RNA–Protein interactions for RNA: ENST00000229829.6

HLA-DOA-201, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DOA, Length 3,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-201ENST00000229829 PRPF4O43172 522 aaKnown RBP eCLIP9.83□□□□□ -0.84
HLA-DOA-201ENST00000229829 WEE2P0C1S8 567 aa9.83□□□□□ -0.84
HLA-DOA-201ENST00000229829 ADRA1DP25100 572 aa9.83□□□□□ -0.84
HLA-DOA-201ENST00000229829 CETN2P41208 172 aa9.83□□□□□ -0.84
HLA-DOA-201ENST00000229829 MAGEA8P43361 318 aa9.83□□□□□ -0.84
HLA-DOA-201ENST00000229829 EN1Q05925 392 aaPredicted RBP9.83□□□□□ -0.84
HLA-DOA-201ENST00000229829 PDK4Q16654 411 aa9.83□□□□□ -0.84
HLA-DOA-201ENST00000229829 SNRNP48Q6IEG0 339 aaKnown RBP9.83□□□□□ -0.84
HLA-DOA-201ENST00000229829 ZNF333Q96JL9 665 aa9.83□□□□□ -0.84
HLA-DOA-201ENST00000229829 TUBGCP5Q96RT8 1024 aa9.83□□□□□ -0.84
HLA-DOA-201ENST00000229829 PCDHGA4Q9Y5G9 962 aa9.83□□□□□ -0.84
HLA-DOA-201ENST00000229829 TCRBV5S1A1TA0A578 114 aa9.82□□□□□ -0.84
HLA-DOA-201ENST00000229829 PEX10O60683 326 aa9.82□□□□□ -0.84
HLA-DOA-201ENST00000229829 OR6B1O95007 311 aa9.82□□□□□ -0.84
HLA-DOA-201ENST00000229829 FAM163BP0C2L3 166 aa9.82□□□□□ -0.84
HLA-DOA-201ENST00000229829 POTEJP0CG39 1038 aa9.82□□□□□ -0.84
HLA-DOA-201ENST00000229829 ATP6V1B1P15313 513 aa9.82□□□□□ -0.84
HLA-DOA-201ENST00000229829 CDKN2BP42772 138 aa9.82□□□□□ -0.84
HLA-DOA-201ENST00000229829 VCPP55072 806 aaKnown RBP9.82□□□□□ -0.84
HLA-DOA-201ENST00000229829 CCDC15Q0P6D6 951 aa9.82□□□□□ -0.84
HLA-DOA-201ENST00000229829 FKBP1CQ5VVH2 108 aa9.82□□□□□ -0.84
HLA-DOA-201ENST00000229829 TRIM72Q6ZMU5 477 aa9.82□□□□□ -0.84
HLA-DOA-201ENST00000229829 ZBTB33Q86T24 672 aa9.82□□□□□ -0.84
HLA-DOA-201ENST00000229829 C10orf82Q8WW14 230 aa9.82□□□□□ -0.84
HLA-DOA-201ENST00000229829 TFAP2BQ92481 460 aa9.82□□□□□ -0.84
HLA-DOA-201ENST00000229829 GPRASP2Q96D09 838 aa9.82□□□□□ -0.84
HLA-DOA-201ENST00000229829 TEPSINQ96N21 525 aa9.82□□□□□ -0.84
HLA-DOA-201ENST00000229829 ARHGEF38Q9NXL2 777 aa9.82□□□□□ -0.84
HLA-DOA-201ENST00000229829 MAP3K20Q9NYL2 800 aaKnown RBP9.82□□□□□ -0.84
HLA-DOA-201ENST00000229829 PAIP2BQ9ULR5 123 aaKnown RBP9.82□□□□□ -0.84
HLA-DOA-201ENST00000229829 STYXL1Q9Y6J8 313 aa9.82□□□□□ -0.84
HLA-DOA-201ENST00000229829 RBM47A0AV96 593 aaKnown RBP9.82□□□□□ -0.84
HLA-DOA-201ENST00000229829 GSTA2P09210 222 aa9.82□□□□□ -0.84
HLA-DOA-201ENST00000229829 CD48P09326 243 aa9.82□□□□□ -0.84
HLA-DOA-201ENST00000229829 HIRAP54198 1017 aaPredicted RBP9.82□□□□□ -0.84
HLA-DOA-201ENST00000229829 CXCL9Q07325 125 aa9.82□□□□□ -0.84
HLA-DOA-201ENST00000229829 SCARA5Q6ZMJ2 495 aa9.82□□□□□ -0.84
HLA-DOA-201ENST00000229829 TDRPQ86YL5 185 aa9.82□□□□□ -0.84
HLA-DOA-201ENST00000229829 KIAA0319LQ8IZA0 1049 aa9.82□□□□□ -0.84
HLA-DOA-201ENST00000229829 ST13P4Q8IZP2 240 aaPredicted RBP9.82□□□□□ -0.84
HLA-DOA-201ENST00000229829 ZNF75CPQ92670 426 aaPredicted RBP9.82□□□□□ -0.84
HLA-DOA-201ENST00000229829 SIKE1Q9BRV8 207 aa9.82□□□□□ -0.84
HLA-DOA-201ENST00000229829 RABGEF1Q9UJ41 708 aa9.82□□□□□ -0.84
HLA-DOA-201ENST00000229829 CNTN6Q9UQ52 1028 aa9.82□□□□□ -0.84
HLA-DOA-201ENST00000229829 NFASCO94856 1347 aa9.82□□□□□ -0.84
HLA-DOA-201ENST00000229829 IL1R2P27930 398 aa9.81□□□□□ -0.84
HLA-DOA-201ENST00000229829 RFC1P35251 1148 aaPredicted RBP9.81□□□□□ -0.84
HLA-DOA-201ENST00000229829 SKIV2L2P42285 1042 aaKnown RBP9.81□□□□□ -0.84
HLA-DOA-201ENST00000229829 INHBCP55103 352 aa9.81□□□□□ -0.84
HLA-DOA-201ENST00000229829 MYL6P60660 151 aa9.81□□□□□ -0.84
HLA-DOA-201ENST00000229829 LMNB2Q03252 620 aa9.81□□□□□ -0.84
HLA-DOA-201ENST00000229829 CBX3Q13185 183 aa9.81□□□□□ -0.84
HLA-DOA-201ENST00000229829 MORF4L2Q15014 288 aa9.81□□□□□ -0.84
HLA-DOA-201ENST00000229829 TFDP3Q5H9I0 405 aa9.81□□□□□ -0.84
HLA-DOA-201ENST00000229829 GPAT2Q6NUI2 795 aa9.81□□□□□ -0.84
HLA-DOA-201ENST00000229829 DNAJC24Q6P3W2 148 aa9.81□□□□□ -0.84
HLA-DOA-201ENST00000229829 ARFGAP1Q8N6T3 406 aa9.81□□□□□ -0.84
HLA-DOA-201ENST00000229829 RDM1Q8NG50 284 aa9.81□□□□□ -0.84
HLA-DOA-201ENST00000229829 ACTL9Q8TC94 416 aa9.81□□□□□ -0.84
HLA-DOA-201ENST00000229829 TRAPPC9Q96Q05 1148 aa9.81□□□□□ -0.84
HLA-DOA-201ENST00000229829 MTMR12Q9C0I1 747 aa9.81□□□□□ -0.84
HLA-DOA-201ENST00000229829 LRMDAQ9H2I8 198 aa9.81□□□□□ -0.84
HLA-DOA-201ENST00000229829 SLC17A7Q9P2U7 560 aa9.81□□□□□ -0.84
HLA-DOA-201ENST00000229829 A0A0B4J269 797 aa9.81□□□□□ -0.84
HLA-DOA-201ENST00000229829 TBX10O75333 385 aa9.81□□□□□ -0.84
HLA-DOA-201ENST00000229829 TMCC1O94876 653 aa9.81□□□□□ -0.84
HLA-DOA-201ENST00000229829 LYNP07948 512 aa9.81□□□□□ -0.84
HLA-DOA-201ENST00000229829 ZNF132P52740 706 aa9.81□□□□□ -0.84
HLA-DOA-201ENST00000229829 OTUD4Q01804 1114 aaKnown RBP9.81□□□□□ -0.84
HLA-DOA-201ENST00000229829 PRAMEF18Q5VWM3 479 aa9.81□□□□□ -0.84
HLA-DOA-201ENST00000229829 CENPUQ71F23 418 aa9.81□□□□□ -0.84
HLA-DOA-201ENST00000229829 RBM12BQ8IXT5 1001 aaKnown RBP9.81□□□□□ -0.84
HLA-DOA-201ENST00000229829 RFWD2Q8NHY2 731 aa9.81□□□□□ -0.84
HLA-DOA-201ENST00000229829 JOSD2Q8TAC2 188 aa9.81□□□□□ -0.84
HLA-DOA-201ENST00000229829 DEPTORQ8TB45 409 aa9.81□□□□□ -0.84
HLA-DOA-201ENST00000229829 PIP4K2CQ8TBX8 421 aa9.81□□□□□ -0.84
HLA-DOA-201ENST00000229829 CPT1BQ92523 772 aa9.81□□□□□ -0.84
HLA-DOA-201ENST00000229829 PTPRN2Q92932 1015 aa9.81□□□□□ -0.84
HLA-DOA-201ENST00000229829 CGRRF1Q99675 332 aa9.81□□□□□ -0.84
HLA-DOA-201ENST00000229829 KANSL3Q9P2N6 904 aa9.81□□□□□ -0.84
HLA-DOA-201ENST00000229829 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.81□□□□□ -0.84
HLA-DOA-201ENST00000229829 ORC1Q13415 861 aa9.81□□□□□ -0.84
HLA-DOA-201ENST00000229829 TAF5Q15542 800 aa9.81□□□□□ -0.84
HLA-DOA-201ENST00000229829 HIF1AQ16665 826 aa9.81□□□□□ -0.84
HLA-DOA-201ENST00000229829 SGSM1Q2NKQ1 1148 aa9.81□□□□□ -0.84
HLA-DOA-201ENST00000229829 SLC44A4Q53GD3 710 aa9.81□□□□□ -0.84
HLA-DOA-201ENST00000229829 SH2D4BQ5SQS7 431 aa9.81□□□□□ -0.84
HLA-DOA-201ENST00000229829 DRICH1Q6PGQ1 229 aaPredicted RBP9.81□□□□□ -0.84
HLA-DOA-201ENST00000229829 C3orf62Q6ZUJ4 267 aa9.81□□□□□ -0.84
HLA-DOA-201ENST00000229829 RHPN2Q8IUC4 686 aa9.81□□□□□ -0.84
HLA-DOA-201ENST00000229829 ZNF276Q8N554 614 aa9.81□□□□□ -0.84
HLA-DOA-201ENST00000229829 EMC1Q8N766 993 aa9.81□□□□□ -0.84
HLA-DOA-201ENST00000229829 TCP10LQ8TDR4 215 aa9.81□□□□□ -0.84
HLA-DOA-201ENST00000229829 ZNF668Q96K58 619 aaPredicted RBP9.81□□□□□ -0.84
HLA-DOA-201ENST00000229829 TTC25Q96NG3 672 aa9.81□□□□□ -0.84
HLA-DOA-201ENST00000229829 PDP2Q9P2J9 529 aa9.81□□□□□ -0.84
HLA-DOA-201ENST00000229829 ZNRF3Q9ULT6 936 aa9.81□□□□□ -0.84
HLA-DOA-201ENST00000229829 DRG1Q9Y295 367 aaKnown RBP9.81□□□□□ -0.84
HLA-DOA-201ENST00000229829 FARP1Q9Y4F1 1045 aaPredicted RBP9.81□□□□□ -0.84
HLA-DOA-201ENST00000229829 ARHGAP42A6NI28 874 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms