RNA–Protein interactions for RNA: ENST00000215793.12

SF3A1-201, Transcript of splicing factor 3a subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3A1, Length 5,143 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-201ENST00000215793 TRIM66O15016 1216 aa14.04□□□□□ -0.16
SF3A1-201ENST00000215793 ALDH7A1P49419 539 aaKnown RBP14.04□□□□□ -0.16
SF3A1-201ENST00000215793 OTUD4Q01804 1114 aaKnown RBP14.04□□□□□ -0.16
SF3A1-201ENST00000215793 Q4G0T1 1027 aa14.04□□□□□ -0.16
SF3A1-201ENST00000215793 RBM43Q6ZSC3 357 aaKnown RBP14.04□□□□□ -0.16
SF3A1-201ENST00000215793 ZNF720Q7Z2F6 126 aa14.04□□□□□ -0.16
SF3A1-201ENST00000215793 SLFN11Q7Z7L1 901 aa14.04□□□□□ -0.16
SF3A1-201ENST00000215793 BLOC1S5Q8TDH9 187 aa14.04□□□□□ -0.16
SF3A1-201ENST00000215793 DIS3LQ8TF46 1054 aaKnown RBP14.04□□□□□ -0.16
SF3A1-201ENST00000215793 ATG4AQ8WYN0 398 aa14.04□□□□□ -0.16
SF3A1-201ENST00000215793 TMEM169Q96HH4 297 aa14.04□□□□□ -0.16
SF3A1-201ENST00000215793 HES6Q96HZ4 224 aa14.04□□□□□ -0.16
SF3A1-201ENST00000215793 DRG1Q9Y295 367 aaKnown RBP14.04□□□□□ -0.16
SF3A1-201ENST00000215793 SLCO1B7G3V0H7 640 aa14.04□□□□□ -0.16
SF3A1-201ENST00000215793 CASP4P49662 377 aa14.04□□□□□ -0.16
SF3A1-201ENST00000215793 CCNG2Q16589 344 aa14.04□□□□□ -0.16
SF3A1-201ENST00000215793 C4orf19Q8IY42 314 aa14.04□□□□□ -0.16
SF3A1-201ENST00000215793 MYCBPAPQ8TBZ2 947 aa14.04□□□□□ -0.16
SF3A1-201ENST00000215793 PNKPQ96T60 521 aa14.04□□□□□ -0.16
SF3A1-201ENST00000215793 THUMPD3Q9BV44 507 aaKnown RBP14.04□□□□□ -0.16
SF3A1-201ENST00000215793 TMEM245Q9H330 911 aa14.04□□□□□ -0.16
SF3A1-201ENST00000215793 SLC24A2Q9UI40 661 aa14.04□□□□□ -0.16
SF3A1-201ENST00000215793 F5H5T6 163 aa14.03□□□□□ -0.16
SF3A1-201ENST00000215793 HUNKP57058 714 aa14.03□□□□□ -0.16
SF3A1-201ENST00000215793 PLOD1Q02809 727 aaPredicted RBP14.03□□□□□ -0.16
SF3A1-201ENST00000215793 CYLC2Q14093 348 aaPredicted RBP14.03□□□□□ -0.16
SF3A1-201ENST00000215793 SAMD7Q7Z3H4 446 aa14.03□□□□□ -0.16
SF3A1-201ENST00000215793 ACOT1Q86TX2 421 aa14.03□□□□□ -0.16
SF3A1-201ENST00000215793 ACER1Q8TDN7 264 aa14.03□□□□□ -0.16
SF3A1-201ENST00000215793 APBB2Q92870 758 aa14.03□□□□□ -0.16
SF3A1-201ENST00000215793 FUT8Q9BYC5 575 aa14.03□□□□□ -0.16
SF3A1-201ENST00000215793 MROH8Q9H579 483 aa14.03□□□□□ -0.16
SF3A1-201ENST00000215793 AAASQ9NRG9 546 aa14.03□□□□□ -0.16
SF3A1-201ENST00000215793 TUBGCP4Q9UGJ1 667 aa14.03□□□□□ -0.16
SF3A1-201ENST00000215793 NEXMIFQ5QGS0 1516 aa14.03□□□□□ -0.16
SF3A1-201ENST00000215793 H7C4K7 107 aa14.03□□□□□ -0.16
SF3A1-201ENST00000215793 RRM1P23921 792 aa14.03□□□□□ -0.16
SF3A1-201ENST00000215793 DENND5BQ6ZUT9 1274 aa14.03□□□□□ -0.16
SF3A1-201ENST00000215793 SLC26A11Q86WA9 606 aa14.03□□□□□ -0.16
SF3A1-201ENST00000215793 SEMA6BQ9H3T3 888 aa14.03□□□□□ -0.16
SF3A1-201ENST00000215793 F8VZ95 297 aa14.03□□□□□ -0.16
SF3A1-201ENST00000215793 GRK2P25098 689 aa14.03□□□□□ -0.16
SF3A1-201ENST00000215793 SOAT1P35610 550 aa14.03□□□□□ -0.16
SF3A1-201ENST00000215793 WDR49Q8IV35 697 aa14.03□□□□□ -0.16
SF3A1-201ENST00000215793 FAM172AQ8WUF8 416 aa14.03□□□□□ -0.16
SF3A1-201ENST00000215793 F8W810 466 aa14.03□□□□□ -0.16
SF3A1-201ENST00000215793 O00370 1275 aa14.03□□□□□ -0.16
SF3A1-201ENST00000215793 ARP10275 920 aa14.03□□□□□ -0.16
SF3A1-201ENST00000215793 PRIM2P49643 509 aa14.03□□□□□ -0.16
SF3A1-201ENST00000215793 ANXA11P50995 505 aaKnown RBP14.03□□□□□ -0.16
SF3A1-201ENST00000215793 NCKAP1LP55160 1127 aa14.03□□□□□ -0.16
SF3A1-201ENST00000215793 GLRA4Q5JXX5 417 aa14.03□□□□□ -0.16
SF3A1-201ENST00000215793 CDKAL1Q5VV42 579 aa14.03□□□□□ -0.16
SF3A1-201ENST00000215793 GMCL1P1Q8NEA9 526 aa14.03□□□□□ -0.16
SF3A1-201ENST00000215793 FBXO25Q8TCJ0 367 aa14.03□□□□□ -0.16
SF3A1-201ENST00000215793 EPS8L3Q8TE67 593 aaKnown RBP14.03□□□□□ -0.16
SF3A1-201ENST00000215793 ZNF333Q96JL9 665 aa14.03□□□□□ -0.16
SF3A1-201ENST00000215793 SEPT3Q9UH03 358 aa14.03□□□□□ -0.16
SF3A1-201ENST00000215793 L1RE1Q9UN81 338 aa14.03□□□□□ -0.16
SF3A1-201ENST00000215793 TMX2Q9Y320 296 aa14.03□□□□□ -0.16
SF3A1-201ENST00000215793 COPG1Q9Y678 874 aaKnown RBP14.03□□□□□ -0.16
SF3A1-201ENST00000215793 EGFRP00533 1210 aa14.02□□□□□ -0.16
SF3A1-201ENST00000215793 LRG1P02750 347 aa14.02□□□□□ -0.16
SF3A1-201ENST00000215793 TOB1P50616 345 aaPredicted RBP14.02□□□□□ -0.16
SF3A1-201ENST00000215793 BACE1P56817 501 aa14.02□□□□□ -0.16
SF3A1-201ENST00000215793 TTC33Q6PID6 262 aaPredicted RBP14.02□□□□□ -0.16
SF3A1-201ENST00000215793 NOD2Q9HC29 1040 aa14.02□□□□□ -0.16
SF3A1-201ENST00000215793 PDP2Q9P2J9 529 aa14.02□□□□□ -0.16
SF3A1-201ENST00000215793 MZF1P28698 734 aaPredicted RBP14.02□□□□□ -0.16
SF3A1-201ENST00000215793 NCALDP61601 193 aa14.02□□□□□ -0.16
SF3A1-201ENST00000215793 OVGP1Q12889 678 aa14.02□□□□□ -0.16
SF3A1-201ENST00000215793 SEZ6Q53EL9 994 aa14.02□□□□□ -0.16
SF3A1-201ENST00000215793 KCNT1Q5JUK3 1230 aa14.02□□□□□ -0.16
SF3A1-201ENST00000215793 FAM117BQ6P1L5 589 aa14.02□□□□□ -0.16
SF3A1-201ENST00000215793 IMPAD1Q9NX62 359 aa14.02□□□□□ -0.16
SF3A1-201ENST00000215793 KLK14Q9P0G3 267 aa14.02□□□□□ -0.16
SF3A1-201ENST00000215793 RNF112Q9ULX5 631 aa14.02□□□□□ -0.16
SF3A1-201ENST00000215793 RBP1P09455 135 aa14.02□□□□□ -0.17
SF3A1-201ENST00000215793 ALOX15P16050 662 aaPredicted RBP14.02□□□□□ -0.17
SF3A1-201ENST00000215793 TARSP26639 723 aaKnown RBP14.02□□□□□ -0.17
SF3A1-201ENST00000215793 MAPK1P28482 360 aa14.02□□□□□ -0.17
SF3A1-201ENST00000215793 SOX11P35716 441 aa14.02□□□□□ -0.17
SF3A1-201ENST00000215793 CLCN3P51790 818 aa14.02□□□□□ -0.17
SF3A1-201ENST00000215793 SREBF2Q12772 1141 aa14.02□□□□□ -0.17
SF3A1-201ENST00000215793 KPNB1Q14974 876 aaKnown RBP14.02□□□□□ -0.17
SF3A1-201ENST00000215793 SEC23AQ15436 765 aa14.02□□□□□ -0.17
SF3A1-201ENST00000215793 SRPK1Q96SB4 655 aaKnown RBP14.02□□□□□ -0.17
SF3A1-201ENST00000215793 TMBIM4Q9HC24 238 aa14.02□□□□□ -0.17
SF3A1-201ENST00000215793 SYTL2Q9HCH5 934 aa14.02□□□□□ -0.17
SF3A1-201ENST00000215793 DSEQ9UL01 958 aa14.02□□□□□ -0.17
SF3A1-201ENST00000215793 LZTS1Q9Y250 596 aa14.02□□□□□ -0.17
SF3A1-201ENST00000215793 DUSP10Q9Y6W6 482 aa14.02□□□□□ -0.17
SF3A1-201ENST00000215793 E7ENQ6 273 aa14.02□□□□□ -0.17
SF3A1-201ENST00000215793 NCAM2O15394 837 aa14.02□□□□□ -0.17
SF3A1-201ENST00000215793 HOXA2O43364 376 aa14.02□□□□□ -0.17
SF3A1-201ENST00000215793 ASS1P00966 412 aaKnown RBP14.02□□□□□ -0.17
SF3A1-201ENST00000215793 SERPINB3P29508 390 aa14.02□□□□□ -0.17
SF3A1-201ENST00000215793 PCNX4Q63HM2 1172 aa14.02□□□□□ -0.17
SF3A1-201ENST00000215793 SPOCD1Q6ZMY3 1216 aa14.02□□□□□ -0.17
SF3A1-201ENST00000215793 OOSP2Q86WS3 158 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms