RNA–Protein interactions for RNA: ENST00000005226.11

USH1C-201, Transcript of USH1 protein network component harmonin, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USH1C, Length 2,700 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-201ENST00000005226 MTO1Q9Y2Z2 717 aaKnown RBP14.65□□□□□ -0.06
USH1C-201ENST00000005226 WNT10BO00744 389 aa14.65□□□□□ -0.06
USH1C-201ENST00000005226 UBTFL6P0CB48 400 aaPredicted RBP14.65□□□□□ -0.06
USH1C-201ENST00000005226 CCDC62Q6P9F0 684 aa14.65□□□□□ -0.06
USH1C-201ENST00000005226 SH2D5Q6ZV89 423 aa14.65□□□□□ -0.06
USH1C-201ENST00000005226 CCDC33Q8N5R6 958 aa14.65□□□□□ -0.06
USH1C-201ENST00000005226 STMN2Q93045 179 aa14.65□□□□□ -0.06
USH1C-201ENST00000005226 APOPT1Q96IL0 206 aa14.65□□□□□ -0.06
USH1C-201ENST00000005226 CPXM1Q96SM3 734 aa14.65□□□□□ -0.06
USH1C-201ENST00000005226 KRT82Q9NSB4 513 aa14.65□□□□□ -0.06
USH1C-201ENST00000005226 C2CD2Q9Y426 696 aa14.65□□□□□ -0.06
USH1C-201ENST00000005226 ADGRA2Q96PE1 1338 aa14.65□□□□□ -0.06
USH1C-201ENST00000005226 LMNAP02545 664 aaKnown RBP14.65□□□□□ -0.07
USH1C-201ENST00000005226 DHRS4L1P0CG22 281 aa14.65□□□□□ -0.07
USH1C-201ENST00000005226 SRGAP2CP0DJJ0 459 aa14.65□□□□□ -0.07
USH1C-201ENST00000005226 MIPP30301 263 aa14.65□□□□□ -0.07
USH1C-201ENST00000005226 SMAD1Q15797 465 aaKnown RBP14.65□□□□□ -0.07
USH1C-201ENST00000005226 FOXB2Q5VYV0 432 aa14.65□□□□□ -0.07
USH1C-201ENST00000005226 ARID3BQ8IVW6 561 aaPredicted RBP14.65□□□□□ -0.07
USH1C-201ENST00000005226 RDM1Q8NG50 284 aa14.65□□□□□ -0.07
USH1C-201ENST00000005226 SRPK1Q96SB4 655 aaKnown RBP14.65□□□□□ -0.07
USH1C-201ENST00000005226 SYNCQ9H7C4 482 aa14.65□□□□□ -0.07
USH1C-201ENST00000005226 IQANK1A0A1B0GTG1 560 aa14.64□□□□□ -0.07
USH1C-201ENST00000005226 ERBB2P04626 1255 aa14.64□□□□□ -0.07
USH1C-201ENST00000005226 SUPT20HL2P0C7V6 817 aa14.64□□□□□ -0.07
USH1C-201ENST00000005226 RARBP10826 455 aa14.64□□□□□ -0.07
USH1C-201ENST00000005226 PTPN7P35236 360 aa14.64□□□□□ -0.07
USH1C-201ENST00000005226 CAPSQ13938 189 aa14.64□□□□□ -0.07
USH1C-201ENST00000005226 SUPT20HL1Q3ZLR7 823 aa14.64□□□□□ -0.07
USH1C-201ENST00000005226 SLFN12LQ6IEE8 588 aa14.64□□□□□ -0.07
USH1C-201ENST00000005226 ZCCHC23Q6ZST2 131 aa14.64□□□□□ -0.07
USH1C-201ENST00000005226 THNSL1Q8IYQ7 743 aa14.64□□□□□ -0.07
USH1C-201ENST00000005226 SLC44A1Q8WWI5 657 aa14.64□□□□□ -0.07
USH1C-201ENST00000005226 C20orf27Q9GZN8 174 aa14.64□□□□□ -0.07
USH1C-201ENST00000005226 ZCWPW1Q9H0M4 648 aa14.64□□□□□ -0.07
USH1C-201ENST00000005226 STRIP2Q9ULQ0 834 aa14.64□□□□□ -0.07
USH1C-201ENST00000005226 WDR81Q562E7 1941 aa14.64□□□□□ -0.07
USH1C-201ENST00000005226 KIAA1217Q5T5P2 1943 aa14.64□□□□□ -0.07
USH1C-201ENST00000005226 COPEO14579 308 aa14.64□□□□□ -0.07
USH1C-201ENST00000005226 GRAP2O75791 330 aa14.64□□□□□ -0.07
USH1C-201ENST00000005226 AP1G2O75843 785 aa14.64□□□□□ -0.07
USH1C-201ENST00000005226 USP1O94782 785 aa14.64□□□□□ -0.07
USH1C-201ENST00000005226 APBA3O96018 575 aa14.64□□□□□ -0.07
USH1C-201ENST00000005226 KRT19P08727 400 aa14.64□□□□□ -0.07
USH1C-201ENST00000005226 INHBEP58166 350 aa14.64□□□□□ -0.07
USH1C-201ENST00000005226 BST1Q10588 318 aa14.64□□□□□ -0.07
USH1C-201ENST00000005226 TRPC3Q13507 836 aa14.64□□□□□ -0.07
USH1C-201ENST00000005226 OR52E8Q6IFG1 317 aa14.64□□□□□ -0.07
USH1C-201ENST00000005226 CCNJLQ8IV13 435 aa14.64□□□□□ -0.07
USH1C-201ENST00000005226 CEP120Q8N960 986 aa14.64□□□□□ -0.07
USH1C-201ENST00000005226 NSUN6Q8TEA1 469 aaKnown RBP14.64□□□□□ -0.07
USH1C-201ENST00000005226 LPAR1Q92633 364 aa14.64□□□□□ -0.07
USH1C-201ENST00000005226 FAF2Q96CS3 445 aa14.64□□□□□ -0.07
USH1C-201ENST00000005226 PEBP4Q96S96 227 aa14.64□□□□□ -0.07
USH1C-201ENST00000005226 NIF3L1Q9GZT8 377 aa14.64□□□□□ -0.07
USH1C-201ENST00000005226 ASCC2Q9H1I8 757 aaPredicted RBP14.64□□□□□ -0.07
USH1C-201ENST00000005226 PPCSQ9HAB8 311 aa14.64□□□□□ -0.07
USH1C-201ENST00000005226 ZNF302Q9NR11 478 aa14.64□□□□□ -0.07
USH1C-201ENST00000005226 CNTN3Q9P232 1028 aa14.64□□□□□ -0.07
USH1C-201ENST00000005226 TRPC5Q9UL62 973 aaPredicted RBP14.64□□□□□ -0.07
USH1C-201ENST00000005226 H7C0C1 242 aa14.63□□□□□ -0.07
USH1C-201ENST00000005226 LDHAP00338 332 aaKnown RBP14.63□□□□□ -0.07
USH1C-201ENST00000005226 ZCCHC18P0CG32 403 aa14.63□□□□□ -0.07
USH1C-201ENST00000005226 ARL2P36404 184 aa14.63□□□□□ -0.07
USH1C-201ENST00000005226 NAMPTP43490 491 aa14.63□□□□□ -0.07
USH1C-201ENST00000005226 ATP5OP48047 213 aa14.63□□□□□ -0.07
USH1C-201ENST00000005226 ALDH18A1P54886 795 aaKnown RBP14.63□□□□□ -0.07
USH1C-201ENST00000005226 CDO1Q16878 200 aa14.63□□□□□ -0.07
USH1C-201ENST00000005226 SPDYAQ5MJ70 313 aa14.63□□□□□ -0.07
USH1C-201ENST00000005226 PRAMEF18Q5VWM3 479 aa14.63□□□□□ -0.07
USH1C-201ENST00000005226 RBM15BQ8NDT2 890 aaKnown RBP14.63□□□□□ -0.07
USH1C-201ENST00000005226 SH3TC2Q8TF17 1288 aa14.63□□□□□ -0.07
USH1C-201ENST00000005226 ALKBH8Q96BT7 664 aaKnown RBP14.63□□□□□ -0.07
USH1C-201ENST00000005226 TTC1Q99614 292 aa14.63□□□□□ -0.07
USH1C-201ENST00000005226 THTPAQ9BU02 230 aa14.63□□□□□ -0.07
USH1C-201ENST00000005226 IQCGQ9H095 443 aaKnown RBP14.63□□□□□ -0.07
USH1C-201ENST00000005226 SMYD2Q9NRG4 433 aa14.63□□□□□ -0.07
USH1C-201ENST00000005226 PAPOLBQ9NRJ5 636 aaKnown RBP14.63□□□□□ -0.07
USH1C-201ENST00000005226 RAB6BQ9NRW1 208 aa14.63□□□□□ -0.07
USH1C-201ENST00000005226 GPATCH2LQ9NWQ4 482 aa14.63□□□□□ -0.07
USH1C-201ENST00000005226 HMGXB4Q9UGU5 601 aa14.63□□□□□ -0.07
USH1C-201ENST00000005226 DCAF8L1A6NGE4 600 aa14.63□□□□□ -0.07
USH1C-201ENST00000005226 H0YCG3 227 aa14.63□□□□□ -0.07
USH1C-201ENST00000005226 DNAJC6O75061 913 aa14.63□□□□□ -0.07
USH1C-201ENST00000005226 ATG7O95352 703 aa14.63□□□□□ -0.07
USH1C-201ENST00000005226 LSM8O95777 96 aaKnown RBP14.63□□□□□ -0.07
USH1C-201ENST00000005226 BAG2O95816 211 aa14.63□□□□□ -0.07
USH1C-201ENST00000005226 OATP04181 439 aa14.63□□□□□ -0.07
USH1C-201ENST00000005226 POLE2P56282 527 aa14.63□□□□□ -0.07
USH1C-201ENST00000005226 TMPRSS15P98073 1019 aa14.63□□□□□ -0.07
USH1C-201ENST00000005226 SLC18A2Q05940 514 aa14.63□□□□□ -0.07
USH1C-201ENST00000005226 CHI3L2Q15782 390 aa14.63□□□□□ -0.07
USH1C-201ENST00000005226 HADHQ16836 314 aaKnown RBP14.63□□□□□ -0.07
USH1C-201ENST00000005226 TTLL6Q8N841 843 aa14.63□□□□□ -0.07
USH1C-201ENST00000005226 NIPA2Q8N8Q9 360 aa14.63□□□□□ -0.07
USH1C-201ENST00000005226 SLC7A3Q8WY07 619 aa14.63□□□□□ -0.07
USH1C-201ENST00000005226 MMP19Q99542 508 aa14.63□□□□□ -0.07
USH1C-201ENST00000005226 DHX33Q9H6R0 707 aaKnown RBP14.63□□□□□ -0.07
USH1C-201ENST00000005226 LRCH1Q9Y2L9 728 aa14.63□□□□□ -0.07
USH1C-201ENST00000005226 TEX264Q9Y6I9 313 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms