RNA–Protein interactions for RNA: ENST00000233468.4

SF3B6-201, Transcript of splicing factor 3b subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B6, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-201ENST00000233468 HCFC1R1Q9NWW0 138 aa11.95□□□□□ -0.5
SF3B6-201ENST00000233468 HESX1Q9UBX0 185 aa11.95□□□□□ -0.5
SF3B6-201ENST00000233468 LIMA1Q9UHB6 759 aaKnown RBP11.95□□□□□ -0.5
SF3B6-201ENST00000233468 MAGED2Q9UNF1 606 aaPredicted RBP11.95□□□□□ -0.5
SF3B6-201ENST00000233468 ANK1P16157 1881 aa11.94□□□□□ -0.5
SF3B6-201ENST00000233468 PRR23AA6NEV1 266 aa11.94□□□□□ -0.5
SF3B6-201ENST00000233468 LRRC10BA6NIK2 292 aa11.94□□□□□ -0.5
SF3B6-201ENST00000233468 PROB1E7EW31 1015 aa11.94□□□□□ -0.5
SF3B6-201ENST00000233468 F8VP50 259 aa11.94□□□□□ -0.5
SF3B6-201ENST00000233468 GOLGA6L19H0YKK7 550 aa11.94□□□□□ -0.5
SF3B6-201ENST00000233468 VDRP11473 427 aa11.94□□□□□ -0.5
SF3B6-201ENST00000233468 KRT5P13647 590 aa11.94□□□□□ -0.5
SF3B6-201ENST00000233468 CD19P15391 556 aa11.94□□□□□ -0.5
SF3B6-201ENST00000233468 PON1P27169 355 aa11.94□□□□□ -0.5
SF3B6-201ENST00000233468 GABRR2P28476 465 aa11.94□□□□□ -0.5
SF3B6-201ENST00000233468 NBL1P41271 181 aa11.94□□□□□ -0.5
SF3B6-201ENST00000233468 RAD23BP54727 409 aa11.94□□□□□ -0.5
SF3B6-201ENST00000233468 NTHL1P78549 312 aa11.94□□□□□ -0.5
SF3B6-201ENST00000233468 KRT31Q15323 416 aa11.94□□□□□ -0.5
SF3B6-201ENST00000233468 SGO2Q562F6 1265 aa11.94□□□□□ -0.5
SF3B6-201ENST00000233468 MIIPQ5JXC2 388 aa11.94□□□□□ -0.5
SF3B6-201ENST00000233468 PRSS36Q5K4E3 855 aa11.94□□□□□ -0.5
SF3B6-201ENST00000233468 DMRTA1Q5VZB9 504 aa11.94□□□□□ -0.5
SF3B6-201ENST00000233468 ARHGAP17Q68EM7 881 aa11.94□□□□□ -0.5
SF3B6-201ENST00000233468 RRAGAQ7L523 313 aa11.94□□□□□ -0.5
SF3B6-201ENST00000233468 FUKQ8N0W3 1084 aa11.94□□□□□ -0.5
SF3B6-201ENST00000233468 NUP93Q8N1F7 819 aa11.94□□□□□ -0.5
SF3B6-201ENST00000233468 C12orf29Q8N999 325 aa11.94□□□□□ -0.5
SF3B6-201ENST00000233468 PDZD8Q8NEN9 1154 aa11.94□□□□□ -0.5
SF3B6-201ENST00000233468 ITFG1Q8TB96 612 aa11.94□□□□□ -0.5
SF3B6-201ENST00000233468 WHAMMQ8TF30 809 aa11.94□□□□□ -0.5
SF3B6-201ENST00000233468 MRPS31Q92665 395 aaKnown RBP11.94□□□□□ -0.5
SF3B6-201ENST00000233468 SLITRK1Q96PX8 696 aa11.94□□□□□ -0.5
SF3B6-201ENST00000233468 ARID3AQ99856 593 aa11.94□□□□□ -0.5
SF3B6-201ENST00000233468 FUCA2Q9BTY2 467 aa11.94□□□□□ -0.5
SF3B6-201ENST00000233468 VPS16Q9H269 839 aa11.94□□□□□ -0.5
SF3B6-201ENST00000233468 FBXO44Q9H4M3 255 aa11.94□□□□□ -0.5
SF3B6-201ENST00000233468 PNPLA8Q9NP80 782 aa11.94□□□□□ -0.5
SF3B6-201ENST00000233468 KRT82Q9NSB4 513 aa11.94□□□□□ -0.5
SF3B6-201ENST00000233468 FAM49BQ9NUQ9 324 aa11.94□□□□□ -0.5
SF3B6-201ENST00000233468 TAB2Q9NYJ8 693 aa11.94□□□□□ -0.5
SF3B6-201ENST00000233468 HMGXB4Q9UGU5 601 aa11.94□□□□□ -0.5
SF3B6-201ENST00000233468 NME7Q9Y5B8 376 aa11.94□□□□□ -0.5
SF3B6-201ENST00000233468 SCN1AP35498 2009 aa11.93□□□□□ -0.5
SF3B6-201ENST00000233468 A0A1W2PRU2 124 aa11.93□□□□□ -0.5
SF3B6-201ENST00000233468 CLDN5O00501 218 aa11.93□□□□□ -0.5
SF3B6-201ENST00000233468 MED7O43513 233 aa11.93□□□□□ -0.5
SF3B6-201ENST00000233468 CCDC130P13994 396 aa11.93□□□□□ -0.5
SF3B6-201ENST00000233468 ZNF18P17022 549 aa11.93□□□□□ -0.5
