RNA–Protein interactions for RNA: ENST00000040877.1

TARBP1-201, Transcript of TAR (HIV-1) RNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TARBP1, Length 5,130 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARBP1-201ENST00000040877 ILF2Q12905 390 aaKnown RBP24.01■■□□□ 1.43
TARBP1-201ENST00000040877 WDR93Q6P2C0 686 aa24.01■■□□□ 1.43
TARBP1-201ENST00000040877 ARMC2Q8NEN0 867 aa24.01■■□□□ 1.43
TARBP1-201ENST00000040877 OR2W6PQ8NHA6 318 aa24.01■■□□□ 1.43
TARBP1-201ENST00000040877 CPB2Q96IY4 423 aa24.01■■□□□ 1.43
TARBP1-201ENST00000040877 PRPF18Q99633 342 aaKnown RBP24.01■■□□□ 1.43
TARBP1-201ENST00000040877 EMILIN2Q9BXX0 1053 aa24.01■■□□□ 1.43
TARBP1-201ENST00000040877 UBXN6Q9BZV1 441 aa24.01■■□□□ 1.43
TARBP1-201ENST00000040877 AP4E1Q9UPM8 1137 aa24.01■■□□□ 1.43
TARBP1-201ENST00000040877 C2CD2LO14523 706 aa24.01■■□□□ 1.43
TARBP1-201ENST00000040877 USP50Q70EL3 339 aaPredicted RBP24.01■■□□□ 1.43
TARBP1-201ENST00000040877 OLFM3Q96PB7 478 aa24.01■■□□□ 1.43
TARBP1-201ENST00000040877 L2HGDHQ9H9P8 463 aa24.01■■□□□ 1.43
TARBP1-201ENST00000040877 TRMT6Q9UJA5 497 aaKnown RBP24.01■■□□□ 1.43
TARBP1-201ENST00000040877 FAM32AQ9Y421 112 aaKnown RBP24.01■■□□□ 1.43
TARBP1-201ENST00000040877 ACKR2O00590 384 aa24.01■■□□□ 1.43
TARBP1-201ENST00000040877 ASS1P00966 412 aaKnown RBP24.01■■□□□ 1.43
TARBP1-201ENST00000040877 MBL2P11226 248 aaPredicted RBP24.01■■□□□ 1.43
TARBP1-201ENST00000040877 MKL1Q969V6 931 aa24.01■■□□□ 1.43
TARBP1-201ENST00000040877 OSMRQ99650 979 aa24.01■■□□□ 1.43
TARBP1-201ENST00000040877 FAM167BQ9BTA0 163 aa24.01■■□□□ 1.43
TARBP1-201ENST00000040877 ARL4DP49703 201 aa24■■□□□ 1.43
TARBP1-201ENST00000040877 OXCT1P55809 520 aa24■■□□□ 1.43
TARBP1-201ENST00000040877 CCNG2Q16589 344 aa24■■□□□ 1.43
TARBP1-201ENST00000040877 AASDHQ4L235 1098 aaPredicted RBP24■■□□□ 1.43
TARBP1-201ENST00000040877 NT5DC1Q5TFE4 455 aa24■■□□□ 1.43
TARBP1-201ENST00000040877 DDX4Q9NQI0 724 aaKnown RBP24■■□□□ 1.43
TARBP1-201ENST00000040877 CHORDC1Q9UHD1 332 aaPredicted RBP24■■□□□ 1.43
TARBP1-201ENST00000040877 USP18Q9UMW8 372 aa24■■□□□ 1.43
TARBP1-201ENST00000040877 LSP1P33241 339 aa24■■□□□ 1.43
TARBP1-201ENST00000040877 FAR2Q96K12 515 aa24■■□□□ 1.43
TARBP1-201ENST00000040877 INTS13Q9NVM9 706 aa24■■□□□ 1.43
TARBP1-201ENST00000040877 PDHA1P08559 390 aa24■■□□□ 1.43
TARBP1-201ENST00000040877 HIST2H2ACQ16777 129 aaPredicted RBP24■■□□□ 1.43
TARBP1-201ENST00000040877 HIST2H2AA3Q6FI13 130 aa24■■□□□ 1.43
TARBP1-201ENST00000040877 CAPRIN2Q6IMN6 1127 aaKnown RBP24■■□□□ 1.43
TARBP1-201ENST00000040877 SLC30A10Q6XR72 485 aa24■■□□□ 1.43
TARBP1-201ENST00000040877 SPOCD1Q6ZMY3 1216 aa24■■□□□ 1.43
TARBP1-201ENST00000040877 VGLL2Q8N8G2 317 aa24■■□□□ 1.43
TARBP1-201ENST00000040877 ADAM33Q9BZ11 813 aa24■■□□□ 1.43
TARBP1-201ENST00000040877 CXCL8P10145 99 aa24■■□□□ 1.43
TARBP1-201ENST00000040877 RARGP13631 454 aa24■■□□□ 1.43
TARBP1-201ENST00000040877 CCDC90BQ9GZT6 254 aa24■■□□□ 1.43
TARBP1-201ENST00000040877 AURKCQ9UQB9 309 aa24■■□□□ 1.43
TARBP1-201ENST00000040877 CLCA2Q9UQC9 943 aa24■■□□□ 1.43
TARBP1-201ENST00000040877 CNTFP26441 200 aa23.99■■□□□ 1.43
TARBP1-201ENST00000040877 MIB1Q86YT6 1006 aa23.99■■□□□ 1.43
TARBP1-201ENST00000040877 DCDC2Q9UHG0 476 aa23.99■■□□□ 1.43
TARBP1-201ENST00000040877 FAM86B1E9PN63 330 aa23.99■■□□□ 1.43
TARBP1-201ENST00000040877 HNRNPRO43390 633 aaKnown RBP23.99■■□□□ 1.43
TARBP1-201ENST00000040877 FAM86B2P0C5J1 330 aa23.99■■□□□ 1.43
TARBP1-201ENST00000040877 HSD17B3P37058 310 aa23.99■■□□□ 1.43
TARBP1-201ENST00000040877 EPHB3P54753 998 aa23.99■■□□□ 1.43
TARBP1-201ENST00000040877 OTUD4Q01804 1114 aaKnown RBP23.99■■□□□ 1.43
TARBP1-201ENST00000040877 MROH9Q5TGP6 573 aa23.99■■□□□ 1.43
TARBP1-201ENST00000040877 SPATA17Q96L03 361 aa23.99■■□□□ 1.43
TARBP1-201ENST00000040877 TOMM70O94826 608 aa23.99■■□□□ 1.43
TARBP1-201ENST00000040877 ZNF571Q7Z3V5 609 aaPredicted RBP23.99■■□□□ 1.43
TARBP1-201ENST00000040877 UNC45BQ8IWX7 931 aa23.99■■□□□ 1.43
TARBP1-201ENST00000040877 KCNV2Q8TDN2 545 aa23.99■■□□□ 1.43
TARBP1-201ENST00000040877 PNMA5Q96PV4 448 aa23.99■■□□□ 1.43
TARBP1-201ENST00000040877 ASCC2Q9H1I8 757 aaPredicted RBP23.99■■□□□ 1.43
TARBP1-201ENST00000040877 SETD4Q9NVD3 440 aa23.99■■□□□ 1.43
TARBP1-201ENST00000040877 ARHGEF28Q8N1W1 1705 aaKnown RBP23.99■■□□□ 1.43
TARBP1-201ENST00000040877 ADCY3O60266 1144 aa23.99■■□□□ 1.43
TARBP1-201ENST00000040877 ALDH2P05091 517 aa23.99■■□□□ 1.43
TARBP1-201ENST00000040877 CKMP06732 381 aa23.99■■□□□ 1.43
TARBP1-201ENST00000040877 POP1Q99575 1024 aaKnown RBP23.99■■□□□ 1.43
TARBP1-201ENST00000040877 SELENONQ9NZV5 590 aa23.99■■□□□ 1.43
TARBP1-201ENST00000040877 MARCOQ9UEW3 520 aaPredicted RBP23.99■■□□□ 1.43
TARBP1-201ENST00000040877 MROH2AA6NES4 1674 aa23.99■■□□□ 1.43
TARBP1-201ENST00000040877 GOLGA8TH3BQL2 631 aa23.98■■□□□ 1.43
TARBP1-201ENST00000040877 SERPIND1P05546 499 aa23.98■■□□□ 1.43
TARBP1-201ENST00000040877 PSMC6P62333 389 aa23.98■■□□□ 1.43
TARBP1-201ENST00000040877 POU4F1Q01851 419 aa23.98■■□□□ 1.43
TARBP1-201ENST00000040877 KIAA0895Q8NCT3 520 aa23.98■■□□□ 1.43
TARBP1-201ENST00000040877 FER1L4A9Z1Z3 1794 aa23.98■■□□□ 1.43
TARBP1-201ENST00000040877 ZNF268Q14587 947 aaPredicted RBP23.98■■□□□ 1.43
TARBP1-201ENST00000040877 LY6KQ17RY6 165 aa23.98■■□□□ 1.43
TARBP1-201ENST00000040877 DHX30Q7L2E3 1194 aaKnown RBP eCLIP23.98■■□□□ 1.43
TARBP1-201ENST00000040877 ITIH5Q86UX2 942 aa23.98■■□□□ 1.43
TARBP1-201ENST00000040877 TNIP2Q8NFZ5 429 aa23.98■■□□□ 1.43
TARBP1-201ENST00000040877 APBB2Q92870 758 aa23.98■■□□□ 1.43
TARBP1-201ENST00000040877 ENO3P13929 434 aaPredicted RBP23.98■■□□□ 1.43
TARBP1-201ENST00000040877 KCNK10P57789 538 aa23.98■■□□□ 1.43
TARBP1-201ENST00000040877 DDR1Q08345 913 aa23.98■■□□□ 1.43
TARBP1-201ENST00000040877 KBTBD12Q3ZCT8 623 aa23.98■■□□□ 1.43
TARBP1-201ENST00000040877 IQSEC1Q6DN90 963 aa23.98■■□□□ 1.43
TARBP1-201ENST00000040877 HERC6Q8IVU3 1022 aa23.98■■□□□ 1.43
TARBP1-201ENST00000040877 P2RX7Q99572 595 aaKnown RBP23.98■■□□□ 1.43
TARBP1-201ENST00000040877 FBXO44Q9H4M3 255 aa23.98■■□□□ 1.43
TARBP1-201ENST00000040877 SLC25A13Q9UJS0 675 aa23.98■■□□□ 1.43
TARBP1-201ENST00000040877 PHF20L1A8MW92 1017 aa23.98■■□□□ 1.43
TARBP1-201ENST00000040877 VPS26AO75436 327 aa23.98■■□□□ 1.43
TARBP1-201ENST00000040877 BTNL9Q6UXG8 535 aa23.98■■□□□ 1.43
TARBP1-201ENST00000040877 TRPM8Q7Z2W7 1104 aa23.98■■□□□ 1.43
TARBP1-201ENST00000040877 BRSK2Q8IWQ3 736 aa23.98■■□□□ 1.43
TARBP1-201ENST00000040877 RXFP2Q8WXD0 754 aa23.98■■□□□ 1.43
TARBP1-201ENST00000040877 ACSF2Q96CM8 615 aaPredicted RBP23.98■■□□□ 1.43
TARBP1-201ENST00000040877 SEC16BQ96JE7 1060 aa23.98■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms