RNA–Protein interactions for RNA: ENST00000639418.1

SPIN3-221, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 2,860 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-221ENST00000639418 NRBP2Q9NSY0 501 aa13.79□□□□□ -0.2
SPIN3-221ENST00000639418 XPO7Q9UIA9 1087 aaKnown RBP13.79□□□□□ -0.2
SPIN3-221ENST00000639418 HACL1Q9UJ83 578 aa13.79□□□□□ -0.2
SPIN3-221ENST00000639418 E7ESA3 106 aa13.78□□□□□ -0.2
SPIN3-221ENST00000639418 CD48P09326 243 aa13.78□□□□□ -0.2
SPIN3-221ENST00000639418 TROVE2P10155 538 aaKnown RBP eCLIP13.78□□□□□ -0.2
SPIN3-221ENST00000639418 CD19P15391 556 aa13.78□□□□□ -0.2
SPIN3-221ENST00000639418 ZNF280AP59817 542 aaPredicted RBP13.78□□□□□ -0.2
SPIN3-221ENST00000639418 YWHAEP62258 255 aaKnown RBP13.78□□□□□ -0.2
SPIN3-221ENST00000639418 PLEKHG4Q58EX7 1191 aa13.78□□□□□ -0.2
SPIN3-221ENST00000639418 SPDYAQ5MJ70 313 aa13.78□□□□□ -0.2
SPIN3-221ENST00000639418 CWF19L1Q69YN2 538 aaKnown RBP13.78□□□□□ -0.2
SPIN3-221ENST00000639418 UNC45BQ8IWX7 931 aa13.78□□□□□ -0.2
SPIN3-221ENST00000639418 KIAA0319LQ8IZA0 1049 aa13.78□□□□□ -0.2
SPIN3-221ENST00000639418 BANPQ8N9N5 519 aa13.78□□□□□ -0.2
SPIN3-221ENST00000639418 WRNIP1Q96S55 665 aa13.78□□□□□ -0.2
SPIN3-221ENST00000639418 PCYT2Q99447 389 aa13.78□□□□□ -0.2
SPIN3-221ENST00000639418 SLC17A7Q9P2U7 560 aa13.78□□□□□ -0.2
SPIN3-221ENST00000639418 CYTH4Q9UIA0 394 aa13.78□□□□□ -0.2
SPIN3-221ENST00000639418 FZD1Q9UP38 647 aa13.78□□□□□ -0.2
SPIN3-221ENST00000639418 PCDHGA4Q9Y5G9 962 aa13.78□□□□□ -0.2
SPIN3-221ENST00000639418 OGTO15294 1046 aa13.78□□□□□ -0.2
SPIN3-221ENST00000639418 TM9SF1O15321 606 aa13.78□□□□□ -0.2
SPIN3-221ENST00000639418 TMEM63AO94886 807 aa13.78□□□□□ -0.2
SPIN3-221ENST00000639418 EFNA5P52803 228 aa13.78□□□□□ -0.2
SPIN3-221ENST00000639418 PSMC1P62191 440 aaKnown RBP13.78□□□□□ -0.2
SPIN3-221ENST00000639418 CNTN2Q02246 1040 aa13.78□□□□□ -0.2
SPIN3-221ENST00000639418 OVGP1Q12889 678 aa13.78□□□□□ -0.2
SPIN3-221ENST00000639418 SAMD7Q7Z3H4 446 aa13.78□□□□□ -0.2
SPIN3-221ENST00000639418 MFN1Q8IWA4 741 aa13.78□□□□□ -0.2
SPIN3-221ENST00000639418 PDIK1LQ8N165 341 aa13.78□□□□□ -0.2
SPIN3-221ENST00000639418 ZNF276Q8N554 614 aa13.78□□□□□ -0.2
SPIN3-221ENST00000639418 KCTD6Q8NC69 237 aa13.78□□□□□ -0.2
SPIN3-221ENST00000639418 STK32BQ9NY57 414 aa13.78□□□□□ -0.2
SPIN3-221ENST00000639418 DCTN4Q9UJW0 460 aa13.78□□□□□ -0.2
SPIN3-221ENST00000639418 PEX11AO75192 247 aa13.77□□□□□ -0.2
SPIN3-221ENST00000639418 SRGAP2CP0DJJ0 459 aa13.77□□□□□ -0.2
SPIN3-221ENST00000639418 IMPDH2P12268 514 aa13.77□□□□□ -0.2
SPIN3-221ENST00000639418 CALB2P22676 271 aa13.77□□□□□ -0.2
SPIN3-221ENST00000639418 PAPOLAP51003 745 aaKnown RBP13.77□□□□□ -0.2
SPIN3-221ENST00000639418 BASP1P80723 227 aaKnown RBP13.77□□□□□ -0.2
SPIN3-221ENST00000639418 DCAF15Q66K64 600 aa13.77□□□□□ -0.2
SPIN3-221ENST00000639418 CATSPERGQ6ZRH7 1159 aa13.77□□□□□ -0.2
SPIN3-221ENST00000639418 CLNKQ7Z7G1 428 aa13.77□□□□□ -0.2
SPIN3-221ENST00000639418 RFX6Q8HWS3 928 aa13.77□□□□□ -0.2
SPIN3-221ENST00000639418 EMC1Q8N766 993 aa13.77□□□□□ -0.2
SPIN3-221ENST00000639418 FAM71DQ8N9W8 422 aa13.77□□□□□ -0.2
SPIN3-221ENST00000639418 RFWD2Q8NHY2 731 aa13.77□□□□□ -0.2
SPIN3-221ENST00000639418 ZNF398Q8TD17 642 aa13.77□□□□□ -0.2
SPIN3-221ENST00000639418 JDP2Q8WYK2 163 aa13.77□□□□□ -0.2
SPIN3-221ENST00000639418 C12orf42Q96LP6 360 aa13.77□□□□□ -0.2
SPIN3-221ENST00000639418 ACO2Q99798 780 aaKnown RBP13.77□□□□□ -0.2
SPIN3-221ENST00000639418 EPAS1Q99814 870 aa13.77□□□□□ -0.2
SPIN3-221ENST00000639418 PDGFDQ9GZP0 370 aaPredicted RBP13.77□□□□□ -0.2
SPIN3-221ENST00000639418 MANSC1Q9H8J5 431 aa13.77□□□□□ -0.2
SPIN3-221ENST00000639418 NXF1Q9UBU9 619 aaKnown RBP13.77□□□□□ -0.2
SPIN3-221ENST00000639418 PCSK1NQ9UHG2 260 aa13.77□□□□□ -0.2
SPIN3-221ENST00000639418 CPSF3Q9UKF6 684 aaKnown RBP13.77□□□□□ -0.2
SPIN3-221ENST00000639418 TRAFD1O14545 582 aaPredicted RBP13.77□□□□□ -0.21
SPIN3-221ENST00000639418 MAFO75444 373 aaPredicted RBP13.77□□□□□ -0.21
SPIN3-221ENST00000639418 GM2AP17900 193 aa13.77□□□□□ -0.21
SPIN3-221ENST00000639418 GNAZP19086 355 aa13.77□□□□□ -0.21
SPIN3-221ENST00000639418 UBA1P22314 1058 aaKnown RBP13.77□□□□□ -0.21
SPIN3-221ENST00000639418 STAT5BP51692 787 aa13.77□□□□□ -0.21
SPIN3-221ENST00000639418 EIF3EP60228 445 aaKnown RBP13.77□□□□□ -0.21
SPIN3-221ENST00000639418 TAZQ16635 292 aa13.77□□□□□ -0.21
SPIN3-221ENST00000639418 ALKBH8Q96BT7 664 aaKnown RBP13.77□□□□□ -0.21
SPIN3-221ENST00000639418 XYLT2Q9H1B5 865 aa13.77□□□□□ -0.21
SPIN3-221ENST00000639418 VPS11Q9H270 941 aa13.77□□□□□ -0.21
SPIN3-221ENST00000639418 SYNCQ9H7C4 482 aa13.77□□□□□ -0.21
SPIN3-221ENST00000639418 METTL5Q9NRN9 209 aaKnown RBP13.77□□□□□ -0.21
SPIN3-221ENST00000639418 CORO1CQ9ULV4 474 aaPredicted RBP13.77□□□□□ -0.21
SPIN3-221ENST00000639418 POLIQ9UNA4 740 aa13.77□□□□□ -0.21
SPIN3-221ENST00000639418 NUMBLQ9Y6R0 609 aa13.77□□□□□ -0.21
SPIN3-221ENST00000639418 MED7O43513 233 aa13.77□□□□□ -0.21
SPIN3-221ENST00000639418 ITGBL1O95965 494 aaPredicted RBP13.77□□□□□ -0.21
SPIN3-221ENST00000639418 PTPN4P29074 926 aa13.77□□□□□ -0.21
SPIN3-221ENST00000639418 RAP1GAPP47736 663 aa13.77□□□□□ -0.21
SPIN3-221ENST00000639418 TAF11Q15544 211 aa13.77□□□□□ -0.21
SPIN3-221ENST00000639418 FNIP1Q8TF40 1166 aa13.77□□□□□ -0.21
SPIN3-221ENST00000639418 STK32AQ8WU08 396 aa13.77□□□□□ -0.21
SPIN3-221ENST00000639418 HSPH1Q92598 858 aa13.77□□□□□ -0.21
SPIN3-221ENST00000639418 NUDCD1Q96RS6 583 aa13.77□□□□□ -0.21
SPIN3-221ENST00000639418 LHX5Q9H2C1 402 aa13.77□□□□□ -0.21
SPIN3-221ENST00000639418 ALG13Q9NP73 1137 aaKnown RBP13.77□□□□□ -0.21
SPIN3-221ENST00000639418 SAR1AQ9NR31 198 aa13.77□□□□□ -0.21
SPIN3-221ENST00000639418 CHMP2BQ9UQN3 213 aa13.77□□□□□ -0.21
SPIN3-221ENST00000639418 LCTP09848 1927 aa13.76□□□□□ -0.21
SPIN3-221ENST00000639418 FARP2O94887 1054 aaPredicted RBP13.76□□□□□ -0.21
SPIN3-221ENST00000639418 MT-ND3P03897 115 aa13.76□□□□□ -0.21
SPIN3-221ENST00000639418 HOXC6P09630 235 aa13.76□□□□□ -0.21
SPIN3-221ENST00000639418 HIRAP54198 1017 aaPredicted RBP13.76□□□□□ -0.21
SPIN3-221ENST00000639418 SURF1Q15526 300 aa13.76□□□□□ -0.21
SPIN3-221ENST00000639418 TAF5Q15542 800 aa13.76□□□□□ -0.21
SPIN3-221ENST00000639418 CTC1Q2NKJ3 1217 aa13.76□□□□□ -0.21
SPIN3-221ENST00000639418 DNERQ8NFT8 737 aa13.76□□□□□ -0.21
SPIN3-221ENST00000639418 CPXM1Q96SM3 734 aa13.76□□□□□ -0.21
SPIN3-221ENST00000639418 CYTH2Q99418 400 aa13.76□□□□□ -0.21
SPIN3-221ENST00000639418 PAPOLBQ9NRJ5 636 aaKnown RBP13.76□□□□□ -0.21
SPIN3-221ENST00000639418 KANSL3Q9P2N6 904 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms