RNA–Protein interactions for RNA: ENST00000023939.8

RTFDC1-201, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-201ENST00000023939 MYCNP04198 464 aaPredicted RBP15□□□□□ -0.01
RTFDC1-201ENST00000023939 ITGAVP06756 1048 aa15□□□□□ -0.01
RTFDC1-201ENST00000023939 NUDT17P0C025 328 aa15□□□□□ -0.01
RTFDC1-201ENST00000023939 DESP17661 470 aa15□□□□□ -0.01
RTFDC1-201ENST00000023939 PTPN1P18031 435 aaKnown RBP15□□□□□ -0.01
RTFDC1-201ENST00000023939 KLRC2P26717 231 aa15□□□□□ -0.01
RTFDC1-201ENST00000023939 ARSEP51690 589 aa15□□□□□ -0.01
RTFDC1-201ENST00000023939 VCPP55072 806 aaKnown RBP15□□□□□ -0.01
RTFDC1-201ENST00000023939 EIF3BP55884 814 aaKnown RBP15□□□□□ -0.01
RTFDC1-201ENST00000023939 PLCB3Q01970 1234 aa15□□□□□ -0.01
RTFDC1-201ENST00000023939 BYSLQ13895 437 aaKnown RBP15□□□□□ -0.01
RTFDC1-201ENST00000023939 OASLQ15646 514 aaKnown RBP15□□□□□ -0.01
RTFDC1-201ENST00000023939 BOLA3Q53S33 107 aa15□□□□□ -0.01
RTFDC1-201ENST00000023939 ZNF598Q86UK7 904 aaKnown RBP15□□□□□ -0.01
RTFDC1-201ENST00000023939 SCUBE3Q8IX30 993 aa15□□□□□ -0.01
RTFDC1-201ENST00000023939 FUKQ8N0W3 1084 aa15□□□□□ -0.01
RTFDC1-201ENST00000023939 KCTD13Q8WZ19 329 aa15□□□□□ -0.01
RTFDC1-201ENST00000023939 LPPQ93052 612 aa15□□□□□ -0.01
RTFDC1-201ENST00000023939 CCDC114Q96M63 670 aa15□□□□□ -0.01
RTFDC1-201ENST00000023939 LPIN3Q9BQK8 851 aa15□□□□□ -0.01
RTFDC1-201ENST00000023939 C11orf84Q9BUA3 381 aaPredicted RBP15□□□□□ -0.01
RTFDC1-201ENST00000023939 DUSP16Q9BY84 665 aa15□□□□□ -0.01
RTFDC1-201ENST00000023939 PABPC3Q9H361 631 aaKnown RBP15□□□□□ -0.01
RTFDC1-201ENST00000023939 FAM204AQ9H8W3 233 aa15□□□□□ -0.01
RTFDC1-201ENST00000023939 RSAD1Q9HA92 442 aa15□□□□□ -0.01
RTFDC1-201ENST00000023939 ASIC3Q9UHC3 531 aa15□□□□□ -0.01
RTFDC1-201ENST00000023939 GOLGA6CA6NDK9 693 aa15□□□□□ -0.01
RTFDC1-201ENST00000023939 ZNF487B1APH4 448 aa15□□□□□ -0.01
RTFDC1-201ENST00000023939 GOLGA6DP0CG33 693 aa15□□□□□ -0.01
RTFDC1-201ENST00000023939 RARGP13631 454 aa15□□□□□ -0.01
RTFDC1-201ENST00000023939 ATF2P15336 505 aa15□□□□□ -0.01
RTFDC1-201ENST00000023939 ADORA2BP29275 332 aa15□□□□□ -0.01
RTFDC1-201ENST00000023939 TKTP29401 623 aaKnown RBP15□□□□□ -0.01
RTFDC1-201ENST00000023939 SDC4P31431 198 aa15□□□□□ -0.01
RTFDC1-201ENST00000023939 SCNN1GP51170 649 aa15□□□□□ -0.01
RTFDC1-201ENST00000023939 CLCNKBP51801 687 aa15□□□□□ -0.01
RTFDC1-201ENST00000023939 AFF1P51825 1210 aaKnown RBP15□□□□□ -0.01
RTFDC1-201ENST00000023939 PMS2P54278 862 aa15□□□□□ -0.01
RTFDC1-201ENST00000023939 GRIK3Q13003 919 aa15□□□□□ -0.01
RTFDC1-201ENST00000023939 UPP1Q16831 310 aa15□□□□□ -0.01
RTFDC1-201ENST00000023939 KAZNQ674X7 775 aa15□□□□□ -0.01
RTFDC1-201ENST00000023939 TRAF7Q6Q0C0 670 aa15□□□□□ -0.01
RTFDC1-201ENST00000023939 ZNF365Q70YC5 407 aa15□□□□□ -0.01
RTFDC1-201ENST00000023939 ALLCQ8N6M5 410 aa15□□□□□ -0.01
RTFDC1-201ENST00000023939 CENPIQ92674 756 aaPredicted RBP15□□□□□ -0.01
RTFDC1-201ENST00000023939 ACSF2Q96CM8 615 aaPredicted RBP15□□□□□ -0.01
RTFDC1-201ENST00000023939 UROC1Q96N76 676 aa15□□□□□ -0.01
RTFDC1-201ENST00000023939 PEBP4Q96S96 227 aa15□□□□□ -0.01
RTFDC1-201ENST00000023939 ADAM2Q99965 735 aa15□□□□□ -0.01
RTFDC1-201ENST00000023939 SEZ6LQ9BYH1 1024 aa15□□□□□ -0.01
RTFDC1-201ENST00000023939 FOXP3Q9BZS1 431 aa15□□□□□ -0.01
RTFDC1-201ENST00000023939 EPB41L4BQ9H329 900 aa15□□□□□ -0.01
RTFDC1-201ENST00000023939 GOLGA6AQ9NYA3 693 aa15□□□□□ -0.01
RTFDC1-201ENST00000023939 PCSK1NQ9UHG2 260 aa15□□□□□ -0.01
RTFDC1-201ENST00000023939 DNPEPQ9ULA0 475 aa15□□□□□ -0.01
RTFDC1-201ENST00000023939 PRPSAP2O60256 369 aa14.99□□□□□ -0.01
RTFDC1-201ENST00000023939 INHAP05111 366 aa14.99□□□□□ -0.01
RTFDC1-201ENST00000023939 SLC8A3P57103 927 aa14.99□□□□□ -0.01
RTFDC1-201ENST00000023939 ZNF844Q08AG5 666 aa14.99□□□□□ -0.01
RTFDC1-201ENST00000023939 PDK2Q15119 407 aa14.99□□□□□ -0.01
RTFDC1-201ENST00000023939 TAF5Q15542 800 aa14.99□□□□□ -0.01
RTFDC1-201ENST00000023939 KCTD19Q17RG1 926 aaPredicted RBP14.99□□□□□ -0.01
RTFDC1-201ENST00000023939 SMTNL2Q2TAL5 461 aa14.99□□□□□ -0.01
RTFDC1-201ENST00000023939 TTMPQ5BVD1 217 aa14.99□□□□□ -0.01
RTFDC1-201ENST00000023939 KCNT1Q5JUK3 1230 aa14.99□□□□□ -0.01
RTFDC1-201ENST00000023939 EMC10Q5UCC4 262 aa14.99□□□□□ -0.01
RTFDC1-201ENST00000023939 FAM43BQ6ZT52 329 aaPredicted RBP14.99□□□□□ -0.01
RTFDC1-201ENST00000023939 PAQR9Q6ZVX9 377 aa14.99□□□□□ -0.01
RTFDC1-201ENST00000023939 KCTD6Q8NC69 237 aa14.99□□□□□ -0.01
RTFDC1-201ENST00000023939 UBLCP1Q8WVY7 318 aaPredicted RBP14.99□□□□□ -0.01
RTFDC1-201ENST00000023939 ARL8AQ96BM9 186 aa14.99□□□□□ -0.01
RTFDC1-201ENST00000023939 HMX1Q9NP08 348 aaPredicted RBP14.99□□□□□ -0.01
RTFDC1-201ENST00000023939 ATP8A1Q9Y2Q0 1164 aa14.99□□□□□ -0.01
RTFDC1-201ENST00000023939 PIK3R2O00459 728 aa14.98□□□□□ -0.01
RTFDC1-201ENST00000023939 NDC80O14777 642 aa14.98□□□□□ -0.01
RTFDC1-201ENST00000023939 MDM4O15151 490 aa14.98□□□□□ -0.01
RTFDC1-201ENST00000023939 KRT14P02533 472 aa14.98□□□□□ -0.01
RTFDC1-201ENST00000023939 CKBP12277 381 aa14.98□□□□□ -0.01
RTFDC1-201ENST00000023939 NPR3P17342 541 aa14.98□□□□□ -0.01
RTFDC1-201ENST00000023939 GYS2P54840 703 aa14.98□□□□□ -0.01
RTFDC1-201ENST00000023939 C15orf59Q2T9L4 293 aaPredicted RBP14.98□□□□□ -0.01
RTFDC1-201ENST00000023939 EFHC1Q5JVL4 640 aa14.98□□□□□ -0.01
RTFDC1-201ENST00000023939 TRMT10CQ7L0Y3 403 aaKnown RBP14.98□□□□□ -0.01
RTFDC1-201ENST00000023939 ECHDC2Q86YB7 292 aa14.98□□□□□ -0.01
RTFDC1-201ENST00000023939 FAM76AQ8TAV0 307 aa14.98□□□□□ -0.01
RTFDC1-201ENST00000023939 DDX23Q9BUQ8 820 aaKnown RBP14.98□□□□□ -0.01
RTFDC1-201ENST00000023939 B3GNT5Q9BYG0 378 aa14.98□□□□□ -0.01
RTFDC1-201ENST00000023939 TMBIM4Q9HC24 238 aa14.98□□□□□ -0.01
RTFDC1-201ENST00000023939 DDX43Q9NXZ2 648 aaKnown RBP14.98□□□□□ -0.01
RTFDC1-201ENST00000023939 CDH9Q9ULB4 789 aa14.98□□□□□ -0.01
RTFDC1-201ENST00000023939 HMGB1P1B2RPK0 211 aaPredicted RBP14.97□□□□□ -0.01
RTFDC1-201ENST00000023939 APOC4-APOC2K7ER74 178 aa14.97□□□□□ -0.01
RTFDC1-201ENST00000023939 CST8O60676 142 aa14.97□□□□□ -0.01
RTFDC1-201ENST00000023939 FKTNO75072 461 aa14.97□□□□□ -0.01
RTFDC1-201ENST00000023939 ATP2C2O75185 946 aa14.97□□□□□ -0.01
RTFDC1-201ENST00000023939 GRAP2O75791 330 aa14.97□□□□□ -0.01
RTFDC1-201ENST00000023939 APOC2P02655 101 aa14.97□□□□□ -0.01
RTFDC1-201ENST00000023939 CYP11A1P05108 521 aa14.97□□□□□ -0.01
RTFDC1-201ENST00000023939 IGFBP6P24592 240 aaPredicted RBP14.97□□□□□ -0.01
RTFDC1-201ENST00000023939 ADCY8P40145 1251 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms