RNA–Protein interactions for RNA: YOR171C

LCB4, Transcript of Sphingoid long-chain base kinase, yeastyeast

Gene LCB4, Length 1,875 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LCB4YOR171C MET31Q03081 177 aa2.3□□□□□ -2.04
LCB4YOR171C YPR013CQ12145 317 aa2.3□□□□□ -2.04
LCB4YOR171C YPR145C-AQ2V2P0 78 aa2.3□□□□□ -2.04
LCB4YOR171C SNQ2P32568 1501 aaKnown RBP2.3□□□□□ -2.04
LCB4YOR171C PDR12Q02785 1511 aa2.3□□□□□ -2.04
LCB4YOR171C GDB1Q06625 1536 aa2.3□□□□□ -2.04
LCB4YOR171C RPA190P10964 1664 aaKnown RBP2.29□□□□□ -2.04
LCB4YOR171C PAU16P35994 123 aa2.29□□□□□ -2.04
LCB4YOR171C PAU15P40585 124 aa2.29□□□□□ -2.04
LCB4YOR171C RGM1Q00453 211 aa2.29□□□□□ -2.04
LCB4YOR171C YFL041W-AQ3E817 63 aa2.29□□□□□ -2.04
LCB4YOR171C UTH1P36135 365 aa2.28□□□□□ -2.04
LCB4YOR171C MRPS9P38120 278 aa2.28□□□□□ -2.04
LCB4YOR171C YFL051CP43552 160 aa2.28□□□□□ -2.04
LCB4YOR171C PAU5P43575 122 aa2.28□□□□□ -2.04
LCB4YOR171C IMP2P46972 177 aa2.28□□□□□ -2.04
LCB4YOR171C YIL014C-AQ02598 104 aa2.28□□□□□ -2.04
LCB4YOR171C YPR153WQ06537 140 aa2.28□□□□□ -2.04
LCB4YOR171C YDR381C-AQ3E6R5 114 aa2.28□□□□□ -2.04
LCB4YOR171C YPL038W-AQ3E7B4 63 aa2.28□□□□□ -2.04
LCB4YOR171C ULS1Q08562 1619 aa2.28□□□□□ -2.04
LCB4YOR171C RTC6O14464 93 aa2.28□□□□□ -2.04
LCB4YOR171C YKR032WP36127 104 aa2.28□□□□□ -2.04
LCB4YOR171C YHR180WP38868 163 aa2.28□□□□□ -2.04
LCB4YOR171C LAA1P39526 2014 aa2.28□□□□□ -2.04
LCB4YOR171C TY3B-GQ99315 1547 aa2.27□□□□□ -2.05
LCB4YOR171C MLP2P40457 1679 aa2.27□□□□□ -2.05
LCB4YOR171C IRC20Q06554 1556 aa2.27□□□□□ -2.05
LCB4YOR171C YLR236CA0A023PZG4 107 aa2.26□□□□□ -2.05
LCB4YOR171C RPL26AP05743 127 aaKnown RBP2.26□□□□□ -2.05
LCB4YOR171C YJL197C-AP0C5P0 93 aa2.26□□□□□ -2.05
LCB4YOR171C MRPL27P36526 146 aaPredicted RBP2.26□□□□□ -2.05
LCB4YOR171C COX23P38824 151 aa2.26□□□□□ -2.05
LCB4YOR171C YFL012WP43580 148 aa2.26□□□□□ -2.05
LCB4YOR171C PDR15Q04182 1529 aaKnown RBP2.26□□□□□ -2.05
LCB4YOR171C DOP1Q03921 1698 aa2.26□□□□□ -2.05
LCB4YOR171C RPO21P04050 1733 aaKnown RBP2.26□□□□□ -2.05
LCB4YOR171C MYO1P08964 1928 aa2.26□□□□□ -2.05
LCB4YOR171C ROX3P25046 220 aa2.26□□□□□ -2.05
LCB4YOR171C MRP17P28778 131 aa2.26□□□□□ -2.05
LCB4YOR171C SRX1P36077 127 aa2.26□□□□□ -2.05
LCB4YOR171C LST8P41318 303 aa2.26□□□□□ -2.05
LCB4YOR171C YLR194CQ05777 254 aa2.26□□□□□ -2.05
LCB4YOR171C YPR195CQ06594 109 aa2.26□□□□□ -2.05
LCB4YOR171C YOL118CQ08259 102 aa2.26□□□□□ -2.05
LCB4YOR171C YOR105WQ08504 108 aa2.26□□□□□ -2.05
LCB4YOR171C YDL157CQ12082 118 aa2.26□□□□□ -2.05
LCB4YOR171C YIL102C-AQ2V2P5 75 aa2.26□□□□□ -2.05
LCB4YOR171C YLR419WQ06698 1435 aaKnown RBP2.25□□□□□ -2.05
LCB4YOR171C RPL36BO14455 100 aaKnown RBP2.25□□□□□ -2.05
LCB4YOR171C RPL36AP05745 100 aaPredicted RBP2.25□□□□□ -2.05
LCB4YOR171C RPS22AP0C0W1 130 aaKnown RBP2.25□□□□□ -2.05
LCB4YOR171C RPS23AP0CX29 145 aaKnown RBP2.25□□□□□ -2.05
LCB4YOR171C RPS23BP0CX30 145 aa2.25□□□□□ -2.05
LCB4YOR171C NHP2P32495 156 aaPredicted RBP2.25□□□□□ -2.05
LCB4YOR171C YJL027CP47063 138 aaPredicted RBP2.25□□□□□ -2.05
LCB4YOR171C COX12Q01519 83 aa2.25□□□□□ -2.05
LCB4YOR171C VTH1P40438 1549 aa2.25□□□□□ -2.05
LCB4YOR171C VTH2P40890 1549 aa2.25□□□□□ -2.05
LCB4YOR171C YHR214C-DP0CX93 97 aa2.24□□□□□ -2.05
LCB4YOR171C RPL33BP41056 107 aaKnown RBP2.24□□□□□ -2.05
LCB4YOR171C MRPS16Q02608 121 aa2.24□□□□□ -2.05
LCB4YOR171C LSM6Q06406 86 aaKnown RBP2.24□□□□□ -2.05
LCB4YOR171C CMC4Q3E7A9 73 aa2.24□□□□□ -2.05
LCB4YOR171C MHF2Q3E829 80 aa2.24□□□□□ -2.05
LCB4YOR171C FLO9P39712 1322 aa2.24□□□□□ -2.05
LCB4YOR171C CIS3P47001 227 aa2.24□□□□□ -2.05
LCB4YOR171C RPS22BQ3E7Y3 130 aaKnown RBP2.24□□□□□ -2.05
LCB4YOR171C PDR5P33302 1511 aaKnown RBP2.23□□□□□ -2.05
LCB4YOR171C YBT1P32386 1661 aa2.23□□□□□ -2.05
LCB4YOR171C DAD4P69851 72 aa2.23□□□□□ -2.05
LCB4YOR171C YOR343CQ12484 108 aa2.23□□□□□ -2.05
LCB4YOR171C COX8P04039 78 aa2.22□□□□□ -2.05
LCB4YOR171C QCR8P08525 94 aa2.22□□□□□ -2.05
LCB4YOR171C HSP150P32478 413 aa2.22□□□□□ -2.05
LCB4YOR171C YBR209WP38311 105 aa2.22□□□□□ -2.05
LCB4YOR171C YEL014CP39999 101 aa2.22□□□□□ -2.05
LCB4YOR171C HPA2Q06592 156 aa2.22□□□□□ -2.05
LCB4YOR171C DNF1P32660 1571 aa2.22□□□□□ -2.05
LCB4YOR171C UTP10P42945 1769 aaKnown RBP2.22□□□□□ -2.05
LCB4YOR171C MRPL31P14063 131 aaPredicted RBP2.22□□□□□ -2.05
LCB4YOR171C TIM12P32830 109 aa2.22□□□□□ -2.05
LCB4YOR171C PDX3P38075 228 aaKnown RBP2.22□□□□□ -2.05
LCB4YOR171C YHR022CP38763 256 aa2.22□□□□□ -2.05
LCB4YOR171C BCK1Q01389 1478 aa2.22□□□□□ -2.05
LCB4YOR171C GSC2P40989 1895 aa2.21□□□□□ -2.06
LCB4YOR171C HMRA2P0CY13 119 aa2.21□□□□□ -2.06
LCB4YOR171C SEC11P15367 167 aa2.21□□□□□ -2.06
LCB4YOR171C FPR1P20081 114 aaKnown RBP2.21□□□□□ -2.06
LCB4YOR171C YBR027CP38220 110 aa2.21□□□□□ -2.06
LCB4YOR171C CDC25P04821 1589 aa2.21□□□□□ -2.06
LCB4YOR171C MLP1Q02455 1875 aaKnown RBP2.21□□□□□ -2.06
LCB4YOR171C SMX2P40204 77 aaKnown RBP2.2□□□□□ -2.06
LCB4YOR171C POR2P40478 281 aa2.2□□□□□ -2.06
LCB4YOR171C VPS68Q12016 184 aa2.2□□□□□ -2.06
LCB4YOR171C YMR030W-AQ3E760 96 aa2.2□□□□□ -2.06
LCB4YOR171C ECM29P38737 1868 aa2.2□□□□□ -2.06
LCB4YOR171C YAL065CO13511 128 aa2.2□□□□□ -2.06
LCB4YOR171C MRPL38P35996 138 aaPredicted RBP2.2□□□□□ -2.06
LCB4YOR171C YHL037CP38733 133 aa2.2□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 49.3 ms