SF3B6-201ENST00000233468 PFKLP17858 780 aa11.93□□□□□ -0.5
SF3B6-201ENST00000233468 SLC9A1P19634 815 aa11.93□□□□□ -0.5
SF3B6-201ENST00000233468 ADORA2BP29275 332 aa11.93□□□□□ -0.5
SF3B6-201ENST00000233468 GPR15P49685 360 aa11.93□□□□□ -0.5
SF3B6-201ENST00000233468 CDR1P51861 262 aa11.93□□□□□ -0.5
SF3B6-201ENST00000233468 COPB1P53618 953 aaKnown RBP11.93□□□□□ -0.5
SF3B6-201ENST00000233468 BPIFB4P59827 614 aa11.93□□□□□ -0.5
SF3B6-201ENST00000233468 ORC1Q13415 861 aa11.93□□□□□ -0.5
SF3B6-201ENST00000233468 TDGQ13569 410 aa11.93□□□□□ -0.5
SF3B6-201ENST00000233468 NCAPHQ15003 741 aa11.93□□□□□ -0.5
SF3B6-201ENST00000233468 PHLDB3Q6NSJ2 640 aa11.93□□□□□ -0.5
SF3B6-201ENST00000233468 TMC8Q8IU68 726 aa11.93□□□□□ -0.5
SF3B6-201ENST00000233468 NPAS3Q8IXF0 933 aa11.93□□□□□ -0.5
SF3B6-201ENST00000233468 SIX5Q8N196 739 aa11.93□□□□□ -0.5
SF3B6-201ENST00000233468 SLC4A11Q8NBS3 891 aa11.93□□□□□ -0.5
SF3B6-201ENST00000233468 KCNV2Q8TDN2 545 aa11.93□□□□□ -0.5
SF3B6-201ENST00000233468 OVCA2Q8WZ82 227 aa11.93□□□□□ -0.5
SF3B6-201ENST00000233468 MCRS1Q96EZ8 462 aa11.93□□□□□ -0.5
SF3B6-201ENST00000233468 PCMTD1Q96MG8 357 aaPredicted RBP11.93□□□□□ -0.5
SF3B6-201ENST00000233468 TWNKQ96RR1 684 aa11.93□□□□□ -0.5
SF3B6-201ENST00000233468 MYADMQ96S97 322 aa11.93□□□□□ -0.5
SF3B6-201ENST00000233468 DUSP16Q9BY84 665 aa11.93□□□□□ -0.5
SF3B6-201ENST00000233468 UBXN6Q9BZV1 441 aa11.93□□□□□ -0.5
SF3B6-201ENST00000233468 IRF2BPLQ9H1B7 796 aa11.93□□□□□ -0.5
SF3B6-201ENST00000233468 CSNK1G1Q9HCP0 422 aa11.93□□□□□ -0.5
SF3B6-201ENST00000233468 TRPM5Q9NZQ8 1165 aa11.93□□□□□ -0.5
SF3B6-201ENST00000233468 VWA8A3KMH1 1905 aa11.93□□□□□ -0.5
SF3B6-201ENST00000233468 CACNA1IQ9P0X4 2223 aa11.92□□□□□ -0.5
SF3B6-201ENST00000233468 GVINP1Q7Z2Y8 2422 aa11.92□□□□□ -0.5
SF3B6-201ENST00000233468 COL4A3Q01955 1670 aa11.92□□□□□ -0.5
SF3B6-201ENST00000233468 KRBA1A5PL33 1030 aa11.92□□□□□ -0.5
SF3B6-201ENST00000233468 LGALS16A8MUM7 142 aa11.92□□□□□ -0.5
SF3B6-201ENST00000233468 CFHP08603 1231 aa11.92□□□□□ -0.5
SF3B6-201ENST00000233468 HMGA1P17096 107 aaKnown RBP11.92□□□□□ -0.5
SF3B6-201ENST00000233468 CEBPBP17676 345 aa11.92□□□□□ -0.5
SF3B6-201ENST00000233468 ACO1P21399 889 aaKnown RBP11.92□□□□□ -0.5
SF3B6-201ENST00000233468 YWHAQP27348 245 aa11.92□□□□□ -0.5
SF3B6-201ENST00000233468 CLCN5P51795 746 aa11.92□□□□□ -0.5
SF3B6-201ENST00000233468 BCAT1P54687 386 aa11.92□□□□□ -0.5
SF3B6-201ENST00000233468 MAP3K7CLP57077 242 aa11.92□□□□□ -0.5
SF3B6-201ENST00000233468 UBXN1Q04323 297 aa11.92□□□□□ -0.5
SF3B6-201ENST00000233468 TEAD2Q15562 447 aa11.92□□□□□ -0.5
SF3B6-201ENST00000233468 CCDC142Q17RM4 750 aa11.92□□□□□ -0.5
SF3B6-201ENST00000233468 SLC5A9Q2M3M2 681 aa11.92□□□□□ -0.5
SF3B6-201ENST00000233468 PPP1R26Q5T8A7 1209 aaPredicted RBP11.92□□□□□ -0.5
SF3B6-201ENST00000233468 SDHAF4Q5VUM1 108 aa11.92□□□□□ -0.5
SF3B6-201ENST00000233468 PAQR9Q6ZVX9 377 aa11.92□□□□□ -0.5
SF3B6-201ENST00000233468 ARHGEF19Q8IW93 802 aa11.92□□□□□ -0.5
SF3B6-201ENST00000233468 DHX40Q8IX18 779 aaKnown RBP11.92□□□□□ -0.5
SF3B6-201ENST00000233468 UBR7Q8N806 425 aa11.92□□□□□ -0.5
SF3B6-201ENST00000233468 ANKRD52Q8NB46 1076 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms