RNA–Protein interactions for RNA: ENST00000641213.1

PHGDH-211, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-211ENST00000641213 EIF2AQ9BY44 585 aaKnown RBP17.9■□□□□ 0.46
PHGDH-211ENST00000641213 GCOM2Q9BZD3 368 aaPredicted RBP17.9■□□□□ 0.46
PHGDH-211ENST00000641213 TBK1Q9UHD2 729 aa17.9■□□□□ 0.46
PHGDH-211ENST00000641213 NDC80O14777 642 aa17.89■□□□□ 0.45
PHGDH-211ENST00000641213 FASTKD3Q14CZ7 662 aaKnown RBP17.89■□□□□ 0.45
PHGDH-211ENST00000641213 STILQ15468 1287 aa17.89■□□□□ 0.45
PHGDH-211ENST00000641213 ZBTB6Q15916 424 aa17.89■□□□□ 0.45
PHGDH-211ENST00000641213 GOLGA7BQ2TAP0 167 aa17.89■□□□□ 0.45
PHGDH-211ENST00000641213 PPP1R26Q5T8A7 1209 aaPredicted RBP17.89■□□□□ 0.45
PHGDH-211ENST00000641213 RNF187Q5TA31 235 aaPredicted RBP17.89■□□□□ 0.45
PHGDH-211ENST00000641213 LRRC34Q8IZ02 419 aa17.89■□□□□ 0.45
PHGDH-211ENST00000641213 PPP1R13LQ8WUF5 828 aa17.89■□□□□ 0.45
PHGDH-211ENST00000641213 RXFP2Q8WXD0 754 aa17.89■□□□□ 0.45
PHGDH-211ENST00000641213 MIS12Q9H081 205 aa17.89■□□□□ 0.45
PHGDH-211ENST00000641213 GBA2Q9HCG7 927 aaPredicted RBP17.89■□□□□ 0.45
PHGDH-211ENST00000641213 SNX9Q9Y5X1 595 aa17.89■□□□□ 0.45
PHGDH-211ENST00000641213 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.89■□□□□ 0.45
PHGDH-211ENST00000641213 SMIM10L2AP0DMW4 78 aa17.89■□□□□ 0.45
PHGDH-211ENST00000641213 SMIM10L2BP0DMW5 78 aa17.89■□□□□ 0.45
PHGDH-211ENST00000641213 PDGFRAP16234 1089 aa17.89■□□□□ 0.45
PHGDH-211ENST00000641213 PDE4CQ08493 712 aa17.89■□□□□ 0.45
PHGDH-211ENST00000641213 RAB6CQ53S08 254 aa17.89■□□□□ 0.45
PHGDH-211ENST00000641213 HP1BP3Q5SSJ5 553 aaPredicted RBP17.89■□□□□ 0.45
PHGDH-211ENST00000641213 CYP4V2Q6ZWL3 525 aaPredicted RBP17.89■□□□□ 0.45
PHGDH-211ENST00000641213 APBB1IPQ7Z5R6 666 aaPredicted RBP17.89■□□□□ 0.45
PHGDH-211ENST00000641213 MICALL1Q8N3F8 863 aa17.89■□□□□ 0.45
PHGDH-211ENST00000641213 RAB6CQ9H0N0 254 aa17.89■□□□□ 0.45
PHGDH-211ENST00000641213 RSAD1Q9HA92 442 aa17.89■□□□□ 0.45
PHGDH-211ENST00000641213 TUBGCP4Q9UGJ1 667 aa17.89■□□□□ 0.45
PHGDH-211ENST00000641213 FARP1Q9Y4F1 1045 aaPredicted RBP17.89■□□□□ 0.45
PHGDH-211ENST00000641213 SLC15A5A6NIM6 579 aa17.88■□□□□ 0.45
PHGDH-211ENST00000641213 A6NJR5 290 aa17.88■□□□□ 0.45
PHGDH-211ENST00000641213 APOC4-APOC2K7ER74 178 aa17.88■□□□□ 0.45
PHGDH-211ENST00000641213 ALOX15BO15296 676 aa17.88■□□□□ 0.45
PHGDH-211ENST00000641213 DYNC1LI2O43237 492 aaPredicted RBP17.88■□□□□ 0.45
PHGDH-211ENST00000641213 ENDOD1O94919 500 aa17.88■□□□□ 0.45
PHGDH-211ENST00000641213 CPP00450 1065 aa17.88■□□□□ 0.45
PHGDH-211ENST00000641213 APOC2P02655 101 aa17.88■□□□□ 0.45
PHGDH-211ENST00000641213 RGS7P49802 495 aa17.88■□□□□ 0.45
PHGDH-211ENST00000641213 CDC42EP1Q00587 391 aa17.88■□□□□ 0.45
PHGDH-211ENST00000641213 C15orf59Q2T9L4 293 aaPredicted RBP17.88■□□□□ 0.45
PHGDH-211ENST00000641213 PKDCCQ504Y2 493 aa17.88■□□□□ 0.45
PHGDH-211ENST00000641213 SPRYD7Q5W111 196 aa17.88■□□□□ 0.45
PHGDH-211ENST00000641213 PCGF5Q86SE9 256 aa17.88■□□□□ 0.45
PHGDH-211ENST00000641213 ACOT1Q86TX2 421 aa17.88■□□□□ 0.45
PHGDH-211ENST00000641213 OSMRQ99650 979 aa17.88■□□□□ 0.45
PHGDH-211ENST00000641213 CALN1Q9BXU9 219 aa17.88■□□□□ 0.45
PHGDH-211ENST00000641213 KCNK9Q9NPC2 374 aa17.88■□□□□ 0.45
PHGDH-211ENST00000641213 HES2Q9Y543 173 aa17.88■□□□□ 0.45
PHGDH-211ENST00000641213 NME7Q9Y5B8 376 aa17.88■□□□□ 0.45
PHGDH-211ENST00000641213 GRAP2O75791 330 aa17.87■□□□□ 0.45
PHGDH-211ENST00000641213 BRAFP15056 766 aa17.87■□□□□ 0.45
PHGDH-211ENST00000641213 GCAP28676 217 aa17.87■□□□□ 0.45
PHGDH-211ENST00000641213 RPL22P35268 128 aaKnown RBP17.87■□□□□ 0.45
PHGDH-211ENST00000641213 CTCFP49711 727 aaPredicted RBP17.87■□□□□ 0.45
PHGDH-211ENST00000641213 FKBP1BP68106 108 aa17.87■□□□□ 0.45
PHGDH-211ENST00000641213 MPP2Q14168 576 aa17.87■□□□□ 0.45
PHGDH-211ENST00000641213 LRRC14Q15048 493 aa17.87■□□□□ 0.45
PHGDH-211ENST00000641213 PRAMEF19Q5SWL8 479 aa17.87■□□□□ 0.45
PHGDH-211ENST00000641213 PMF1Q6P1K2 205 aa17.87■□□□□ 0.45
PHGDH-211ENST00000641213 NOTUMQ6P988 496 aa17.87■□□□□ 0.45
PHGDH-211ENST00000641213 CENPUQ71F23 418 aa17.87■□□□□ 0.45
PHGDH-211ENST00000641213 PIGWQ7Z7B1 504 aa17.87■□□□□ 0.45
PHGDH-211ENST00000641213 TTC30AQ86WT1 665 aa17.87■□□□□ 0.45
PHGDH-211ENST00000641213 UNC45BQ8IWX7 931 aa17.87■□□□□ 0.45
PHGDH-211ENST00000641213 ZBED8Q8IZ13 594 aa17.87■□□□□ 0.45
PHGDH-211ENST00000641213 RIBC1Q8N443 379 aaPredicted RBP17.87■□□□□ 0.45
PHGDH-211ENST00000641213 MGARPQ8TDB4 240 aa17.87■□□□□ 0.45
PHGDH-211ENST00000641213 RSAD2Q8WXG1 361 aa17.87■□□□□ 0.45
PHGDH-211ENST00000641213 KAT2BQ92831 832 aa17.87■□□□□ 0.45
PHGDH-211ENST00000641213 C18orf25Q96B23 403 aaPredicted RBP17.87■□□□□ 0.45
PHGDH-211ENST00000641213 NRCAMQ92823 1304 aa17.87■□□□□ 0.45
PHGDH-211ENST00000641213 EXOC1LA0A1B0GW35 172 aa17.87■□□□□ 0.45
PHGDH-211ENST00000641213 F2P00734 622 aa17.87■□□□□ 0.45
PHGDH-211ENST00000641213 YARSP54577 528 aaKnown RBP17.87■□□□□ 0.45
PHGDH-211ENST00000641213 EIF3EP60228 445 aaKnown RBP17.87■□□□□ 0.45
PHGDH-211ENST00000641213 PDIA2Q13087 525 aaKnown RBP17.87■□□□□ 0.45
PHGDH-211ENST00000641213 MMRN1Q13201 1228 aa17.87■□□□□ 0.45
PHGDH-211ENST00000641213 ALKAL1Q6UXT8 129 aa17.87■□□□□ 0.45
PHGDH-211ENST00000641213 PPIL6Q8IXY8 311 aa17.87■□□□□ 0.45
PHGDH-211ENST00000641213 CPT1BQ92523 772 aa17.87■□□□□ 0.45
PHGDH-211ENST00000641213 MAML1Q92585 1016 aa17.87■□□□□ 0.45
PHGDH-211ENST00000641213 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.87■□□□□ 0.45
PHGDH-211ENST00000641213 FAM49BQ9NUQ9 324 aa17.87■□□□□ 0.45
PHGDH-211ENST00000641213 SMIM35A0A1B0GVV1 85 aa17.86■□□□□ 0.45
PHGDH-211ENST00000641213 MBLAC1A4D2B0 266 aaPredicted RBP17.86■□□□□ 0.45
PHGDH-211ENST00000641213 GOLGA8MH3BSY2 632 aa17.86■□□□□ 0.45
PHGDH-211ENST00000641213 FSBPO95073 299 aa17.86■□□□□ 0.45
PHGDH-211ENST00000641213 VIMP08670 466 aaKnown RBP17.86■□□□□ 0.45
PHGDH-211ENST00000641213 CYP2C9P11712 490 aa17.86■□□□□ 0.45
PHGDH-211ENST00000641213 DARSP14868 501 aaKnown RBP17.86■□□□□ 0.45
PHGDH-211ENST00000641213 CDH6P55285 790 aa17.86■□□□□ 0.45
PHGDH-211ENST00000641213 TMED2Q15363 201 aa17.86■□□□□ 0.45
PHGDH-211ENST00000641213 CDO1Q16878 200 aa17.86■□□□□ 0.45
PHGDH-211ENST00000641213 CCDC14Q49A88 953 aa17.86■□□□□ 0.45
PHGDH-211ENST00000641213 GLRA4Q5JXX5 417 aa17.86■□□□□ 0.45
PHGDH-211ENST00000641213 ANKRD22Q5VYY1 191 aa17.86■□□□□ 0.45
PHGDH-211ENST00000641213 CCDC121Q6ZUS5 278 aa17.86■□□□□ 0.45
PHGDH-211ENST00000641213 SRRM1Q8IYB3 904 aaKnown RBP17.86■□□□□ 0.45
PHGDH-211ENST00000641213 CCDC13Q8IYE1 715 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms