RNA–Protein interactions for RNA: ENST00000216106.5

HMGXB4-201, Transcript of HMG-box containing 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGXB4, Length 4,047 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-201ENST00000216106 KBTBD7Q8WVZ9 684 aa8.36□□□□□ -1.07
HMGXB4-201ENST00000216106 USP6NLQ92738 828 aa8.36□□□□□ -1.07
HMGXB4-201ENST00000216106 ARHGEF2Q92974 986 aaKnown RBP8.36□□□□□ -1.07
HMGXB4-201ENST00000216106 XPO6Q96QU8 1125 aaKnown RBP8.36□□□□□ -1.07
HMGXB4-201ENST00000216106 GPATCH2LQ9NWQ4 482 aa8.36□□□□□ -1.07
HMGXB4-201ENST00000216106 IPPQ9Y573 584 aa8.36□□□□□ -1.07
HMGXB4-201ENST00000216106 MYADML2A6NDP7 307 aa8.35□□□□□ -1.07
HMGXB4-201ENST00000216106 KPNA7A9QM74 516 aa8.35□□□□□ -1.07
HMGXB4-201ENST00000216106 TNPO2O14787 897 aaKnown RBP8.35□□□□□ -1.07
HMGXB4-201ENST00000216106 PAPSS1O43252 624 aaPredicted RBP8.35□□□□□ -1.07
HMGXB4-201ENST00000216106 BANF1O75531 89 aa8.35□□□□□ -1.07
HMGXB4-201ENST00000216106 GABBR2O75899 941 aa8.35□□□□□ -1.07
HMGXB4-201ENST00000216106 AXLP30530 894 aa8.35□□□□□ -1.07
HMGXB4-201ENST00000216106 RGS2P41220 211 aa8.35□□□□□ -1.07
HMGXB4-201ENST00000216106 CTCFP49711 727 aaPredicted RBP8.35□□□□□ -1.07
HMGXB4-201ENST00000216106 EIF3EP60228 445 aaKnown RBP8.35□□□□□ -1.07
HMGXB4-201ENST00000216106 GAD2Q05329 585 aa8.35□□□□□ -1.07
HMGXB4-201ENST00000216106 MTM1Q13496 603 aa8.35□□□□□ -1.07
HMGXB4-201ENST00000216106 MORF4L2Q15014 288 aa8.35□□□□□ -1.07
HMGXB4-201ENST00000216106 ERMARDQ5T6L9 678 aa8.35□□□□□ -1.07
HMGXB4-201ENST00000216106 C17orf99Q6UX52 265 aa8.35□□□□□ -1.07
HMGXB4-201ENST00000216106 UNC45BQ8IWX7 931 aa8.35□□□□□ -1.07
HMGXB4-201ENST00000216106 TTC13Q8NBP0 860 aa8.35□□□□□ -1.07
HMGXB4-201ENST00000216106 ARRDC4Q8NCT1 418 aa8.35□□□□□ -1.07
HMGXB4-201ENST00000216106 SPATA18Q8TC71 538 aa8.35□□□□□ -1.07
HMGXB4-201ENST00000216106 ATXN2LQ8WWM7 1075 aaKnown RBP8.35□□□□□ -1.07
HMGXB4-201ENST00000216106 RSAD2Q8WXG1 361 aa8.35□□□□□ -1.07
HMGXB4-201ENST00000216106 INTS9Q9NV88 658 aaKnown RBP8.35□□□□□ -1.07
HMGXB4-201ENST00000216106 MANSC4A6NHS7 340 aaPredicted RBP8.35□□□□□ -1.07
HMGXB4-201ENST00000216106 SRRM3A6NNA2 597 aaPredicted RBP8.35□□□□□ -1.07
HMGXB4-201ENST00000216106 APOC4-APOC2K7ER74 178 aa8.35□□□□□ -1.07
HMGXB4-201ENST00000216106 PIRO00625 290 aa8.35□□□□□ -1.07
HMGXB4-201ENST00000216106 APOC2P02655 101 aa8.35□□□□□ -1.07
HMGXB4-201ENST00000216106 PURAQ00577 322 aaKnown RBP8.35□□□□□ -1.07
HMGXB4-201ENST00000216106 DPYSL3Q14195 570 aa8.35□□□□□ -1.07
HMGXB4-201ENST00000216106 TWF2Q6IBS0 349 aaKnown RBP8.35□□□□□ -1.07
HMGXB4-201ENST00000216106 ZC3H18Q86VM9 953 aaKnown RBP8.35□□□□□ -1.07
HMGXB4-201ENST00000216106 RELL1Q8IUW5 271 aa8.35□□□□□ -1.07
HMGXB4-201ENST00000216106 C10orf67Q8IYJ2 551 aa8.35□□□□□ -1.07
HMGXB4-201ENST00000216106 ZBED8Q8IZ13 594 aa8.35□□□□□ -1.07
HMGXB4-201ENST00000216106 FAM172AQ8WUF8 416 aa8.35□□□□□ -1.07
HMGXB4-201ENST00000216106 APBA2Q99767 749 aa8.35□□□□□ -1.07
HMGXB4-201ENST00000216106 MAK16Q9BXY0 300 aaKnown RBP8.35□□□□□ -1.07
HMGXB4-201ENST00000216106 SLC4A5Q9BY07 1137 aa8.35□□□□□ -1.07
HMGXB4-201ENST00000216106 RSAD1Q9HA92 442 aa8.35□□□□□ -1.07
HMGXB4-201ENST00000216106 MCF2LO15068 1137 aa8.35□□□□□ -1.07
HMGXB4-201ENST00000216106 C6orf222P0C671 652 aaPredicted RBP8.35□□□□□ -1.07
HMGXB4-201ENST00000216106 RBP3P10745 1247 aa8.35□□□□□ -1.07
HMGXB4-201ENST00000216106 TFE3P19532 575 aaPredicted RBP8.35□□□□□ -1.07
HMGXB4-201ENST00000216106 SDC4P31431 198 aa8.35□□□□□ -1.07
HMGXB4-201ENST00000216106 IFNAR2P48551 515 aa8.35□□□□□ -1.07
HMGXB4-201ENST00000216106 SLC6A3Q01959 620 aa8.35□□□□□ -1.07
HMGXB4-201ENST00000216106 IRF5Q13568 498 aa8.35□□□□□ -1.07
HMGXB4-201ENST00000216106 CCDC142Q17RM4 750 aa8.35□□□□□ -1.07
HMGXB4-201ENST00000216106 ZC3H12AQ5D1E8 599 aaKnown RBP8.35□□□□□ -1.07
HMGXB4-201ENST00000216106 ANKRD22Q5VYY1 191 aa8.35□□□□□ -1.07
HMGXB4-201ENST00000216106 UNC93AQ86WB7 457 aa8.35□□□□□ -1.07
HMGXB4-201ENST00000216106 CYP4X1Q8N118 509 aa8.35□□□□□ -1.07
HMGXB4-201ENST00000216106 FAM71DQ8N9W8 422 aa8.35□□□□□ -1.07
HMGXB4-201ENST00000216106 MGARPQ8TDB4 240 aa8.35□□□□□ -1.07
HMGXB4-201ENST00000216106 PRCCQ92733 491 aaPredicted RBP8.35□□□□□ -1.07
HMGXB4-201ENST00000216106 KHSRPQ92945 711 aaKnown RBP eCLIP8.35□□□□□ -1.07
HMGXB4-201ENST00000216106 ZNF560Q96MR9 790 aa8.35□□□□□ -1.07
HMGXB4-201ENST00000216106 PRMT1Q99873 361 aaKnown RBP8.35□□□□□ -1.07
HMGXB4-201ENST00000216106 KATNAL1Q9BW62 490 aa8.35□□□□□ -1.07
HMGXB4-201ENST00000216106 MAP3K6O95382 1288 aa8.34□□□□□ -1.07
HMGXB4-201ENST00000216106 CD4P01730 458 aa8.34□□□□□ -1.07
HMGXB4-201ENST00000216106 GNL1P36915 607 aaPredicted RBP8.34□□□□□ -1.07
HMGXB4-201ENST00000216106 CRYBB1P53674 252 aaPredicted RBP8.34□□□□□ -1.07
HMGXB4-201ENST00000216106 ADCY1Q08828 1119 aa8.34□□□□□ -1.07
HMGXB4-201ENST00000216106 KRT81Q14533 505 aa8.34□□□□□ -1.07
HMGXB4-201ENST00000216106 TMEM110Q86TL2 294 aa8.34□□□□□ -1.07
HMGXB4-201ENST00000216106 IFNL1Q8IU54 200 aa8.34□□□□□ -1.07
HMGXB4-201ENST00000216106 SMG8Q8ND04 991 aaKnown RBP8.34□□□□□ -1.07
HMGXB4-201ENST00000216106 ZFP42Q96MM3 310 aa8.34□□□□□ -1.07
HMGXB4-201ENST00000216106 FOXP3Q9BZS1 431 aa8.34□□□□□ -1.07
HMGXB4-201ENST00000216106 CACNG4Q9UBN1 327 aa8.34□□□□□ -1.07
HMGXB4-201ENST00000216106 SHOC2Q9UQ13 582 aa8.34□□□□□ -1.07
HMGXB4-201ENST00000216106 LCP1P13796 627 aa8.34□□□□□ -1.07
HMGXB4-201ENST00000216106 RPL22P35268 128 aaKnown RBP8.34□□□□□ -1.07
HMGXB4-201ENST00000216106 PDIA2Q13087 525 aaKnown RBP8.34□□□□□ -1.07
HMGXB4-201ENST00000216106 LRRC14Q15048 493 aa8.34□□□□□ -1.07
HMGXB4-201ENST00000216106 C1orf228Q6PIY5 440 aa8.34□□□□□ -1.07
HMGXB4-201ENST00000216106 FAM228AQ86W67 206 aa8.34□□□□□ -1.07
HMGXB4-201ENST00000216106 ANKMY2Q8IV38 441 aa8.34□□□□□ -1.07
HMGXB4-201ENST00000216106 APPL2Q8NEU8 664 aa8.34□□□□□ -1.07
HMGXB4-201ENST00000216106 SLC2A14Q8TDB8 520 aa8.34□□□□□ -1.07
HMGXB4-201ENST00000216106 TRAF3IP1Q8TDR0 691 aaPredicted RBP8.34□□□□□ -1.07
HMGXB4-201ENST00000216106 CPT1BQ92523 772 aa8.34□□□□□ -1.07
HMGXB4-201ENST00000216106 FARP1Q9Y4F1 1045 aaPredicted RBP8.34□□□□□ -1.07
HMGXB4-201ENST00000216106 EXOC1LA0A1B0GW35 172 aa8.34□□□□□ -1.07
HMGXB4-201ENST00000216106 TMEM120BA0PK00 339 aa8.34□□□□□ -1.07
HMGXB4-201ENST00000216106 MEIS3P2A8K0S8 358 aa8.34□□□□□ -1.07
HMGXB4-201ENST00000216106 SETSIPP0DME0 302 aa8.34□□□□□ -1.07
HMGXB4-201ENST00000216106 CTGFP29279 349 aa8.34□□□□□ -1.07
HMGXB4-201ENST00000216106 ATP5DP30049 168 aa8.34□□□□□ -1.07
HMGXB4-201ENST00000216106 TAF6P49848 677 aa8.34□□□□□ -1.07
HMGXB4-201ENST00000216106 ATXN1P54253 815 aaKnown RBP8.34□□□□□ -1.07
HMGXB4-201ENST00000216106 CORO7P57737 925 aa8.34□□□□□ -1.07
HMGXB4-201ENST00000216106 BST2Q10589 180 aaKnown RBP8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms