RNA–Protein interactions for RNA: ENSMUST00000004430.13

Clcn3-201, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 4,175 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-201ENSMUST00000004430 Pcdh9F8VPK8 1237 aa13.23□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Cd72P21855 354 aa13.23□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Ugt1a1Q63886 535 aa13.23□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Fastkd1Q6DI86 829 aa13.23□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Glra2Q7TNC8 452 aa13.23□□□□□ -0.29
Clcn3-201ENSMUST00000004430 CopaQ8CIE6 1224 aaKnown RBP13.23□□□□□ -0.29
Clcn3-201ENSMUST00000004430 UvragQ8K245 698 aa13.23□□□□□ -0.29
Clcn3-201ENSMUST00000004430 PhykplQ8R1K4 467 aa13.23□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Spns2Q91VM4 549 aa13.23□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Neu2Q9JMH3 379 aa13.23□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Trpc4Q9QUQ5 974 aa13.23□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Rbck1Q9WUB0 508 aa13.23□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Morc3F7BJB9 942 aaKnown RBP13.23□□□□□ -0.29
Clcn3-201ENSMUST00000004430 CtshP49935 333 aa13.23□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Polr1bP70700 1135 aa13.23□□□□□ -0.29
Clcn3-201ENSMUST00000004430 RalgdsQ03385 852 aa13.23□□□□□ -0.29
Clcn3-201ENSMUST00000004430 P2rx5Q3UYI1 455 aa13.23□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Spdye4aQ5IBH6 268 aa13.23□□□□□ -0.29
Clcn3-201ENSMUST00000004430 WlsQ6DID7 541 aa13.23□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Psd2Q6P1I6 770 aa13.23□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Nemp1Q6ZQE4 437 aa13.23□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Fcho1Q8K285 873 aa13.23□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Caap1Q8VDY9 356 aa13.23□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Olfr1499Q8VG65 314 aa13.23□□□□□ -0.29
Clcn3-201ENSMUST00000004430 PudpQ9D5U5 234 aa13.23□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Lima1Q9ERG0 753 aaKnown RBP13.23□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Trim54Q9ERP3 366 aa13.23□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Prmt2Q9R144 448 aa13.23□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Arfgef1G3X9K3 1846 aaKnown RBP13.23□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Plcg1Q62077 1302 aa13.23□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Abcb11Q9QY30 1321 aa13.23□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Myh13B1AR69 1938 aa13.23□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Smok3aC0HKC8 504 aa13.23□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Smok3bC0HKC9 504 aa13.23□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Ces1cP23953 554 aa13.23□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Hddc2Q3SXD3 199 aa13.23□□□□□ -0.29
Clcn3-201ENSMUST00000004430 4933427I04RikQ3V053 235 aa13.23□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Best3Q6H1V1 669 aa13.23□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Klhl2Q8JZP3 593 aa13.23□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Znf445Q8R2V3 986 aa13.23□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Guca1bQ8VBV8 201 aa13.23□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Dnajc9Q91WN1 259 aaKnown RBP13.23□□□□□ -0.29
Clcn3-201ENSMUST00000004430 HlcsQ920N2 722 aa13.23□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Nek2O35942 443 aa13.22□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Pitpnm1O35954 1243 aa13.22□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Shoc2O88520 582 aaKnown RBP13.22□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Il2P04351 169 aa13.22□□□□□ -0.29
Clcn3-201ENSMUST00000004430 GsnP13020 780 aa13.22□□□□□ -0.29
Clcn3-201ENSMUST00000004430 EporP14753 507 aa13.22□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Rpl22P67984 128 aaKnown RBP13.22□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Ccndbp1Q3TVC7 356 aa13.22□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Gcnt3Q5JCT0 437 aa13.22□□□□□ -0.29
Clcn3-201ENSMUST00000004430 PighQ5M9N4 188 aa13.22□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Parp6Q6P6P7 630 aa13.22□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Gxylt2Q810K9 444 aa13.22□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Zfp120Q8BZW4 436 aa13.22□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Trim16Q99PP9 556 aa13.22□□□□□ -0.29
Clcn3-201ENSMUST00000004430 C1qtnf1Q9QXP7 281 aa13.22□□□□□ -0.29
Clcn3-201ENSMUST00000004430 XdhQ00519 1335 aa13.22□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Siah3B2RWG3 268 aa13.22□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Trim5E9PV98 497 aa13.22□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Il13ra2O88786 383 aa13.22□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Pou5f1P20263 352 aaKnown RBP13.22□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Arhgap45Q3TBD2 1116 aa13.22□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Arhgap30Q640N3 1101 aa13.22□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Sik2Q8CFH6 931 aa13.22□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Rhobtb2Q91V93 728 aa13.22□□□□□ -0.29
Clcn3-201ENSMUST00000004430 DmgdhQ9DBT9 869 aa13.22□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Klrc1Q9Z202 244 aa13.22□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Akap10O88845 662 aa13.22□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Cyp2b9P12790 491 aa13.22□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Slc1a2P43006 572 aa13.22□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Shox2P70390 331 aa13.22□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Ptgs2Q05769 604 aa13.22□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Eps8Q08509 821 aa13.22□□□□□ -0.29
Clcn3-201ENSMUST00000004430 ZufspQ3T9Z9 577 aa13.22□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Arhgap17Q3UIA2 846 aa13.22□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Orai3Q6P8G8 290 aa13.22□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Nat14Q8BVG8 206 aa13.22□□□□□ -0.29
Clcn3-201ENSMUST00000004430 GancQ8BVW0 898 aa13.22□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Ano4Q8C5H1 955 aa13.22□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Colgalt1Q8K297 617 aa13.22□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Alas1Q8VC19 642 aa13.22□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Gmcl1Q920G9 524 aa13.22□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Gstt4Q9D4P7 240 aa13.22□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Styxl1Q9DAR2 321 aa13.22□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Noa1Q9JJG9 693 aaKnown RBP13.22□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Hey2Q9QUS4 339 aa13.22□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Ltn1Q6A009 1767 aa13.22□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Ltbp1Q8CG19 1712 aa13.22□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Pcna-ps2A0A140T8V5 261 aa13.21□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Cyp2c69E9PXC3 491 aa13.21□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Mroh4G3X8W1 983 aa13.21□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Cyp2c68K7N6C2 491 aa13.21□□□□□ -0.29
Clcn3-201ENSMUST00000004430 CidebO70303 219 aa13.21□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Pknox1O70477 436 aa13.21□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Il1rl1P14719 567 aa13.21□□□□□ -0.29
Clcn3-201ENSMUST00000004430 PcnaP17918 261 aa13.21□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Bcat1P24288 386 aa13.21□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Cyp2c40P56657 491 aa13.21□□□□□ -0.29
Retrieved 100 of 22,080 RNA–protein pairs in 116.5 ms