RNA–Protein interactions for RNA: YDR067C

OCA6, Transcript of Cytoplasmic protein required for replication of Brome mosaic virus, yeast

Gene OCA6, Length 675 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
OCA6	YDR067C	YLR419W	Q06698	1435 aa	Known RBP	0.12	□□□□□ -2.39
OCA6	YDR067C	TAO3	P40468	2376 aa		0.11	□□□□□ -2.39
OCA6	YDR067C	TY4B-H	P0C2J7	1802 aa		0.11	□□□□□ -2.39
OCA6	YDR067C	SNF2	P22082	1703 aa		0.11	□□□□□ -2.39
OCA6	YDR067C	YOR304C-A	O14468	76 aa		0.11	□□□□□ -2.39
OCA6	YDR067C	YCR101C	P25607	182 aa		0.11	□□□□□ -2.39
OCA6	YDR067C	PAU16	P35994	123 aa		0.11	□□□□□ -2.39
OCA6	YDR067C	PAU15	P40585	124 aa		0.11	□□□□□ -2.39
OCA6	YDR067C	YPL038W-A	Q3E7B4	63 aa		0.11	□□□□□ -2.39
OCA6	YDR067C	SEC7	P11075	2009 aa	Known RBP	0.11	□□□□□ -2.39
OCA6	YDR067C	RPO41	P13433	1351 aa	Known RBP	0.1	□□□□□ -2.39
OCA6	YDR067C	FAS2	P19097	1887 aa	Known RBP	0.1	□□□□□ -2.39
OCA6	YDR067C	RPS11A	P0CX47	156 aa	Known RBP	0.1	□□□□□ -2.39
OCA6	YDR067C	RPS11B	P0CX48	156 aa	Known RBP	0.1	□□□□□ -2.39
OCA6	YDR067C	MRP17	P28778	131 aa		0.1	□□□□□ -2.39
OCA6	YDR067C	YBR292C	P38357	123 aa		0.1	□□□□□ -2.39
OCA6	YDR067C	GNA1	P43577	159 aa	Predicted RBP	0.1	□□□□□ -2.39
OCA6	YDR067C	YDR210W	Q03482	75 aa		0.1	□□□□□ -2.39
OCA6	YDR067C	SPP41	P38904	1435 aa		0.1	□□□□□ -2.39
OCA6	YDR067C	YRF1-6	P53819	1859 aa		0.1	□□□□□ -2.39
OCA6	YDR067C	YER039C-A	P0CD97	72 aa		0.09	□□□□□ -2.4
OCA6	YDR067C	RUB1	Q03919	77 aa		0.09	□□□□□ -2.4
OCA6	YDR067C	ICY1	Q04329	127 aa		0.09	□□□□□ -2.4
OCA6	YDR067C	SRB8	P25648	1427 aa		0.09	□□□□□ -2.4
OCA6	YDR067C	UBC4	P15731	148 aa		0.08	□□□□□ -2.4
OCA6	YDR067C	BUD23	P25627	275 aa	Predicted RBP	0.08	□□□□□ -2.4
OCA6	YDR067C	MRPL38	P35996	138 aa	Predicted RBP	0.08	□□□□□ -2.4
OCA6	YDR067C	YMR090W	Q04304	227 aa	Known RBP	0.08	□□□□□ -2.4
OCA6	YDR067C	YMR103C	Q04436	120 aa		0.08	□□□□□ -2.4
OCA6	YDR067C	MIC10	Q96VH5	97 aa		0.08	□□□□□ -2.4
OCA6	YDR067C	POL2	P21951	2222 aa	Known RBP	0.07	□□□□□ -2.4
OCA6	YDR067C	LYS2	P07702	1392 aa		0.07	□□□□□ -2.4
OCA6	YDR067C	MYO1	P08964	1928 aa		0.07	□□□□□ -2.4
OCA6	YDR067C	SSN2	P38931	1420 aa		0.07	□□□□□ -2.4
OCA6	YDR067C	UBC5	P15732	148 aa		0.07	□□□□□ -2.4
OCA6	YDR067C	RPA12	P32529	125 aa	Known RBP	0.07	□□□□□ -2.4
OCA6	YDR067C	PDX3	P38075	228 aa	Known RBP	0.07	□□□□□ -2.4
OCA6	YDR067C	YBR090C	P38253	122 aa		0.07	□□□□□ -2.4
OCA6	YDR067C	YNL198C	P40166	100 aa		0.07	□□□□□ -2.4
OCA6	YDR067C	AIM19	P40502	157 aa		0.07	□□□□□ -2.4
OCA6	YDR067C	MRX7	P53869	86 aa		0.07	□□□□□ -2.4
OCA6	YDR067C	SNA2	P56508	79 aa		0.07	□□□□□ -2.4
OCA6	YDR067C	MIX14	Q04341	121 aa		0.07	□□□□□ -2.4
OCA6	YDR067C	YCR095W-A	Q3E787	52 aa		0.07	□□□□□ -2.4
OCA6	YDR067C	YHL005C	P38752	130 aa		0.06	□□□□□ -2.4
OCA6	YDR067C	RPS12	P48589	143 aa	Known RBP	0.06	□□□□□ -2.4
OCA6	YDR067C	PAU20	Q08322	120 aa		0.06	□□□□□ -2.4
OCA6	YDR067C	URB1	P34241	1764 aa	Known RBP	0.06	□□□□□ -2.4
OCA6	YDR067C	LHP1	P33399	275 aa	Known RBP	0.05	□□□□□ -2.4
OCA6	YDR067C	YBR016W	P38216	128 aa		0.05	□□□□□ -2.4
OCA6	YDR067C	RSM18	P40033	138 aa		0.05	□□□□□ -2.4
OCA6	YDR067C	EMC5	P40540	141 aa		0.05	□□□□□ -2.4
OCA6	YDR067C	TSC11	P40061	1430 aa		0.04	□□□□□ -2.4
OCA6	YDR067C	ROX3	P25046	220 aa		0.04	□□□□□ -2.4
OCA6	YDR067C	RPC10	P40422	70 aa		0.04	□□□□□ -2.4
OCA6	YDR067C	PAU5	P43575	122 aa		0.04	□□□□□ -2.4
OCA6	YDR067C	RPL38	P49167	78 aa	Known RBP	0.04	□□□□□ -2.4
OCA6	YDR067C	GEA1	P47102	1408 aa	Predicted RBP	0.04	□□□□□ -2.4
OCA6	YDR067C	BPT1	P14772	1559 aa		0.03	□□□□□ -2.4
OCA6	YDR067C	YFR009W-A	P0C5M9	85 aa		0.03	□□□□□ -2.4
OCA6	YDR067C	PAU1	P0CE88	120 aa		0.03	□□□□□ -2.4
OCA6	YDR067C	PAU14	P0CE89	120 aa		0.03	□□□□□ -2.4
OCA6	YDR067C	PAU6	P0CE90	120 aa		0.03	□□□□□ -2.4
OCA6	YDR067C	PAU18	P0CE91	120 aa		0.03	□□□□□ -2.4
OCA6	YDR067C	PAU8	P0CE92	120 aa		0.03	□□□□□ -2.4
OCA6	YDR067C	PAU11	P0CE93	120 aa		0.03	□□□□□ -2.4
OCA6	YDR067C	PAU13	P38725	120 aa		0.03	□□□□□ -2.4
OCA6	YDR067C	RGI1	P40043	161 aa	Predicted RBP	0.03	□□□□□ -2.4
OCA6	YDR067C	PAU10	Q03050	120 aa		0.03	□□□□□ -2.4
OCA6	YDR067C	PAU9	Q3E770	120 aa		0.03	□□□□□ -2.4
OCA6	YDR067C	YNR034W-A	Q3E841	98 aa		0.03	□□□□□ -2.4
OCA6	YDR067C	KRE5	P22023	1365 aa		0.03	□□□□□ -2.4
OCA6	YDR067C	TY3B-I	Q7LHG5	1498 aa	Known RBP	0.03	□□□□□ -2.41
OCA6	YDR067C	RIM15	P43565	1770 aa		0.02	□□□□□ -2.41
OCA6	YDR067C	YJR107C-A	P0CT86	78 aa		0.02	□□□□□ -2.41
OCA6	YDR067C	COX7	P10174	60 aa		0.02	□□□□□ -2.41
OCA6	YDR067C	YBL071C	P38185	102 aa		0.02	□□□□□ -2.41
OCA6	YDR067C	SGF11	Q03067	99 aa		0.02	□□□□□ -2.41
OCA6	YDR067C	KSH1	Q8TGJ3	72 aa		0.02	□□□□□ -2.41
OCA6	YDR067C	BUD4	P47136	1447 aa		0.02	□□□□□ -2.41
OCA6	YDR067C	HMRA1	P0CY11	126 aa		0.01	□□□□□ -2.41
OCA6	YDR067C	YER137C	P40083	148 aa	Known RBP	0.01	□□□□□ -2.41
OCA6	YDR067C	PAU4	P53427	120 aa		0.01	□□□□□ -2.41
OCA6	YDR067C	RSM19	P53733	91 aa	Predicted RBP	0.01	□□□□□ -2.41
OCA6	YDR067C	YOR289W	Q12012	251 aa	Predicted RBP	0.01	□□□□□ -2.41
OCA6	YDR067C	GEA2	P39993	1459 aa	Known RBP	0.01	□□□□□ -2.41
OCA6	YDR067C	MDS3	P53094	1487 aa		0.01	□□□□□ -2.41
OCA6	YDR067C	SNU13	P39990	126 aa	Known RBP	0	□□□□□ -2.41
OCA6	YDR067C	NTE1	Q04958	1679 aa		0	□□□□□ -2.41
OCA6	YDR067C	YNL042W-B	Q3E7Z2	85 aa		0	□□□□□ -2.41
OCA6	YDR067C	YRF1-2	P40105	1681 aa		-0.01	□□□□□ -2.41
OCA6	YDR067C	CAT8	P39113	1433 aa		-0.01	□□□□□ -2.41
OCA6	YDR067C	TOM6	P33448	61 aa		-0.01	□□□□□ -2.41
OCA6	YDR067C	YGR025W	P53216	100 aa		-0.01	□□□□□ -2.41
OCA6	YDR067C	NHP10	Q03435	203 aa		-0.01	□□□□□ -2.41
OCA6	YDR067C	YDR029W	Q12111	104 aa		-0.01	□□□□□ -2.41
OCA6	YDR067C	YKL068W-A	Q3E826	78 aa		-0.01	□□□□□ -2.41
OCA6	YDR067C	YIL134C-A	Q45U18	67 aa		-0.01	□□□□□ -2.41
OCA6	YDR067C	TY1B-BL	Q12490	1755 aa		-0.01	□□□□□ -2.41
OCA6	YDR067C	REV3	P14284	1504 aa		-0.02	□□□□□ -2.41

Retrieved 100 of 5,963 RNA–protein pairs in 29.7 ms