RNA–Protein interactions for RNA: YKL011C

CCE1, Transcript of Mitochondrial cruciform cutting endonuclease, yeastyeast

Gene CCE1, Length 1,062 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CCE1YKL011C YLR419WQ06698 1435 aaKnown RBP0.33□□□□□ -2.36
CCE1YKL011C YHR138CP38841 114 aaPredicted RBP0.33□□□□□ -2.36
CCE1YKL011C YDR210WQ03482 75 aa0.33□□□□□ -2.36
CCE1YKL011C TOP2P06786 1428 aaKnown RBP0.32□□□□□ -2.36
CCE1YKL011C BUD23P25627 275 aaPredicted RBP0.32□□□□□ -2.36
CCE1YKL011C COX19Q3E731 98 aa0.32□□□□□ -2.36
CCE1YKL011C YER039C-AP0CD97 72 aa0.31□□□□□ -2.36
CCE1YKL011C VMA21P41806 77 aa0.31□□□□□ -2.36
CCE1YKL011C YGR164WP53291 111 aa0.31□□□□□ -2.36
CCE1YKL011C RPA12P32529 125 aaKnown RBP0.3□□□□□ -2.36
CCE1YKL011C MPC2P38857 129 aa0.29□□□□□ -2.36
CCE1YKL011C SWC7Q06707 132 aa0.29□□□□□ -2.36
CCE1YKL011C YPL038W-AQ3E7B4 63 aa0.29□□□□□ -2.36
CCE1YKL011C SPP41P38904 1435 aa0.29□□□□□ -2.36
CCE1YKL011C YOR304C-AO14468 76 aa0.27□□□□□ -2.37
CCE1YKL011C YCR101CP25607 182 aa0.26□□□□□ -2.37
CCE1YKL011C YNL190WP53872 204 aa0.26□□□□□ -2.37
CCE1YKL011C SRB6P32570 121 aa0.25□□□□□ -2.37
CCE1YKL011C COX12Q01519 83 aa0.24□□□□□ -2.37
CCE1YKL011C MIC10Q96VH5 97 aa0.24□□□□□ -2.37
CCE1YKL011C RPS11AP0CX47 156 aaKnown RBP0.23□□□□□ -2.37
CCE1YKL011C RPS11BP0CX48 156 aaKnown RBP0.23□□□□□ -2.37
CCE1YKL011C YOS1Q3E834 85 aa0.23□□□□□ -2.37
CCE1YKL011C LYS2P07702 1392 aa0.22□□□□□ -2.37
CCE1YKL011C RUB1Q03919 77 aa0.22□□□□□ -2.37
CCE1YKL011C GNA1P43577 159 aaPredicted RBP0.21□□□□□ -2.38
CCE1YKL011C RIM15P43565 1770 aa0.21□□□□□ -2.38
CCE1YKL011C LHP1P33399 275 aaKnown RBP0.2□□□□□ -2.38
CCE1YKL011C MRX7P53869 86 aa0.2□□□□□ -2.38
CCE1YKL011C MRPL38P35996 138 aaPredicted RBP0.19□□□□□ -2.38
CCE1YKL011C YMR103CQ04436 120 aa0.19□□□□□ -2.38
CCE1YKL011C KRE5P22023 1365 aa0.19□□□□□ -2.38
CCE1YKL011C UBC4P15731 148 aa0.18□□□□□ -2.38
CCE1YKL011C YCR095W-AQ3E787 52 aa0.18□□□□□ -2.38
CCE1YKL011C SRB8P25648 1427 aa0.17□□□□□ -2.38
CCE1YKL011C SSN2P38931 1420 aa0.17□□□□□ -2.38
CCE1YKL011C ICY1Q04329 127 aa0.17□□□□□ -2.38
CCE1YKL011C PAU5P43575 122 aa0.16□□□□□ -2.38
CCE1YKL011C SNA2P56508 79 aa0.15□□□□□ -2.39
CCE1YKL011C BPT1P14772 1559 aa0.15□□□□□ -2.39
CCE1YKL011C PAU6P0CE90 120 aa0.14□□□□□ -2.39
CCE1YKL011C PAU18P0CE91 120 aa0.14□□□□□ -2.39
CCE1YKL011C MRP17P28778 131 aa0.13□□□□□ -2.39
CCE1YKL011C YMR090WQ04304 227 aaKnown RBP0.13□□□□□ -2.39
CCE1YKL011C YRF1-2P40105 1681 aa0.13□□□□□ -2.39
CCE1YKL011C TY1B-BLQ12490 1755 aa0.12□□□□□ -2.39
CCE1YKL011C UBC5P15732 148 aa0.12□□□□□ -2.39
CCE1YKL011C YBR292CP38357 123 aa0.12□□□□□ -2.39
CCE1YKL011C YNR034W-AQ3E841 98 aa0.12□□□□□ -2.39
CCE1YKL011C ROX3P25046 220 aa0.11□□□□□ -2.39
CCE1YKL011C YNL198CP40166 100 aa0.11□□□□□ -2.39
CCE1YKL011C RPC10P40422 70 aa0.11□□□□□ -2.39
CCE1YKL011C RPS12P48589 143 aaKnown RBP0.11□□□□□ -2.39
CCE1YKL011C NTE1Q04958 1679 aa0.11□□□□□ -2.39
CCE1YKL011C TY3B-IQ7LHG5 1498 aaKnown RBP0.1□□□□□ -2.39
CCE1YKL011C RSM18P40033 138 aa0.1□□□□□ -2.39
CCE1YKL011C PAU20Q08322 120 aa0.1□□□□□ -2.39
CCE1YKL011C TSC11P40061 1430 aa0.1□□□□□ -2.39
CCE1YKL011C MIX14Q04341 121 aa0.09□□□□□ -2.4
CCE1YKL011C YRF1-1P0CX20 1796 aa0.09□□□□□ -2.4
CCE1YKL011C YRF1-5P0CX21 1796 aa0.09□□□□□ -2.4
CCE1YKL011C YRF1-8P0CX22 1796 aa0.09□□□□□ -2.4
CCE1YKL011C YBR090CP38253 122 aa0.08□□□□□ -2.4
CCE1YKL011C YER137CP40083 148 aaKnown RBP0.08□□□□□ -2.4
CCE1YKL011C YBL071CP38185 102 aa0.07□□□□□ -2.4
CCE1YKL011C RSM19P53733 91 aaPredicted RBP0.07□□□□□ -2.4
CCE1YKL011C ATX1P38636 73 aa0.06□□□□□ -2.4
CCE1YKL011C YBR016WP38216 128 aa0.05□□□□□ -2.4
CCE1YKL011C AIM19P40502 157 aa0.05□□□□□ -2.4
CCE1YKL011C YFR009W-AP0C5M9 85 aa0.03□□□□□ -2.4
CCE1YKL011C PAU1P0CE88 120 aa0.03□□□□□ -2.4
CCE1YKL011C PAU14P0CE89 120 aa0.03□□□□□ -2.4
CCE1YKL011C PAU8P0CE92 120 aa0.03□□□□□ -2.4
CCE1YKL011C PAU11P0CE93 120 aa0.03□□□□□ -2.4
CCE1YKL011C PAU13P38725 120 aa0.03□□□□□ -2.4
CCE1YKL011C YHL005CP38752 130 aa0.03□□□□□ -2.4
CCE1YKL011C PAU10Q03050 120 aa0.03□□□□□ -2.4
CCE1YKL011C PAU9Q3E770 120 aa0.03□□□□□ -2.4
CCE1YKL011C KSH1Q8TGJ3 72 aa0.03□□□□□ -2.4
CCE1YKL011C CAT8P39113 1433 aa0.03□□□□□ -2.41
CCE1YKL011C GEA1P47102 1408 aaPredicted RBP0.03□□□□□ -2.41
CCE1YKL011C YOR289WQ12012 251 aaPredicted RBP0.02□□□□□ -2.41
CCE1YKL011C RGI1P40043 161 aaPredicted RBP0□□□□□ -2.41
CCE1YKL011C PDR11P40550 1411 aa0□□□□□ -2.41
CCE1YKL011C SPC1P46965 94 aa-0.01□□□□□ -2.41
CCE1YKL011C NHP10Q03435 203 aa-0.01□□□□□ -2.41
CCE1YKL011C YBR056W-AI2HB52 66 aa-0.02□□□□□ -2.41
CCE1YKL011C YJR107C-AP0CT86 78 aa-0.02□□□□□ -2.41
CCE1YKL011C HMRA1P0CY11 126 aa-0.02□□□□□ -2.41
CCE1YKL011C MDS3P53094 1487 aa-0.03□□□□□ -2.41
CCE1YKL011C EMC5P40540 141 aa-0.03□□□□□ -2.41
CCE1YKL011C RPL38P49167 78 aaKnown RBP-0.03□□□□□ -2.41
CCE1YKL011C PAU4P53427 120 aa-0.03□□□□□ -2.41
CCE1YKL011C RRT15Q3E811 62 aa-0.06□□□□□ -2.42
CCE1YKL011C GEA2P39993 1459 aaKnown RBP-0.07□□□□□ -2.42
CCE1YKL011C SGF11Q03067 99 aa-0.07□□□□□ -2.42
CCE1YKL011C YNL042W-BQ3E7Z2 85 aa-0.07□□□□□ -2.42
CCE1YKL011C BUD4P47136 1447 aa-0.07□□□□□ -2.42
CCE1YKL011C REV3P14284 1504 aa-0.08□□□□□ -2.42
CCE1YKL011C YIL134C-AQ45U18 67 aa-0.08□□□□□ -2.42
Retrieved 100 of 5,963 RNA–protein pairs in 13.2 ms