RNA–Protein interactions for RNA: ENSMUST00000088349.2

Col9a1-202, Transcript of Collagen alpha-1(IX) chain, mousemouse

TSL 1 (best) BASIC

Gene Col9a1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1-202ENSMUST00000088349 Gata5P97489 404 aa12.05□□□□□ -0.48
Col9a1-202ENSMUST00000088349 Map3k7Q62073 579 aa12.05□□□□□ -0.48
Col9a1-202ENSMUST00000088349 Rab34Q64008 259 aa12.05□□□□□ -0.48
Col9a1-202ENSMUST00000088349 Cyp3a16Q64481 504 aa12.05□□□□□ -0.48
Col9a1-202ENSMUST00000088349 N4bp1Q6A037 893 aa12.05□□□□□ -0.48
Col9a1-202ENSMUST00000088349 Prpf31Q8CCF0 499 aaKnown RBP12.05□□□□□ -0.48
Col9a1-202ENSMUST00000088349 Zfp263Q8CF60 680 aa12.05□□□□□ -0.48
Col9a1-202ENSMUST00000088349 Kat14Q8CID0 779 aa12.05□□□□□ -0.48
Col9a1-202ENSMUST00000088349 Lin7aQ8JZS0 233 aa12.05□□□□□ -0.48
Col9a1-202ENSMUST00000088349 SncaipQ99ME3 962 aa12.05□□□□□ -0.48
Col9a1-202ENSMUST00000088349 Cntnap4Q99P47 1310 aa12.05□□□□□ -0.48
Col9a1-202ENSMUST00000088349 Nudt8Q9CR24 210 aa12.05□□□□□ -0.48
Col9a1-202ENSMUST00000088349 Castor1Q9CWQ8 331 aa12.05□□□□□ -0.48
Col9a1-202ENSMUST00000088349 Rmi1Q9D4G9 616 aa12.05□□□□□ -0.48
Col9a1-202ENSMUST00000088349 DcpsQ9DAR7 338 aa12.05□□□□□ -0.48
Col9a1-202ENSMUST00000088349 Chrac1Q9JKP8 129 aa12.05□□□□□ -0.48
Col9a1-202ENSMUST00000088349 B4galt5Q9JMK0 388 aa12.05□□□□□ -0.48
Col9a1-202ENSMUST00000088349 B3galt4Q9Z0F0 371 aa12.05□□□□□ -0.48
Col9a1-202ENSMUST00000088349 4931406B18RikA2RSL7 367 aa12.05□□□□□ -0.48
Col9a1-202ENSMUST00000088349 Kbtbd2G3X9X1 623 aa12.05□□□□□ -0.48
Col9a1-202ENSMUST00000088349 Per2O54943 1257 aa12.05□□□□□ -0.48
Col9a1-202ENSMUST00000088349 Cbx2P30658 519 aa12.05□□□□□ -0.48
Col9a1-202ENSMUST00000088349 HalP35492 657 aa12.05□□□□□ -0.48
Col9a1-202ENSMUST00000088349 Adamts10P58459 1104 aa12.05□□□□□ -0.48
Col9a1-202ENSMUST00000088349 Ubxn2bQ0KL01 331 aa12.05□□□□□ -0.48
Col9a1-202ENSMUST00000088349 Tars2Q3UQ84 723 aaKnown RBP12.05□□□□□ -0.48
Col9a1-202ENSMUST00000088349 Tmprss11eQ5S248 423 aa12.05□□□□□ -0.48
Col9a1-202ENSMUST00000088349 Samhd1Q60710 627 aa12.05□□□□□ -0.48
Col9a1-202ENSMUST00000088349 Arhgap20Q6IFT4 1182 aa12.05□□□□□ -0.48
Col9a1-202ENSMUST00000088349 Olfr670Q7TRP3 312 aa12.05□□□□□ -0.48
Col9a1-202ENSMUST00000088349 Ccdc68Q8BVC4 333 aa12.05□□□□□ -0.48
