST00000239374 C12orf50Q8NA57 414 aaPredicted RBP11.42□□□□□ -0.58
CCDC170-201ENST00000239374 FAM151AQ8WW52 585 aa11.42□□□□□ -0.58
CCDC170-201ENST00000239374 NMUR2Q9GZQ4 415 aa11.42□□□□□ -0.58
CCDC170-201ENST00000239374 ILKAPQ9H0C8 392 aaPredicted RBP11.42□□□□□ -0.58
CCDC170-201ENST00000239374 ZNF70Q9UC06 446 aaPredicted RBP11.42□□□□□ -0.58
CCDC170-201ENST00000239374 TOPAZ1Q8N9V7 1692 aa11.42□□□□□ -0.58
CCDC170-201ENST00000239374 FAM200BP0CF97 657 aa11.42□□□□□ -0.58
CCDC170-201ENST00000239374 THRAP10827 490 aa11.42□□□□□ -0.58
CCDC170-201ENST00000239374 TNFAIP2Q03169 654 aa11.42□□□□□ -0.58
CCDC170-201ENST00000239374 ITGA9Q13797 1035 aa11.42□□□□□ -0.58
CCDC170-201ENST00000239374 OASLQ15646 514 aaKnown RBP11.42□□□□□ -0.58
CCDC170-201ENST00000239374 HABP4Q5JVS0 413 aaKnown RBP11.42□□□□□ -0.58
CCDC170-201ENST00000239374 C16orf46Q6P387 395 aa11.42□□□□□ -0.58
CCDC170-201ENST00000239374 DSTYKQ6XUX3 929 aa11.42□□□□□ -0.58
CCDC170-201ENST00000239374 SEPT12Q8IYM1 358 aa11.42□□□□□ -0.58
CCDC170-201ENST00000239374 PBXIP1Q96AQ6 731 aa11.42□□□□□ -0.58
CCDC170-201ENST00000239374 ASCC2Q9H1I8 757 aaPredicted RBP11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms