RNA–Protein interactions for RNA: ENSMUST00000112298.9

Ssh1-202, Transcript of Protein phosphatase Slingshot homolog 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ssh1, Length 5,584 nt, Biotype protein coding, Subcellular localisation Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssh1-202ENSMUST00000112298 Trmt11Q9CWH5 460 aa12.86□□□□□ -0.35
Ssh1-202ENSMUST00000112298 Lrrc17Q9CXD9 443 aa12.86□□□□□ -0.35
Ssh1-202ENSMUST00000112298 Ascc1Q9D8Z1 356 aaKnown RBP12.86□□□□□ -0.35
Ssh1-202ENSMUST00000112298 Gyg1Q9R062 333 aa12.86□□□□□ -0.35
Ssh1-202ENSMUST00000112298 Arih2Q9Z1K6 492 aa12.86□□□□□ -0.35
Ssh1-202ENSMUST00000112298 Sept5Q9Z2Q6 369 aa12.86□□□□□ -0.35
Ssh1-202ENSMUST00000112298 Sbno2Q7TNB8 1349 aa12.85□□□□□ -0.35
Ssh1-202ENSMUST00000112298 Pcna-ps2A0A140T8V5 261 aa12.85□□□□□ -0.35
Ssh1-202ENSMUST00000112298 A930018M24RikB7ZMY3 218 aa12.85□□□□□ -0.35
Ssh1-202ENSMUST00000112298 Ugt1a8D3Z748 530 aa12.85□□□□□ -0.35
Ssh1-202ENSMUST00000112298 Ugt1a10E9PXN7 530 aa12.85□□□□□ -0.35
Ssh1-202ENSMUST00000112298 Atf6F6VAN0 656 aa12.85□□□□□ -0.35
Ssh1-202ENSMUST00000112298 Ap3d1O54774 1199 aa12.85□□□□□ -0.35
Ssh1-202ENSMUST00000112298 Gsta3P30115 221 aa12.85□□□□□ -0.35
Ssh1-202ENSMUST00000112298 Tmprss15P97435 1069 aa12.85□□□□□ -0.35
Ssh1-202ENSMUST00000112298 Fgfr4Q03142 799 aa12.85□□□□□ -0.35
Ssh1-202ENSMUST00000112298 Togaram2Q3TYG6 1002 aa12.85□□□□□ -0.35
Ssh1-202ENSMUST00000112298 Ndufaf2Q59J78 168 aa12.85□□□□□ -0.35
Ssh1-202ENSMUST00000112298 Ksr1Q61097 873 aa12.85□□□□□ -0.35
Ssh1-202ENSMUST00000112298 Plk4Q64702 925 aa12.85□□□□□ -0.35
Ssh1-202ENSMUST00000112298 Ntrk3Q6VNS1 825 aa12.85□□□□□ -0.35
Ssh1-202ENSMUST00000112298 Celf6Q7TN33 460 aaKnown RBP12.85□□□□□ -0.35
Ssh1-202ENSMUST00000112298 Mrgprb8Q7TN51 330 aa12.85□□□□□ -0.35
Ssh1-202ENSMUST00000112298 Prkaa2Q8BRK8 552 aa12.85□□□□□ -0.35
Ssh1-202ENSMUST00000112298 Ccdc134Q8C7V8 229 aa12.85□□□□□ -0.35
Ssh1-202ENSMUST00000112298 Sugp1Q8CH02 643 aaKnown RBP12.85□□□□□ -0.35
Ssh1-202ENSMUST00000112298 Nox1Q8CIZ9 591 aa12.85□□□□□ -0.35
Ssh1-202ENSMUST00000112298 Tdrd3Q91W18 743 aaKnown RBP12.85□□□□□ -0.35
Ssh1-202ENSMUST00000112298 Kcnd2Q9Z0V2 630 aa12.85□□□□□ -0.35
Ssh1-202ENSMUST00000112298 XdhQ00519 1335 aa12.85□□□□□ -0.35
Ssh1-202ENSMUST00000112298 Kctd14A0A0U1RNG7 287 aa12.85□□□□□ -0.35
Ssh1-202ENSMUST00000112298 Skint11A7XV14 364 aa12.85□□□□□ -0.35
Ssh1-202ENSMUST00000112298 BhmtO35490 407 aaKnown RBP12.85□□□□□ -0.35
Ssh1-202ENSMUST00000112298 LtbrP50284 415 aa12.85□□□□□ -0.35
Ssh1-202ENSMUST00000112298 RubcnlQ3TD16 648 aa12.85□□□□□ -0.35
Ssh1-202ENSMUST00000112298 Man1c1Q6NXK9 625 aa12.85□□□□□ -0.35
Ssh1-202ENSMUST00000112298 Sgo2Q7TSY8 1164 aa12.85□□□□□ -0.35
Ssh1-202ENSMUST00000112298 Chchd6Q91VN4 273 aa12.85□□□□□ -0.35
Ssh1-202ENSMUST00000112298 Tmem59Q9QY73 323 aa12.85□□□□□ -0.35
Ssh1-202ENSMUST00000112298 Ruvbl2Q9WTM5 463 aaKnown RBP12.85□□□□□ -0.35
Ssh1-202ENSMUST00000112298 Dip2aQ8BWT5 1523 aa12.85□□□□□ -0.35
Ssh1-202ENSMUST00000112298 EloblA6PWE0 161 aa12.85□□□□□ -0.35
Ssh1-202ENSMUST00000112298 Tgm2P21981 686 aaKnown RBP12.85□□□□□ -0.35
Ssh1-202ENSMUST00000112298 Tmem109Q3UBX0 243 aa12.85□□□□□ -0.35
Ssh1-202ENSMUST00000112298 Tssk1bQ61241 365 aa12.85□□□□□ -0.35
Ssh1-202ENSMUST00000112298 Pde1aQ61481 565 aa12.85□□□□□ -0.35
Ssh1-202ENSMUST00000112298 Olfr392Q7TRX6 312 aa12.85□□□□□ -0.35
Ssh1-202ENSMUST00000112298 Rmdn2Q8BSE0 410 aa12.85□□□□□ -0.35
Ssh1-202ENSMUST00000112298 Q8CC96 669 aa12.85□□□□□ -0.35
Ssh1-202ENSMUST00000112298 OgtQ8CGY8 1046 aa12.85□□□□□ -0.35
Ssh1-202ENSMUST00000112298 Pnma3Q8JZW8 466 aa12.85□□□□□ -0.35
Ssh1-202ENSMUST00000112298 Gm5415E9PXF3 478 aa12.85□□□□□ -0.35
Ssh1-202ENSMUST00000112298 D830030K20RikE9PYQ5 218 aa12.85□□□□□ -0.35
Ssh1-202ENSMUST00000112298 Gm3043K7N693 218 aa12.85□□□□□ -0.35
Ssh1-202ENSMUST00000112298 Gm16440K7N6G6 218 aa12.85□□□□□ -0.35
Ssh1-202ENSMUST00000112298 Gm2244L7N2A3 218 aa12.85□□□□□ -0.35
Ssh1-202ENSMUST00000112298 Gm3278L7N2D2 218 aa12.85□□□□□ -0.35
Ssh1-202ENSMUST00000112298 Gm8271L7N2E2 218 aa12.85□□□□□ -0.35
Ssh1-202ENSMUST00000112298 Nedd1P33215 660 aa12.85□□□□□ -0.35
Ssh1-202ENSMUST00000112298 Olfr8Q60892 310 aa12.85□□□□□ -0.35
Ssh1-202ENSMUST00000112298 Mrps31Q61733 384 aaKnown RBP12.85□□□□□ -0.35
Ssh1-202ENSMUST00000112298 Teddm1aQ810U2 305 aa12.85□□□□□ -0.35
Ssh1-202ENSMUST00000112298 Smyd2Q8R5A0 433 aa12.85□□□□□ -0.35
Ssh1-202ENSMUST00000112298 Rxfp2Q91ZZ5 737 aa12.85□□□□□ -0.35
Ssh1-202ENSMUST00000112298 Nkd1Q99MH6 471 aa12.85□□□□□ -0.35
Ssh1-202ENSMUST00000112298 Hspa12bQ9CZJ2 685 aa12.85□□□□□ -0.35
Ssh1-202ENSMUST00000112298 Polr3hQ9D2C6 204 aaKnown RBP12.85□□□□□ -0.35
Ssh1-202ENSMUST00000112298 Znf654Q9DAU9 571 aa12.85□□□□□ -0.35
Ssh1-202ENSMUST00000112298 Gm8237E9Q257 205 aa12.84□□□□□ -0.35
Ssh1-202ENSMUST00000112298 Zfp277E9Q6D6 583 aaKnown RBP12.84□□□□□ -0.35
Ssh1-202ENSMUST00000112298 Rfpl4bJ3QPR6 266 aa12.84□□□□□ -0.35
Ssh1-202ENSMUST00000112298 CenpaO35216 134 aa12.84□□□□□ -0.35
Ssh1-202ENSMUST00000112298 Meis3P97368 378 aa12.84□□□□□ -0.35
Ssh1-202ENSMUST00000112298 Ica1lQ3TY65 431 aa12.84□□□□□ -0.35
Ssh1-202ENSMUST00000112298 Adrbk2Q3UYH7 688 aa12.84□□□□□ -0.35
Ssh1-202ENSMUST00000112298 Zfp90Q61967 636 aa12.84□□□□□ -0.35
Ssh1-202ENSMUST00000112298 TbcelQ8C5W3 424 aa12.84□□□□□ -0.35
Ssh1-202ENSMUST00000112298 PmpcbQ9CXT8 489 aa12.84□□□□□ -0.35
Ssh1-202ENSMUST00000112298 Batf3Q9D275 118 aa12.84□□□□□ -0.35
Ssh1-202ENSMUST00000112298 Ttc23lA6H6E9 458 aa12.84□□□□□ -0.35
Ssh1-202ENSMUST00000112298 Krt6aP50446 553 aa12.84□□□□□ -0.35
Ssh1-202ENSMUST00000112298 Rnaseh2bQ80ZV0 308 aa12.84□□□□□ -0.35
Ssh1-202ENSMUST00000112298 Pi4kbQ8BKC8 816 aa12.84□□□□□ -0.35
Ssh1-202ENSMUST00000112298 Gtf2a1lQ8R4I4 468 aa12.84□□□□□ -0.35
Ssh1-202ENSMUST00000112298 Gtf2h3Q8VD76 309 aa12.84□□□□□ -0.35
Ssh1-202ENSMUST00000112298 Mta3Q924K8 591 aa12.84□□□□□ -0.35
Ssh1-202ENSMUST00000112298 CenpsQ9D084 142 aa12.84□□□□□ -0.35
Ssh1-202ENSMUST00000112298 Cyp3a44Q9EQW4 504 aa12.84□□□□□ -0.35
Ssh1-202ENSMUST00000112298 Erich1E9PY43 332 aa12.84□□□□□ -0.35
Ssh1-202ENSMUST00000112298 Gm5134E9QAB5 671 aa12.84□□□□□ -0.35
Ssh1-202ENSMUST00000112298 SprtnG3X912 497 aa12.84□□□□□ -0.35
Ssh1-202ENSMUST00000112298 Klf6O08584 283 aa12.84□□□□□ -0.35
Ssh1-202ENSMUST00000112298 Stx7O70439 261 aa12.84□□□□□ -0.35
Ssh1-202ENSMUST00000112298 Mageb5Q14AN0 366 aa12.84□□□□□ -0.35
Ssh1-202ENSMUST00000112298 Mrps26Q80ZS3 200 aa12.84□□□□□ -0.35
Ssh1-202ENSMUST00000112298 Dusp19Q8K4T5 220 aa12.84□□□□□ -0.35
Ssh1-202ENSMUST00000112298 Ccdc59Q8R2N0 240 aaKnown RBP12.84□□□□□ -0.35
Ssh1-202ENSMUST00000112298 Dpp3Q99KK7 738 aa12.84□□□□□ -0.35
Ssh1-202ENSMUST00000112298 CoprsQ9CQ13 173 aa12.84□□□□□ -0.35
Ssh1-202ENSMUST00000112298 Cep72Q9D3R3 646 aa12.84□□□□□ -0.35
Retrieved 100 of 22,080 RNA–protein pairs in 24.8 ms