Col9a1-202ENSMUST00000088349 Uba3Q8C878 462 aa12.05□□□□□ -0.48
Col9a1-202ENSMUST00000088349 Stau2Q8CJ67 570 aaKnown RBP12.05□□□□□ -0.48
Col9a1-202ENSMUST00000088349 Ascc2Q91WR3 749 aa12.05□□□□□ -0.48
Col9a1-202ENSMUST00000088349 Rilpl2Q99LE1 197 aa12.05□□□□□ -0.48
Col9a1-202ENSMUST00000088349 Zfp623Q9CY99 499 aa12.05□□□□□ -0.48
Col9a1-202ENSMUST00000088349 Mtmr1Q9Z2C4 669 aa12.05□□□□□ -0.48
Col9a1-202ENSMUST00000088349 Mbd1Q9Z2E2 636 aa12.05□□□□□ -0.48
Col9a1-202ENSMUST00000088349 Ccnyl1D3YUJ3 367 aa12.05□□□□□ -0.48
Col9a1-202ENSMUST00000088349 Gm3371F7CQW8 167 aa12.05□□□□□ -0.48
Col9a1-202ENSMUST00000088349 Has3O08650 554 aa12.05□□□□□ -0.48
Col9a1-202ENSMUST00000088349 Nek2O35942 443 aa12.05□□□□□ -0.48
Col9a1-202ENSMUST00000088349 Dnase1l3O55070 310 aa12.05□□□□□ -0.48
Col9a1-202ENSMUST00000088349 AlplP09242 524 aa12.05□□□□□ -0.48
Col9a1-202ENSMUST00000088349 L1camP11627 1260 aa12.05□□□□□ -0.48
Col9a1-202ENSMUST00000088349 Alkbh5Q3TSG4 395 aaKnown RBP12.05□□□□□ -0.48
Col9a1-202ENSMUST00000088349 Otud5Q3U2S4 566 aa12.05□□□□□ -0.48
Col9a1-202ENSMUST00000088349 Prkaa1Q5EG47 559 aa12.05□□□□□ -0.48
Col9a1-202ENSMUST00000088349 Rbl2Q64700 1135 aa12.05□□□□□ -0.48
Col9a1-202ENSMUST00000088349 Eif2aQ8BJW6 581 aaKnown RBP12.05□□□□□ -0.48
Col9a1-202ENSMUST00000088349 Phka2Q8BWJ3 1235 aa12.05□□□□□ -0.48
Col9a1-202ENSMUST00000088349 Syt15Q8C6N3 418 aa12.05□□□□□ -0.48
Col9a1-202ENSMUST00000088349 Glis2Q8VDL9 521 aa12.05□□□□□ -0.48
Col9a1-202ENSMUST00000088349 Rassf3Q99P51 232 aa12.05□□□□□ -0.48
Col9a1-202ENSMUST00000088349 Lilra5D3Z7A9 295 aa12.04□□□□□ -0.48
Col9a1-202ENSMUST00000088349 Apold1E9Q0X2 246 aa12.04□□□□□ -0.48
Col9a1-202ENSMUST00000088349 Gm5689F6Y2A6 97 aa12.04□□□□□ -0.48
Col9a1-202ENSMUST00000088349 Morc3F7BJB9 942 aaKnown RBP12.04□□□□□ -0.48
Col9a1-202ENSMUST00000088349 Axin1O35625 863 aa12.04□□□□□ -0.48
Col9a1-202ENSMUST00000088349 Magea6O89010 325 aa12.04□□□□□ -0.48
Col9a1-202ENSMUST00000088349 Fen1P39749 378 aa12.04□□□□□ -0.48
Col9a1-202ENSMUST00000088349 Ndufs6P52503 116 aa12.04□□□□□ -0.48
Col9a1-202ENSMUST00000088349 Arid5aQ3U108 590 aa12.04□□□□□ -0.48
Col9a1-202ENSMUST00000088349 PapolaQ61183 739 aa12.04□□□□□ -0.48
Col9a1-202ENSMUST00000088349 Nudt16Q6P3D0 195 aa12.04□□□□□ -0.48
Col9a1-202ENSMUST00000088349 Azin2Q8BVM4 459 aa12.04□□□□□ -0.48
Col9a1-202ENSMUST00000088349 Phactr3Q8BYK5 558 aa12.04□□□□□ -0.48
Col9a1-202ENSMUST00000088349 Ccser1Q8C0C4 895 aa12.04□□□□□ -0.48
Col9a1-202ENSMUST00000088349 Clip4Q8CI96 704 aa12.04□□□□□ -0.48
Col9a1-202ENSMUST00000088349 Acvr1cQ8K348 493 aa12.04□□□□□ -0.48
Col9a1-202ENSMUST00000088349 Dync1li1Q8R1Q8 523 aa12.04□□□□□ -0.48
Col9a1-202ENSMUST00000088349 Alg9Q8VDI9 611 aa12.04□□□□□ -0.48
Col9a1-202ENSMUST00000088349 Pcdha3Q91Y16 942 aa12.04□□□□□ -0.48
Col9a1-202ENSMUST00000088349 TfQ921I1 697 aa12.04□□□□□ -0.48
Col9a1-202ENSMUST00000088349 4933428M09RikQ9D3X3 192 aa12.04□□□□□ -0.48
Col9a1-202ENSMUST00000088349 Trpc2Q9R244 1172 aa12.04□□□□□ -0.48
Col9a1-202ENSMUST00000088349 Vmn2r25W4VSP2 855 aa12.04□□□□□ -0.48
Col9a1-202ENSMUST00000088349 Zswim8Q3UHH1 1832 aaKnown RBP12.04□□□□□ -0.48
Col9a1-202ENSMUST00000088349 Serpinb3cA2RSF9 386 aa12.04□□□□□ -0.48
Col9a1-202ENSMUST00000088349 Smok3aC0HKC8 504 aa12.04□□□□□ -0.48
Col9a1-202ENSMUST00000088349 Smok3bC0HKC9 504 aa12.04□□□□□ -0.48
Col9a1-202ENSMUST00000088349 Mov10P23249 1004 aaKnown RBP12.04□□□□□ -0.48
Col9a1-202ENSMUST00000088349 RalgdsQ03385 852 aa12.04□□□□□ -0.48
Col9a1-202ENSMUST00000088349 Prmt9Q3U3W5 846 aa12.04□□□□□ -0.48
Col9a1-202ENSMUST00000088349 Fam102aQ78T81 392 aa12.04□□□□□ -0.48
Col9a1-202ENSMUST00000088349 Wdr35Q8BND3 1181 aa12.04□□□□□ -0.48
Col9a1-202ENSMUST00000088349 Hsdl1Q8BTX9 330 aa12.04□□□□□ -0.48
Col9a1-202ENSMUST00000088349 Tmem132cQ8CEF9 1099 aa12.04□□□□□ -0.48
Col9a1-202ENSMUST00000088349 Adgrg2Q8CJ12 1009 aa12.04□□□□□ -0.48
Col9a1-202ENSMUST00000088349 Coq6Q8R1S0 476 aa12.04□□□□□ -0.48
Col9a1-202ENSMUST00000088349 Caap1Q8VDY9 356 aa12.04□□□□□ -0.48
Col9a1-202ENSMUST00000088349 Tceal1Q921P9 165 aa12.04□□□□□ -0.48
Col9a1-202ENSMUST00000088349 Me2Q99KE1 589 aa12.04□□□□□ -0.48
Col9a1-202ENSMUST00000088349 Tas1r1Q99PG6 842 aa12.04□□□□□ -0.48
Col9a1-202ENSMUST00000088349 Adgrf4Q9D2L6 698 aa12.04□□□□□ -0.48
Col9a1-202ENSMUST00000088349 Cntn6Q9JMB8 1028 aa12.04□□□□□ -0.48
Col9a1-202ENSMUST00000088349 Ptpn4Q9WU22 926 aa12.04□□□□□ -0.48
Col9a1-202ENSMUST00000088349 Ror1Q9Z139 937 aa12.04□□□□□ -0.48
Col9a1-202ENSMUST00000088349 Robo3Q9Z2I4 1366 aa12.03□□□□□ -0.48
Col9a1-202ENSMUST00000088349 StrcQ8VIM6 1809 aa12.03□□□□□ -0.48
Retrieved 100 of 22,080 RNA–protein pairs in 30.3 ms