RNA–Protein interactions for RNA: ENST00000219334.9

SMPD3-201, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD3, Length 5,453 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-201ENST00000219334 TKTL1P51854 596 aa19.62■□□□□ 0.73
SMPD3-201ENST00000219334 CCDC85BQ15834 202 aaPredicted RBP19.62■□□□□ 0.73
SMPD3-201ENST00000219334 RETSATQ6NUM9 610 aa19.62■□□□□ 0.73
SMPD3-201ENST00000219334 REPS2Q8NFH8 660 aa19.62■□□□□ 0.73
SMPD3-201ENST00000219334 ADGRE3Q9BY15 652 aa19.62■□□□□ 0.73
SMPD3-201ENST00000219334 NFKBIZQ9BYH8 718 aa19.62■□□□□ 0.73
SMPD3-201ENST00000219334 PCDH8O95206 1070 aa19.62■□□□□ 0.73
SMPD3-201ENST00000219334 SLC13A5Q86YT5 568 aaPredicted RBP19.62■□□□□ 0.73
SMPD3-201ENST00000219334 CLEC4FQ8N1N0 589 aa19.62■□□□□ 0.73
SMPD3-201ENST00000219334 JADE3Q92613 823 aa19.62■□□□□ 0.73
SMPD3-201ENST00000219334 KCTD10Q9H3F6 313 aa19.62■□□□□ 0.73
SMPD3-201ENST00000219334 F8W810 466 aa19.62■□□□□ 0.73
SMPD3-201ENST00000219334 GOLGA8TH3BQL2 631 aa19.62■□□□□ 0.73
SMPD3-201ENST00000219334 CXCL8P10145 99 aa19.62■□□□□ 0.73
SMPD3-201ENST00000219334 MLNP12872 115 aa19.62■□□□□ 0.73
SMPD3-201ENST00000219334 DARSP14868 501 aaKnown RBP19.62■□□□□ 0.73
SMPD3-201ENST00000219334 FGFR2P21802 821 aa19.62■□□□□ 0.73
SMPD3-201ENST00000219334 CTCFP49711 727 aaPredicted RBP19.62■□□□□ 0.73
SMPD3-201ENST00000219334 MYL6P60660 151 aa19.62■□□□□ 0.73
SMPD3-201ENST00000219334 FAXCQ5TGI0 409 aa19.62■□□□□ 0.73
SMPD3-201ENST00000219334 MYO1HQ8N1T3 1032 aa19.62■□□□□ 0.73
SMPD3-201ENST00000219334 SGF29Q96ES7 293 aa19.62■□□□□ 0.73
SMPD3-201ENST00000219334 ZCWPW1Q9H0M4 648 aa19.62■□□□□ 0.73
SMPD3-201ENST00000219334 SPATS2LQ9NUQ6 558 aaKnown RBP19.62■□□□□ 0.73
SMPD3-201ENST00000219334 TRIM10Q9UDY6 481 aa19.62■□□□□ 0.73
SMPD3-201ENST00000219334 AKAP10O43572 662 aa19.62■□□□□ 0.73
SMPD3-201ENST00000219334 RAP1GAPP47736 663 aa19.62■□□□□ 0.73
SMPD3-201ENST00000219334 PTPN11Q06124 597 aaPredicted RBP19.62■□□□□ 0.73
SMPD3-201ENST00000219334 CYP24A1Q07973 514 aa19.62■□□□□ 0.73
SMPD3-201ENST00000219334 PLCL1Q15111 1095 aa19.62■□□□□ 0.73
SMPD3-201ENST00000219334 FAM171A1Q5VUB5 890 aa19.62■□□□□ 0.73
SMPD3-201ENST00000219334 FAM131BQ86XD5 332 aa19.62■□□□□ 0.73
SMPD3-201ENST00000219334 NT5DC4Q86YG4 428 aa19.62■□□□□ 0.73
SMPD3-201ENST00000219334 CDCA5Q96FF9 252 aa19.62■□□□□ 0.73
SMPD3-201ENST00000219334 ADNPQ9H2P0 1102 aa19.62■□□□□ 0.73
SMPD3-201ENST00000219334 WDR41Q9HAD4 459 aa19.62■□□□□ 0.73
SMPD3-201ENST00000219334 GYPCP04921 128 aa19.61■□□□□ 0.73
SMPD3-201ENST00000219334 CYP11B1P15538 503 aa19.61■□□□□ 0.73
SMPD3-201ENST00000219334 CHN1P15882 459 aa19.61■□□□□ 0.73
SMPD3-201ENST00000219334 CNTN1Q12860 1018 aa19.61■□□□□ 0.73
SMPD3-201ENST00000219334 PTPAQ15257 358 aa19.61■□□□□ 0.73
SMPD3-201ENST00000219334 AASDHQ4L235 1098 aaPredicted RBP19.61■□□□□ 0.73
SMPD3-201ENST00000219334 CNPY3Q9BT09 278 aa19.61■□□□□ 0.73
SMPD3-201ENST00000219334 CARD9Q9H257 536 aa19.61■□□□□ 0.73
SMPD3-201ENST00000219334 PDGFCQ9NRA1 345 aa19.61■□□□□ 0.73
SMPD3-201ENST00000219334 RNF112Q9ULX5 631 aa19.61■□□□□ 0.73
SMPD3-201ENST00000219334 GUCY1A3Q02108 690 aa19.61■□□□□ 0.73
SMPD3-201ENST00000219334 TMED1Q13445 227 aa19.61■□□□□ 0.73
SMPD3-201ENST00000219334 LRRC8BQ6P9F7 803 aa19.61■□□□□ 0.73
SMPD3-201ENST00000219334 ZNF720Q7Z2F6 126 aa19.61■□□□□ 0.73
SMPD3-201ENST00000219334 CEP70Q8NHQ1 597 aa19.61■□□□□ 0.73
SMPD3-201ENST00000219334 TADA1Q96BN2 335 aa19.61■□□□□ 0.73
SMPD3-201ENST00000219334 WNK4Q96J92 1243 aa19.61■□□□□ 0.73
SMPD3-201ENST00000219334 CISHQ9NSE2 258 aa19.61■□□□□ 0.73
SMPD3-201ENST00000219334 AP4E1Q9UPM8 1137 aa19.61■□□□□ 0.73
SMPD3-201ENST00000219334 CNTNAP2Q9UHC6 1331 aa19.61■□□□□ 0.73
SMPD3-201ENST00000219334 CPS1P31327 1500 aa19.61■□□□□ 0.73
SMPD3-201ENST00000219334 RAD51CO43502 376 aa19.61■□□□□ 0.73
SMPD3-201ENST00000219334 CSDE1O75534 798 aaKnown RBP19.61■□□□□ 0.73
SMPD3-201ENST00000219334 PREPLQ4J6C6 727 aaPredicted RBP19.61■□□□□ 0.73
SMPD3-201ENST00000219334 TC2NQ8N9U0 490 aa19.61■□□□□ 0.73
SMPD3-201ENST00000219334 USP38Q8NB14 1042 aa19.61■□□□□ 0.73
SMPD3-201ENST00000219334 TNIP2Q8NFZ5 429 aa19.61■□□□□ 0.73
SMPD3-201ENST00000219334 UBE2OQ9C0C9 1292 aaKnown RBP19.61■□□□□ 0.73
SMPD3-201ENST00000219334 RIOX1Q9H6W3 641 aa19.61■□□□□ 0.73
SMPD3-201ENST00000219334 EIF3LQ9Y262 564 aaKnown RBP19.61■□□□□ 0.73
SMPD3-201ENST00000219334 TAF6LQ9Y6J9 622 aa19.61■□□□□ 0.73
SMPD3-201ENST00000219334 PBLDP30039 288 aaPredicted RBP19.61■□□□□ 0.73
SMPD3-201ENST00000219334 ALDH5A1P51649 535 aaPredicted RBP19.61■□□□□ 0.73
SMPD3-201ENST00000219334 INHBEP58166 350 aa19.61■□□□□ 0.73
SMPD3-201ENST00000219334 MTA1Q13330 715 aa19.61■□□□□ 0.73
SMPD3-201ENST00000219334 PTGISQ16647 500 aa19.61■□□□□ 0.73
SMPD3-201ENST00000219334 FSCN1Q16658 493 aaKnown RBP19.61■□□□□ 0.73
SMPD3-201ENST00000219334 SLC27A1Q6PCB7 646 aa19.61■□□□□ 0.73
SMPD3-201ENST00000219334 KCNV2Q8TDN2 545 aa19.61■□□□□ 0.73
SMPD3-201ENST00000219334 CMTM5Q96DZ9 223 aa19.61■□□□□ 0.73
SMPD3-201ENST00000219334 OSGEPL1Q9H4B0 414 aa19.61■□□□□ 0.73
SMPD3-201ENST00000219334 PNMA8BQ9ULN7 279 aaPredicted RBP19.61■□□□□ 0.73
SMPD3-201ENST00000219334 AXLP30530 894 aa19.6■□□□□ 0.73
SMPD3-201ENST00000219334 DENND1BQ6P3S1 775 aa19.6■□□□□ 0.73
SMPD3-201ENST00000219334 ZNF438Q7Z4V0 828 aa19.6■□□□□ 0.73
SMPD3-201ENST00000219334 ZSWIM1Q9BR11 485 aa19.6■□□□□ 0.73
SMPD3-201ENST00000219334 ABCA9Q8IUA7 1624 aa19.6■□□□□ 0.73
SMPD3-201ENST00000219334 GUCA1CO95843 209 aa19.6■□□□□ 0.73
SMPD3-201ENST00000219334 FNTAP49354 379 aa19.6■□□□□ 0.73
SMPD3-201ENST00000219334 PRIM2P49643 509 aa19.6■□□□□ 0.73
SMPD3-201ENST00000219334 PSEN2P49810 448 aa19.6■□□□□ 0.73
SMPD3-201ENST00000219334 ATXN3P54252 364 aaPredicted RBP19.6■□□□□ 0.73
SMPD3-201ENST00000219334 CACHD1Q5VU97 1274 aa19.6■□□□□ 0.73
SMPD3-201ENST00000219334 RAD9BQ6WBX8 426 aa19.6■□□□□ 0.73
SMPD3-201ENST00000219334 SETD3Q86TU7 594 aaPredicted RBP19.6■□□□□ 0.73
SMPD3-201ENST00000219334 KRT78Q8N1N4 520 aa19.6■□□□□ 0.73
SMPD3-201ENST00000219334 E2F7Q96AV8 911 aa19.6■□□□□ 0.73
SMPD3-201ENST00000219334 ATXN3LQ9H3M9 355 aa19.6■□□□□ 0.73
SMPD3-201ENST00000219334 FRMPD1Q5SYB0 1578 aa19.6■□□□□ 0.73
SMPD3-201ENST00000219334 TRPC5OSA6NMA1 111 aa19.6■□□□□ 0.73
SMPD3-201ENST00000219334 LSM8O95777 96 aaKnown RBP19.6■□□□□ 0.73
SMPD3-201ENST00000219334 ACVR2BQ13705 512 aa19.6■□□□□ 0.73
SMPD3-201ENST00000219334 AP1ARQ63HQ0 302 aa19.6■□□□□ 0.73
SMPD3-201ENST00000219334 DRG1Q9Y295 367 aaKnown RBP19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms