RNA–Protein interactions for RNA: ENSMUST00000201711.3

Pdgfra-205, Transcript of Platelet-derived growth factor receptor alpha, mousemouse

TSL 1 (best) BASIC

Gene Pdgfra, Length 4,088 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdgfra-205ENSMUST00000201711 Tarbp2P97473 365 aa13.78□□□□□ -0.2
Pdgfra-205ENSMUST00000201711 Slc38a5Q3U1J0 479 aa13.78□□□□□ -0.2
Pdgfra-205ENSMUST00000201711 Prmt9Q3U3W5 846 aa13.78□□□□□ -0.2
Pdgfra-205ENSMUST00000201711 Ugt3a1Q3UP75 523 aa13.78□□□□□ -0.2
Pdgfra-205ENSMUST00000201711 Gm4952Q5FW57 296 aa13.78□□□□□ -0.2
Pdgfra-205ENSMUST00000201711 Trim38Q5SZ99 471 aa13.78□□□□□ -0.2
Pdgfra-205ENSMUST00000201711 Tcf4Q60722 670 aa13.78□□□□□ -0.2
Pdgfra-205ENSMUST00000201711 Cyp2c29Q64458 490 aa13.78□□□□□ -0.2
Pdgfra-205ENSMUST00000201711 Polr2eQ80UW8 210 aaKnown RBP13.78□□□□□ -0.2
Pdgfra-205ENSMUST00000201711 Trim35Q8C006 501 aa13.78□□□□□ -0.2
Pdgfra-205ENSMUST00000201711 Adamts2Q8C9W3 1213 aa13.78□□□□□ -0.2
Pdgfra-205ENSMUST00000201711 Sec14l2Q99J08 403 aa13.78□□□□□ -0.2
Pdgfra-205ENSMUST00000201711 Igf2bp3Q9CPN8 579 aaKnown RBP13.78□□□□□ -0.2
Pdgfra-205ENSMUST00000201711 Trmt10bQ9D075 318 aa13.78□□□□□ -0.2
Pdgfra-205ENSMUST00000201711 Polr3hQ9D2C6 204 aaKnown RBP13.78□□□□□ -0.2
Pdgfra-205ENSMUST00000201711 Nup98Q6PFD9 1816 aaKnown RBP13.78□□□□□ -0.2
Pdgfra-205ENSMUST00000201711 Kif13bA0A286YCV9 1847 aa13.77□□□□□ -0.2
Pdgfra-205ENSMUST00000201711 Ppargc1aO70343 797 aa13.77□□□□□ -0.2
Pdgfra-205ENSMUST00000201711 Wnt7bP28047 349 aa13.77□□□□□ -0.2
Pdgfra-205ENSMUST00000201711 Tulp2P46686 562 aa13.77□□□□□ -0.2
Pdgfra-205ENSMUST00000201711 NfiaQ02780 532 aa13.77□□□□□ -0.2
Pdgfra-205ENSMUST00000201711 Gm29609Q3UU56 907 aa13.77□□□□□ -0.2
Pdgfra-205ENSMUST00000201711 CpQ61147 1061 aa13.77□□□□□ -0.2
Pdgfra-205ENSMUST00000201711 Gtf3c2Q8BL74 907 aa13.77□□□□□ -0.2
Pdgfra-205ENSMUST00000201711 Brat1Q8C3R1 822 aa13.77□□□□□ -0.2
Pdgfra-205ENSMUST00000201711 Trim42Q9D2H5 723 aa13.77□□□□□ -0.2
Pdgfra-205ENSMUST00000201711 Neu2Q9JMH3 379 aa13.77□□□□□ -0.2
Pdgfra-205ENSMUST00000201711 Tmem59Q9QY73 323 aa13.77□□□□□ -0.2
Pdgfra-205ENSMUST00000201711 Net1Q9Z206 595 aa13.77□□□□□ -0.2
Pdgfra-205ENSMUST00000201711 Ccdc88aQ5SNZ0 1873 aa13.77□□□□□ -0.2
Pdgfra-205ENSMUST00000201711 Cfap44E9Q5M6 1843 aa13.77□□□□□ -0.2
Pdgfra-205ENSMUST00000201711 Dhx35A2ACQ1 703 aaKnown RBP13.77□□□□□ -0.21
Pdgfra-205ENSMUST00000201711 Impa1O55023 277 aa13.77□□□□□ -0.21
Pdgfra-205ENSMUST00000201711 Rdh7O88451 316 aa13.77□□□□□ -0.21
Pdgfra-205ENSMUST00000201711 Prkaa1Q5EG47 559 aa13.77□□□□□ -0.21
Pdgfra-205ENSMUST00000201711 Gcnt3Q5JCT0 437 aa13.77□□□□□ -0.21
Pdgfra-205ENSMUST00000201711 Mief2Q5NCS9 454 aa13.77□□□□□ -0.21
Pdgfra-205ENSMUST00000201711 Shroom1Q5SX79 823 aa13.77□□□□□ -0.21
Pdgfra-205ENSMUST00000201711 Fbxw2Q60584 422 aa13.77□□□□□ -0.21
Pdgfra-205ENSMUST00000201711 Olfr8Q60892 310 aa13.77□□□□□ -0.21
Pdgfra-205ENSMUST00000201711 Zdhhc24Q6IR37 284 aa13.77□□□□□ -0.21
Pdgfra-205ENSMUST00000201711 Tmem130Q6NXM3 419 aa13.77□□□□□ -0.21
Pdgfra-205ENSMUST00000201711 Cpa1Q7TPZ8 419 aa13.77□□□□□ -0.21
Pdgfra-205ENSMUST00000201711 LppQ8BFW7 613 aa13.77□□□□□ -0.21
Pdgfra-205ENSMUST00000201711 Trpa1Q8BLA8 1125 aa13.77□□□□□ -0.21
Pdgfra-205ENSMUST00000201711 RbakQ8BQC8 711 aa13.77□□□□□ -0.21
Pdgfra-205ENSMUST00000201711 Snap47Q8R570 413 aa13.77□□□□□ -0.21
Pdgfra-205ENSMUST00000201711 Bzw1Q9CQC6 419 aaKnown RBP13.77□□□□□ -0.21
Pdgfra-205ENSMUST00000201711 Tdrd12Q9CWU0 1215 aa13.77□□□□□ -0.21
Pdgfra-205ENSMUST00000201711 Rasgef1cQ9D300 466 aa13.77□□□□□ -0.21
Pdgfra-205ENSMUST00000201711 XkQ9QXY7 446 aa13.77□□□□□ -0.21
Pdgfra-205ENSMUST00000201711 Usp35M0QWN7 1009 aa13.77□□□□□ -0.21
Pdgfra-205ENSMUST00000201711 TyrobpO54885 114 aa13.77□□□□□ -0.21
Pdgfra-205ENSMUST00000201711 Atxn10P28658 475 aa13.77□□□□□ -0.21
Pdgfra-205ENSMUST00000201711 Insm1Q63ZV0 521 aa13.77□□□□□ -0.21
Pdgfra-205ENSMUST00000201711 Dnali1Q8BVN8 258 aa13.77□□□□□ -0.21
Pdgfra-205ENSMUST00000201711 Gbp5Q8CFB4 590 aa13.77□□□□□ -0.21
Pdgfra-205ENSMUST00000201711 Ccdc80Q8R2G6 949 aa13.77□□□□□ -0.21
Pdgfra-205ENSMUST00000201711 Tceal1Q921P9 165 aa13.77□□□□□ -0.21
Pdgfra-205ENSMUST00000201711 Gtf3c6Q9D8P7 227 aa13.77□□□□□ -0.21
Pdgfra-205ENSMUST00000201711 Myh13B1AR69 1938 aa13.76□□□□□ -0.21
Pdgfra-205ENSMUST00000201711 FscbA1EGX6 1074 aa13.76□□□□□ -0.21
Pdgfra-205ENSMUST00000201711 Chi3l1Q61362 389 aa13.76□□□□□ -0.21
Pdgfra-205ENSMUST00000201711 Gba2Q69ZF3 918 aa13.76□□□□□ -0.21
Pdgfra-205ENSMUST00000201711 Ppfia2Q8BSS9 1257 aa13.76□□□□□ -0.21
Pdgfra-205ENSMUST00000201711 Dclre1bQ8C7W7 541 aa13.76□□□□□ -0.21
Pdgfra-205ENSMUST00000201711 TwnkQ8CIW5 685 aa13.76□□□□□ -0.21
Pdgfra-205ENSMUST00000201711 Foxp3Q99JB6 429 aa13.76□□□□□ -0.21
Pdgfra-205ENSMUST00000201711 TfgQ9Z1A1 397 aa13.76□□□□□ -0.21
Pdgfra-205ENSMUST00000201711 Morc3F7BJB9 942 aaKnown RBP13.76□□□□□ -0.21
Pdgfra-205ENSMUST00000201711 JchainP01592 159 aa13.76□□□□□ -0.21
Pdgfra-205ENSMUST00000201711 Glud1P26443 558 aaKnown RBP13.76□□□□□ -0.21
Pdgfra-205ENSMUST00000201711 Caprin1Q60865 707 aaKnown RBP13.76□□□□□ -0.21
Pdgfra-205ENSMUST00000201711 Senp5Q6NXL6 749 aa13.76□□□□□ -0.21
Pdgfra-205ENSMUST00000201711 Lsm8Q6ZWM4 96 aaKnown RBP13.76□□□□□ -0.21
Pdgfra-205ENSMUST00000201711 Tas2r109Q7M707 316 aa13.76□□□□□ -0.21
Pdgfra-205ENSMUST00000201711 Slitrk1Q810C1 696 aa13.76□□□□□ -0.21
Pdgfra-205ENSMUST00000201711 Tarsl2Q8BLY2 790 aa13.76□□□□□ -0.21
Pdgfra-205ENSMUST00000201711 Ifi205aQ8CGE8 404 aa13.76□□□□□ -0.21
Pdgfra-205ENSMUST00000201711 HpdlQ8K248 371 aa13.76□□□□□ -0.21
Pdgfra-205ENSMUST00000201711 Abcf3Q8K268 709 aa13.76□□□□□ -0.21
Pdgfra-205ENSMUST00000201711 GldcQ91W43 1025 aa13.76□□□□□ -0.21
Pdgfra-205ENSMUST00000201711 Epn3Q91W69 636 aa13.76□□□□□ -0.21
Pdgfra-205ENSMUST00000201711 Sh2b2Q9JID9 621 aa13.76□□□□□ -0.21
Pdgfra-205ENSMUST00000201711 Nhsl1Q8CAF4 1587 aa13.76□□□□□ -0.21
Pdgfra-205ENSMUST00000201711 Olfr310B2RVZ1 332 aa13.76□□□□□ -0.21
Pdgfra-205ENSMUST00000201711 Kcna2P63141 499 aa13.76□□□□□ -0.21
Pdgfra-205ENSMUST00000201711 Ccdc138Q0VF22 680 aa13.76□□□□□ -0.21
Pdgfra-205ENSMUST00000201711 Pik3r5Q5SW28 871 aa13.76□□□□□ -0.21
Pdgfra-205ENSMUST00000201711 Nod1Q8BHB0 953 aa13.76□□□□□ -0.21
Pdgfra-205ENSMUST00000201711 Pwp2Q8BU03 919 aaKnown RBP13.76□□□□□ -0.21
Pdgfra-205ENSMUST00000201711 Camkk2Q8C078 588 aa13.76□□□□□ -0.21
Pdgfra-205ENSMUST00000201711 Olfr1352Q8VGX5 309 aa13.76□□□□□ -0.21
Pdgfra-205ENSMUST00000201711 Tex9Q9D845 387 aa13.76□□□□□ -0.21
Pdgfra-205ENSMUST00000201711 Gtf2h1Q9DBA9 547 aa13.76□□□□□ -0.21
Pdgfra-205ENSMUST00000201711 Igdcc4Q9EQS9 1252 aa13.76□□□□□ -0.21
Pdgfra-205ENSMUST00000201711 Hao1Q9WU19 370 aa13.76□□□□□ -0.21
Pdgfra-205ENSMUST00000201711 Gipc1Q9Z0G0 333 aa13.76□□□□□ -0.21
Pdgfra-205ENSMUST00000201711 Fam171a2A2A699 822 aa13.75□□□□□ -0.21
Pdgfra-205ENSMUST00000201711 Cyp2b13A6H6J2 491 aa13.75□□□□□ -0.21
Retrieved 100 of 22,080 RNA–protein pairs in 27.1 ms