RNA–Protein interactions for RNA: YJR102C

VPS25, Transcript of Component of the ESCRT-II complex, yeastyeast

Gene VPS25, Length 609 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS25YJR102C BUD23P25627 275 aaPredicted RBP0.49□□□□□ -2.33
VPS25YJR102C SHU1P38751 150 aa0.49□□□□□ -2.33
VPS25YJR102C YIL086CP40503 102 aa0.49□□□□□ -2.33
VPS25YJR102C IMP2P46972 177 aa0.49□□□□□ -2.33
VPS25YJR102C SWC7Q06707 132 aa0.49□□□□□ -2.33
VPS25YJR102C ATX1P38636 73 aa0.48□□□□□ -2.33
VPS25YJR102C SPP41P38904 1435 aa0.47□□□□□ -2.33
VPS25YJR102C YLR255CO13574 117 aa0.47□□□□□ -2.33
VPS25YJR102C YPL038W-AQ3E7B4 63 aa0.47□□□□□ -2.33
VPS25YJR102C YER039C-AP0CD97 72 aa0.46□□□□□ -2.34
VPS25YJR102C RUB1Q03919 77 aa0.46□□□□□ -2.34
VPS25YJR102C TOP2P06786 1428 aaKnown RBP0.46□□□□□ -2.34
VPS25YJR102C RPA12P32529 125 aaKnown RBP0.45□□□□□ -2.34
VPS25YJR102C MPC2P38857 129 aa0.45□□□□□ -2.34
VPS25YJR102C CCW14O13547 238 aa0.44□□□□□ -2.34
VPS25YJR102C LHP1P33399 275 aaKnown RBP0.44□□□□□ -2.34
VPS25YJR102C YLR419WQ06698 1435 aaKnown RBP0.44□□□□□ -2.34
VPS25YJR102C YCR101CP25607 182 aa0.43□□□□□ -2.34
VPS25YJR102C MRP17P28778 131 aa0.43□□□□□ -2.34
VPS25YJR102C COX12Q01519 83 aa0.43□□□□□ -2.34
VPS25YJR102C COX19Q3E731 98 aa0.43□□□□□ -2.34
VPS25YJR102C PDX3P38075 228 aaKnown RBP0.42□□□□□ -2.34
VPS25YJR102C RGI1P40043 161 aaPredicted RBP0.42□□□□□ -2.34
VPS25YJR102C GNA1P43577 159 aaPredicted RBP0.42□□□□□ -2.34
VPS25YJR102C SNA2P56508 79 aa0.42□□□□□ -2.34
VPS25YJR102C MIC10Q96VH5 97 aa0.42□□□□□ -2.34
VPS25YJR102C YMR090WQ04304 227 aaKnown RBP0.41□□□□□ -2.34
VPS25YJR102C YCR095W-AQ3E787 52 aa0.41□□□□□ -2.34
VPS25YJR102C YOS1Q3E834 85 aa0.41□□□□□ -2.34
VPS25YJR102C MDS3P53094 1487 aa0.41□□□□□ -2.34
VPS25YJR102C YBR292CP38357 123 aa0.4□□□□□ -2.35
VPS25YJR102C RPS12P48589 143 aaKnown RBP0.4□□□□□ -2.35
VPS25YJR102C YDR210WQ03482 75 aa0.4□□□□□ -2.35
VPS25YJR102C LYS2P07702 1392 aa0.4□□□□□ -2.35
VPS25YJR102C RPS11AP0CX47 156 aaKnown RBP0.39□□□□□ -2.35
VPS25YJR102C RPS11BP0CX48 156 aaKnown RBP0.39□□□□□ -2.35
VPS25YJR102C EMC5P40540 141 aa0.39□□□□□ -2.35
VPS25YJR102C MRX7P53869 86 aa0.39□□□□□ -2.35
VPS25YJR102C YNL190WP53872 204 aa0.39□□□□□ -2.35
VPS25YJR102C YMR103CQ04436 120 aa0.39□□□□□ -2.35
VPS25YJR102C PAU20Q08322 120 aa0.39□□□□□ -2.35
VPS25YJR102C AIM19P40502 157 aa0.38□□□□□ -2.35
VPS25YJR102C SRB8P25648 1427 aa0.38□□□□□ -2.35
VPS25YJR102C PAU1P0CE88 120 aa0.37□□□□□ -2.35
VPS25YJR102C PAU14P0CE89 120 aa0.37□□□□□ -2.35
VPS25YJR102C PAU6P0CE90 120 aa0.37□□□□□ -2.35
VPS25YJR102C PAU18P0CE91 120 aa0.37□□□□□ -2.35
VPS25YJR102C PAU8P0CE92 120 aa0.37□□□□□ -2.35
VPS25YJR102C PAU11P0CE93 120 aa0.37□□□□□ -2.35
VPS25YJR102C PAU13P38725 120 aa0.37□□□□□ -2.35
VPS25YJR102C SNU13P39990 126 aaKnown RBP0.37□□□□□ -2.35
VPS25YJR102C YER137CP40083 148 aaKnown RBP0.37□□□□□ -2.35
VPS25YJR102C PAU10Q03050 120 aa0.37□□□□□ -2.35
VPS25YJR102C ICY1Q04329 127 aa0.37□□□□□ -2.35
VPS25YJR102C PAU9Q3E770 120 aa0.37□□□□□ -2.35
VPS25YJR102C RIM15P43565 1770 aa0.37□□□□□ -2.35
VPS25YJR102C KRE5P22023 1365 aa0.36□□□□□ -2.35
VPS25YJR102C YBR090CP38253 122 aa0.36□□□□□ -2.35
VPS25YJR102C FYV7Q12247 151 aa0.36□□□□□ -2.35
VPS25YJR102C GEA1P47102 1408 aaPredicted RBP0.36□□□□□ -2.35
VPS25YJR102C BUD4P47136 1447 aa0.36□□□□□ -2.35
VPS25YJR102C GEA2P39993 1459 aaKnown RBP0.35□□□□□ -2.35
VPS25YJR102C UBC4P15731 148 aa0.35□□□□□ -2.35
VPS25YJR102C UBC5P15732 148 aa0.35□□□□□ -2.35
VPS25YJR102C YNL198CP40166 100 aa0.35□□□□□ -2.35
VPS25YJR102C PAU5P43575 122 aa0.35□□□□□ -2.35
VPS25YJR102C RPL38P49167 78 aaKnown RBP0.35□□□□□ -2.35
VPS25YJR102C PAU4P53427 120 aa0.35□□□□□ -2.35
VPS25YJR102C MIX14Q04341 121 aa0.35□□□□□ -2.35
VPS25YJR102C ZEO1Q08245 113 aa0.35□□□□□ -2.35
VPS25YJR102C SSN2P38931 1420 aa0.35□□□□□ -2.35
VPS25YJR102C CAT8P39113 1433 aa0.35□□□□□ -2.35
VPS25YJR102C NHP2P32495 156 aaPredicted RBP0.34□□□□□ -2.36
VPS25YJR102C MRPL38P35996 138 aaPredicted RBP0.34□□□□□ -2.36
VPS25YJR102C YHL005CP38752 130 aa0.34□□□□□ -2.36
VPS25YJR102C TSC11P40061 1430 aa0.34□□□□□ -2.36
VPS25YJR102C YKL068W-AQ3E826 78 aa0.34□□□□□ -2.36
VPS25YJR102C SUS1Q6WNK7 96 aa0.34□□□□□ -2.36
VPS25YJR102C ROX3P25046 220 aa0.33□□□□□ -2.36
VPS25YJR102C MHF2Q3E829 80 aa0.33□□□□□ -2.36
VPS25YJR102C REV3P14284 1504 aa0.33□□□□□ -2.36
VPS25YJR102C YRF1-1P0CX20 1796 aa0.32□□□□□ -2.36
VPS25YJR102C YRF1-5P0CX21 1796 aa0.32□□□□□ -2.36
VPS25YJR102C YRF1-8P0CX22 1796 aa0.32□□□□□ -2.36
VPS25YJR102C PDR11P40550 1411 aa0.32□□□□□ -2.36
VPS25YJR102C YJR107C-AP0CT86 78 aa0.32□□□□□ -2.36
VPS25YJR102C YHR214C-DP0CX93 97 aa0.32□□□□□ -2.36
VPS25YJR102C COX7P10174 60 aa0.32□□□□□ -2.36
VPS25YJR102C RSM18P40033 138 aa0.32□□□□□ -2.36
VPS25YJR102C MSL1P40567 111 aaPredicted RBP0.32□□□□□ -2.36
VPS25YJR102C RSM19P53733 91 aaPredicted RBP0.32□□□□□ -2.36
VPS25YJR102C YNR034W-AQ3E841 98 aa0.32□□□□□ -2.36
VPS25YJR102C YIL134C-AQ45U18 67 aa0.32□□□□□ -2.36
VPS25YJR102C TY3B-IQ7LHG5 1498 aaKnown RBP0.32□□□□□ -2.36
VPS25YJR102C NTE1Q04958 1679 aa0.32□□□□□ -2.36
VPS25YJR102C RSF2P46974 1380 aa0.32□□□□□ -2.36
VPS25YJR102C HMRA1P0CY11 126 aa0.31□□□□□ -2.36
VPS25YJR102C TOM6P33448 61 aa0.31□□□□□ -2.36
VPS25YJR102C YBL071CP38185 102 aa0.31□□□□□ -2.36
VPS25YJR102C RPC10P40422 70 aa0.31□□□□□ -2.36
Retrieved 100 of 5,963 RNA–protein pairs in 16.1 ms