RNA–Protein interactions for RNA: ENSMUST00000054384.5

Trim56-201, Transcript of E3 ubiquitin-protein ligase TRIM56, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim56, Length 9,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56-201ENSMUST00000054384 Tmtc3Q8BRH0 920 aa12.34□□□□□ -0.43
Trim56-201ENSMUST00000054384 Hars2Q99KK9 505 aa12.34□□□□□ -0.43
Trim56-201ENSMUST00000054384 Echdc3Q9D7J9 300 aa12.34□□□□□ -0.43
Trim56-201ENSMUST00000054384 Serpini2Q9JK88 405 aa12.34□□□□□ -0.43
Trim56-201ENSMUST00000054384 Hmgxb4Q80Y32 594 aaKnown RBP12.33□□□□□ -0.43
Trim56-201ENSMUST00000054384 GabrqQ9JLF1 638 aa12.33□□□□□ -0.43
Trim56-201ENSMUST00000054384 Simc1E9Q6E9 1354 aa12.33□□□□□ -0.43
Trim56-201ENSMUST00000054384 Fam205aA2APU8 1308 aa12.33□□□□□ -0.44
Trim56-201ENSMUST00000054384 Pds5aQ6A026 1332 aa12.33□□□□□ -0.44
Trim56-201ENSMUST00000054384 Olfr414E9Q5P8 317 aa12.33□□□□□ -0.44
Trim56-201ENSMUST00000054384 Rhox12Q4TU81 186 aa12.33□□□□□ -0.44
Trim56-201ENSMUST00000054384 Cep78Q6IRU7 790 aa12.33□□□□□ -0.44
Trim56-201ENSMUST00000054384 Ruvbl2Q9WTM5 463 aaKnown RBP12.33□□□□□ -0.44
Trim56-201ENSMUST00000054384 Zscan4-ps1A0A1C7CYV3 506 aa12.33□□□□□ -0.44
Trim56-201ENSMUST00000054384 Zscan4dA7KBS4 506 aa12.33□□□□□ -0.44
Trim56-201ENSMUST00000054384 Zscan4fQ3URS2 506 aa12.33□□□□□ -0.44
Trim56-201ENSMUST00000054384 C1orf109Q499E6 217 aa12.33□□□□□ -0.44
Trim56-201ENSMUST00000054384 Rnf139Q7TMV1 668 aa12.33□□□□□ -0.44
Trim56-201ENSMUST00000054384 Fam185aQ7TPD2 378 aa12.33□□□□□ -0.44
Trim56-201ENSMUST00000054384 Zscan4cQ80VJ6 506 aa12.33□□□□□ -0.44
Trim56-201ENSMUST00000054384 Gramd1aQ8VEF1 722 aa12.33□□□□□ -0.44
Trim56-201ENSMUST00000054384 BrdtQ91Y44 956 aa12.33□□□□□ -0.44
Trim56-201ENSMUST00000054384 1700129C05RikQ9CQ77 218 aa12.33□□□□□ -0.44
Trim56-201ENSMUST00000054384 Cyp2s1Q9DBX6 501 aa12.33□□□□□ -0.44
Trim56-201ENSMUST00000054384 Pole2O54956 527 aa12.33□□□□□ -0.44
Trim56-201ENSMUST00000054384 Smndc1Q8BGT7 238 aaKnown RBP12.33□□□□□ -0.44
Trim56-201ENSMUST00000054384 Mical2Q8BML1 960 aa12.33□□□□□ -0.44
Trim56-201ENSMUST00000054384 Gm8011K7N6Y5 207 aa12.33□□□□□ -0.44
Trim56-201ENSMUST00000054384 SykP48025 629 aa12.33□□□□□ -0.44
Trim56-201ENSMUST00000054384 Csnk2bP67871 215 aaKnown RBP12.33□□□□□ -0.44
Trim56-201ENSMUST00000054384 Tnni3kQ5GIG6 834 aa12.33□□□□□ -0.44
Trim56-201ENSMUST00000054384 Casc4Q6P2L7 435 aa12.33□□□□□ -0.44
Trim56-201ENSMUST00000054384 Rps6ka6Q7TPS0 764 aa12.33□□□□□ -0.44
Trim56-201ENSMUST00000054384 Klhl24Q8BRG6 600 aa12.33□□□□□ -0.44
Trim56-201ENSMUST00000054384 Tbl3Q8C4J7 801 aaKnown RBP12.33□□□□□ -0.44
Trim56-201ENSMUST00000054384 Stap2Q8R0L1 411 aa12.33□□□□□ -0.44
Trim56-201ENSMUST00000054384 Q9CQF4 240 aa12.33□□□□□ -0.44
Trim56-201ENSMUST00000054384 Gpatch1Q9DBM1 930 aa12.33□□□□□ -0.44
Trim56-201ENSMUST00000054384 Tm9sf1Q9DBU0 606 aa12.33□□□□□ -0.44
Trim56-201ENSMUST00000054384 PgdQ9DCD0 483 aa12.33□□□□□ -0.44
Trim56-201ENSMUST00000054384 YwhazP63101 245 aaKnown RBP12.33□□□□□ -0.44
Trim56-201ENSMUST00000054384 Capn11Q6J756 714 aa12.33□□□□□ -0.44
Trim56-201ENSMUST00000054384 Btnl1Q7TST0 509 aa12.33□□□□□ -0.44
Trim56-201ENSMUST00000054384 Znf579Q80VM4 562 aa12.33□□□□□ -0.44
Trim56-201ENSMUST00000054384 Slitrk1Q810C1 696 aa12.33□□□□□ -0.44
Trim56-201ENSMUST00000054384 Epsti1Q8VDI1 314 aa12.33□□□□□ -0.44
Trim56-201ENSMUST00000054384 Pcdhgb4Q91XX6 912 aa12.33□□□□□ -0.44
Trim56-201ENSMUST00000054384 Trap1Q9CQN1 706 aaKnown RBP12.33□□□□□ -0.44
Trim56-201ENSMUST00000054384 Mis18aQ9CZJ6 204 aa12.33□□□□□ -0.44
Trim56-201ENSMUST00000054384 Wdr12Q9JJA4 423 aa12.33□□□□□ -0.44
Trim56-201ENSMUST00000054384 Hs6st1Q9QYK5 411 aa12.33□□□□□ -0.44
Trim56-201ENSMUST00000054384 Adcy6Q01341 1165 aa12.33□□□□□ -0.44
Trim56-201ENSMUST00000054384 Esyt3Q5DTI8 891 aa12.33□□□□□ -0.44
Trim56-201ENSMUST00000054384 Coq8aQ60936 645 aa12.33□□□□□ -0.44
Trim56-201ENSMUST00000054384 Lrrn2Q6PHP6 730 aa12.33□□□□□ -0.44
Trim56-201ENSMUST00000054384 Pkn2Q8BWW9 983 aa12.33□□□□□ -0.44
Trim56-201ENSMUST00000054384 Akr1c20Q8VC77 323 aa12.33□□□□□ -0.44
Trim56-201ENSMUST00000054384 Rev1Q920Q2 1249 aa12.33□□□□□ -0.44
Trim56-201ENSMUST00000054384 Pcyox1Q9CQF9 505 aa12.33□□□□□ -0.44
Trim56-201ENSMUST00000054384 Mrpl2Q9D773 306 aaKnown RBP12.33□□□□□ -0.44
Trim56-201ENSMUST00000054384 Dgcr8Q9EQM6 773 aa12.33□□□□□ -0.44
Trim56-201ENSMUST00000054384 Olfr121Q5CZY0 321 aa12.33□□□□□ -0.44
Trim56-201ENSMUST00000054384 Olfr8Q60892 310 aa12.33□□□□□ -0.44
Trim56-201ENSMUST00000054384 Gja6Q6S5G4 283 aa12.33□□□□□ -0.44
Trim56-201ENSMUST00000054384 Mmgt1Q8K273 131 aaKnown RBP12.33□□□□□ -0.44
Trim56-201ENSMUST00000054384 Fam151aQ8QZW3 608 aa12.33□□□□□ -0.44
Trim56-201ENSMUST00000054384 Scgb2b20Q9JI02 112 aa12.33□□□□□ -0.44
Trim56-201ENSMUST00000054384 TecP24604 630 aa12.32□□□□□ -0.44
Trim56-201ENSMUST00000054384 Pkn1P70268 946 aa12.32□□□□□ -0.44
Trim56-201ENSMUST00000054384 Sephs2P97364 452 aa12.32□□□□□ -0.44
Trim56-201ENSMUST00000054384 Tex13c3Q810P0 219 aa12.32□□□□□ -0.44
Trim56-201ENSMUST00000054384 CherpQ8CGZ0 936 aaKnown RBP12.32□□□□□ -0.44
Trim56-201ENSMUST00000054384 Ascc1Q9D8Z1 356 aaKnown RBP12.32□□□□□ -0.44
Trim56-201ENSMUST00000054384 ZfrO88532 1074 aaKnown RBP12.32□□□□□ -0.44
Trim56-201ENSMUST00000054384 Phactr1Q2M3X8 580 aa12.32□□□□□ -0.44
Trim56-201ENSMUST00000054384 Trim63Q38HM4 350 aa12.32□□□□□ -0.44
Trim56-201ENSMUST00000054384 Q8CC96 669 aa12.32□□□□□ -0.44
Trim56-201ENSMUST00000054384 Kdm4bQ91VY5 1086 aa12.32□□□□□ -0.44
Trim56-201ENSMUST00000054384 Exo5Q9CXP9 373 aa12.32□□□□□ -0.44
Trim56-201ENSMUST00000054384 Uts2Q9QZQ3 123 aa12.32□□□□□ -0.44
Trim56-201ENSMUST00000054384 Gm5160F8VPN3 147 aa12.32□□□□□ -0.44
Trim56-201ENSMUST00000054384 GclmO09172 274 aaKnown RBP12.32□□□□□ -0.44
Trim56-201ENSMUST00000054384 Cdc25cP48967 447 aa12.32□□□□□ -0.44
Trim56-201ENSMUST00000054384 Chsy1Q6ZQ11 800 aa12.32□□□□□ -0.44
Trim56-201ENSMUST00000054384 Znf622Q91VY9 476 aa12.32□□□□□ -0.44
Trim56-201ENSMUST00000054384 AlbP07724 608 aa12.32□□□□□ -0.44
Trim56-201ENSMUST00000054384 DselQ0VBN2 1207 aa12.32□□□□□ -0.44
Trim56-201ENSMUST00000054384 Ms4a5Q810P8 197 aa12.32□□□□□ -0.44
Trim56-201ENSMUST00000054384 Luzp2Q8BGY3 345 aa12.32□□□□□ -0.44
Trim56-201ENSMUST00000054384 Mill1Q8HWE7 395 aa12.32□□□□□ -0.44
Trim56-201ENSMUST00000054384 N4bp2l2Q8JZS6 575 aa12.32□□□□□ -0.44
Trim56-201ENSMUST00000054384 Cox18Q8VC74 331 aa12.32□□□□□ -0.44
Trim56-201ENSMUST00000054384 Yipf1Q91VU1 306 aa12.32□□□□□ -0.44
Trim56-201ENSMUST00000054384 Atp6v1c1Q9Z1G3 382 aa12.32□□□□□ -0.44
Trim56-201ENSMUST00000054384 Mtco1P00397 514 aa12.32□□□□□ -0.44
Trim56-201ENSMUST00000054384 PrkceP16054 737 aa12.32□□□□□ -0.44
Trim56-201ENSMUST00000054384 CtshP49935 333 aa12.32□□□□□ -0.44
Trim56-201ENSMUST00000054384 Slc35g1Q8BY79 368 aa12.32□□□□□ -0.44
Trim56-201ENSMUST00000054384 GrapQ9CX99 217 aa12.32□□□□□ -0.44
Trim56-201ENSMUST00000054384 1700123K08RikQ9D991 295 aa12.32□□□□□ -0.44
Retrieved 100 of 22,080 RNA–protein pairs in 184 ms