RNA–Protein interactions for RNA: YLR320W

MMS22, Transcript of Subunit of E3 ubiquitin ligase complex involved in replication repair, yeast

Gene MMS22, Length 4,365 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MMS22	YLR320W	COA4	Q05809	96 aa		0.92	□□□□□ -2.26
MMS22	YLR320W	MHF2	Q3E829	80 aa		0.92	□□□□□ -2.26
MMS22	YLR320W	MEC1	P38111	2368 aa		0.91	□□□□□ -2.26
MMS22	YLR320W	YGL230C	P53074	147 aa		0.91	□□□□□ -2.26
MMS22	YLR320W	PDX3	P38075	228 aa	Known RBP	0.91	□□□□□ -2.26
MMS22	YLR320W	TIM8	P57744	87 aa		0.91	□□□□□ -2.26
MMS22	YLR320W	RPS25B	P0C0T4	108 aa	Known RBP	0.91	□□□□□ -2.26
MMS22	YLR320W	EMC5	P40540	141 aa		0.91	□□□□□ -2.26
MMS22	YLR320W	RPS25A	Q3E792	108 aa	Predicted RBP	0.91	□□□□□ -2.26
MMS22	YLR320W	YNL019C	P53975	284 aa		0.9	□□□□□ -2.26
MMS22	YLR320W	IRC21	Q04772	201 aa		0.9	□□□□□ -2.26
MMS22	YLR320W	RNH202	Q05635	350 aa		0.9	□□□□□ -2.26
MMS22	YLR320W	YHR214C-D	P0CX93	97 aa		0.9	□□□□□ -2.27
MMS22	YLR320W	DCV1	P43595	202 aa		0.9	□□□□□ -2.27
MMS22	YLR320W	THG1	P53215	237 aa	Known RBP	0.9	□□□□□ -2.27
MMS22	YLR320W	COF1	Q03048	143 aa	Known RBP	0.9	□□□□□ -2.27
MMS22	YLR320W	DML1	Q03652	475 aa		0.9	□□□□□ -2.27
MMS22	YLR320W	YHR007C-A	Q07074	71 aa		0.9	□□□□□ -2.27
MMS22	YLR320W	Q0144	Q9ZZW2	109 aa		0.9	□□□□□ -2.27
MMS22	YLR320W	RGI1	P40043	161 aa	Predicted RBP	0.9	□□□□□ -2.27
MMS22	YLR320W	YOR385W	Q08909	290 aa		0.9	□□□□□ -2.27
MMS22	YLR320W	YHL037C	P38733	133 aa		0.89	□□□□□ -2.27
MMS22	YLR320W	TOR2	P32600	2474 aa	Known RBP	0.89	□□□□□ -2.27
MMS22	YLR320W	FMP49	A0A023PZB3	126 aa		0.89	□□□□□ -2.27
MMS22	YLR320W	RTC6	O14464	93 aa		0.89	□□□□□ -2.27
MMS22	YLR320W	YML079W	Q03629	201 aa		0.89	□□□□□ -2.27
MMS22	YLR320W	ATG10	Q07879	167 aa		0.89	□□□□□ -2.27
MMS22	YLR320W	PRE1	P22141	198 aa	Known RBP	0.89	□□□□□ -2.27
MMS22	YLR320W	LSM8	P47093	109 aa	Known RBP	0.89	□□□□□ -2.27
MMS22	YLR320W	YNL146C-A	Q3E7Z1	64 aa		0.89	□□□□□ -2.27
MMS22	YLR320W	MRP49	P32388	137 aa		0.89	□□□□□ -2.27
MMS22	YLR320W	EMP24	P32803	203 aa	Known RBP	0.89	□□□□□ -2.27
MMS22	YLR320W	YGR039W	P53225	103 aa		0.89	□□□□□ -2.27
MMS22	YLR320W	SOM1	Q05676	74 aa		0.89	□□□□□ -2.27
MMS22	YLR320W	RAF1	Q06891	181 aa		0.89	□□□□□ -2.27
MMS22	YLR320W	COA6	Q3E846	104 aa		0.89	□□□□□ -2.27
MMS22	YLR320W	YBR027C	P38220	110 aa		0.88	□□□□□ -2.27
MMS22	YLR320W	HPA2	Q06592	156 aa		0.88	□□□□□ -2.27
MMS22	YLR320W	YLR118C	Q12354	227 aa		0.88	□□□□□ -2.27
MMS22	YLR320W	NHP2	P32495	156 aa	Predicted RBP	0.88	□□□□□ -2.27
MMS22	YLR320W	HSP10	P38910	106 aa		0.88	□□□□□ -2.27
MMS22	YLR320W	UTP20	P35194	2493 aa	Known RBP	0.88	□□□□□ -2.27
MMS22	YLR320W	CCS1	P40202	249 aa	Known RBP	0.88	□□□□□ -2.27
MMS22	YLR320W	CSN9	Q03981	162 aa		0.88	□□□□□ -2.27
MMS22	YLR320W	YHR213W-A	Q8TGT4	77 aa		0.88	□□□□□ -2.27
MMS22	YLR320W	YFL051C	P43552	160 aa		0.87	□□□□□ -2.27
MMS22	YLR320W	ALB1	P47019	175 aa	Predicted RBP	0.87	□□□□□ -2.27
MMS22	YLR320W	CNL1	Q06333	122 aa		0.87	□□□□□ -2.27
MMS22	YLR320W	YOL131W	Q08270	108 aa		0.87	□□□□□ -2.27
MMS22	YLR320W	YOR072W	Q08486	104 aa		0.87	□□□□□ -2.27
MMS22	YLR320W	NUM1	Q00402	2748 aa		0.87	□□□□□ -2.27
MMS22	YLR320W	YFL065C	P43539	102 aa		0.87	□□□□□ -2.27
MMS22	YLR320W	SPG1	P50088	95 aa		0.87	□□□□□ -2.27
MMS22	YLR320W	SDH7	Q04401	133 aa		0.87	□□□□□ -2.27
MMS22	YLR320W	NMA1	Q06178	401 aa	Known RBP	0.87	□□□□□ -2.27
MMS22	YLR320W	FYV7	Q12247	151 aa		0.87	□□□□□ -2.27
MMS22	YLR320W	UBC5	P15732	148 aa		0.87	□□□□□ -2.27
MMS22	YLR320W	GTT1	P40582	234 aa		0.87	□□□□□ -2.27
MMS22	YLR320W	YHR212W-A	P0CX91	67 aa		0.87	□□□□□ -2.27
MMS22	YLR320W	MVB12	P42939	101 aa		0.87	□□□□□ -2.27
MMS22	YLR320W	YGL149W	P53116	101 aa		0.87	□□□□□ -2.27
MMS22	YLR320W	YDR366C	P87287	132 aa		0.87	□□□□□ -2.27
MMS22	YLR320W	LCL2	Q08045	131 aa		0.87	□□□□□ -2.27
MMS22	YLR320W	RTR2	Q12378	196 aa		0.87	□□□□□ -2.27
MMS22	YLR320W	RPS1B	P23248	255 aa	Known RBP	0.86	□□□□□ -2.27
MMS22	YLR320W	RPL14A	P36105	138 aa	Known RBP	0.86	□□□□□ -2.27
MMS22	YLR320W	RPL14B	P38754	138 aa	Known RBP	0.86	□□□□□ -2.27
MMS22	YLR320W	HUA1	P40325	198 aa		0.86	□□□□□ -2.27
MMS22	YLR320W	YIL102C	P40488	101 aa		0.86	□□□□□ -2.27
MMS22	YLR320W	VMA21	P41806	77 aa		0.86	□□□□□ -2.27
MMS22	YLR320W	SWC7	Q06707	132 aa		0.86	□□□□□ -2.27
MMS22	YLR320W	AIM11	P87275	137 aa		0.86	□□□□□ -2.27
MMS22	YLR320W	NAT5	Q08689	176 aa		0.86	□□□□□ -2.27
MMS22	YLR320W	RPL36B	O14455	100 aa	Known RBP	0.86	□□□□□ -2.27
MMS22	YLR320W	RPL36A	P05745	100 aa	Predicted RBP	0.86	□□□□□ -2.27
MMS22	YLR320W	COX9	P07255	59 aa		0.86	□□□□□ -2.27
MMS22	YLR320W	MRPL44	P19956	98 aa		0.86	□□□□□ -2.27
MMS22	YLR320W	YEL008W	P40001	126 aa		0.86	□□□□□ -2.27
MMS22	YLR320W	TDA2	P40045	126 aa		0.86	□□□□□ -2.27
MMS22	YLR320W	YMR252C	Q04814	134 aa		0.86	□□□□□ -2.27
MMS22	YLR320W	IRA2	P19158	3079 aa		0.86	□□□□□ -2.27
MMS22	YLR320W	INO4	P13902	151 aa		0.85	□□□□□ -2.27
MMS22	YLR320W	LHP1	P33399	275 aa	Known RBP	0.85	□□□□□ -2.27
MMS22	YLR320W	PHS1	P40857	217 aa		0.85	□□□□□ -2.27
MMS22	YLR320W	DYN2	Q02647	92 aa		0.85	□□□□□ -2.27
MMS22	YLR320W	Q0297	Q9ZZV8	51 aa		0.85	□□□□□ -2.27
MMS22	YLR320W	DIE2	P50076	525 aa		0.85	□□□□□ -2.27
MMS22	YLR320W	PMP3	P87284	55 aa		0.85	□□□□□ -2.27
MMS22	YLR320W	NHP10	Q03435	203 aa		0.85	□□□□□ -2.27
MMS22	YLR320W	GPI11	Q06636	219 aa		0.85	□□□□□ -2.27
MMS22	YLR320W	IRC19	Q07843	230 aa		0.85	□□□□□ -2.27
MMS22	YLR320W	VAM10	Q08474	114 aa		0.85	□□□□□ -2.27
MMS22	YLR320W	VMA7	P39111	118 aa		0.85	□□□□□ -2.27
MMS22	YLR320W	YER137C	P40083	148 aa	Known RBP	0.85	□□□□□ -2.27
MMS22	YLR320W	SNA2	P56508	79 aa		0.85	□□□□□ -2.27
MMS22	YLR320W	ENV10	Q99382	181 aa		0.85	□□□□□ -2.27
MMS22	YLR320W	IRA1	P18963	3092 aa		0.84	□□□□□ -2.27
MMS22	YLR320W	ATG8	P38182	117 aa	RIP-Chip data	0.84	□□□□□ -2.27	not detected
MMS22	YLR320W	APS2	Q00381	147 aa		0.84	□□□□□ -2.27
MMS22	YLR320W	YEL073C	P39974	107 aa		0.84	□□□□□ -2.28

Retrieved 100 of 5,963 RNA–protein pairs in 43.5 ms