RNA–Protein interactions for RNA: ENST00000638663.1

SCARB2-212, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 1,922 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-212ENST00000638663 ZNF333Q96JL9 665 aa22.81■■□□□ 1.24
SCARB2-212ENST00000638663 HERPUD2Q9BSE4 406 aa22.81■■□□□ 1.24
SCARB2-212ENST00000638663 CDH9Q9ULB4 789 aa22.81■■□□□ 1.24
SCARB2-212ENST00000638663 M0QZQ0 153 aa22.8■■□□□ 1.24
SCARB2-212ENST00000638663 XPO1O14980 1071 aaKnown RBP22.8■■□□□ 1.24
SCARB2-212ENST00000638663 PHF2O75151 1096 aa22.8■■□□□ 1.24
SCARB2-212ENST00000638663 PDGFRAP16234 1089 aa22.8■■□□□ 1.24
SCARB2-212ENST00000638663 PCSK1P29120 753 aa22.8■■□□□ 1.24
SCARB2-212ENST00000638663 ZNF143P52747 638 aaPredicted RBP22.8■■□□□ 1.24
SCARB2-212ENST00000638663 SLC8A3P57103 927 aa22.8■■□□□ 1.24
SCARB2-212ENST00000638663 SMC1AQ14683 1233 aaKnown RBP22.8■■□□□ 1.24
SCARB2-212ENST00000638663 PPP2R5EQ16537 467 aa22.8■■□□□ 1.24
SCARB2-212ENST00000638663 IFT20Q8IY31 132 aa22.8■■□□□ 1.24
SCARB2-212ENST00000638663 CLEC4CQ8WTT0 213 aa22.8■■□□□ 1.24
SCARB2-212ENST00000638663 HSFY1Q96LI6 401 aa22.8■■□□□ 1.24
SCARB2-212ENST00000638663 RTP3Q9BQQ7 232 aa22.8■■□□□ 1.24
SCARB2-212ENST00000638663 HEMGNQ9BXL5 484 aa22.8■■□□□ 1.24
SCARB2-212ENST00000638663 KANSL3Q9P2N6 904 aa22.8■■□□□ 1.24
SCARB2-212ENST00000638663 PCDHB7Q9Y5E2 793 aa22.8■■□□□ 1.24
SCARB2-212ENST00000638663 TET1Q8NFU7 2136 aa22.8■■□□□ 1.24
SCARB2-212ENST00000638663 TTI1O43156 1089 aa22.8■■□□□ 1.24
SCARB2-212ENST00000638663 BEST1O76090 585 aa22.8■■□□□ 1.24
SCARB2-212ENST00000638663 CYP11A1P05108 521 aa22.8■■□□□ 1.24
SCARB2-212ENST00000638663 RALAP11233 206 aa22.8■■□□□ 1.24
SCARB2-212ENST00000638663 COL6A1P12109 1028 aa22.8■■□□□ 1.24
SCARB2-212ENST00000638663 NPR3P17342 541 aa22.8■■□□□ 1.24
SCARB2-212ENST00000638663 RPL34P49207 117 aaKnown RBP22.8■■□□□ 1.24
SCARB2-212ENST00000638663 MAATS1Q7Z4T9 603 aa22.8■■□□□ 1.24
SCARB2-212ENST00000638663 ANKS1BQ7Z6G8 1248 aa22.8■■□□□ 1.24
SCARB2-212ENST00000638663 PIGZQ86VD9 579 aa22.8■■□□□ 1.24
SCARB2-212ENST00000638663 ZDHHC17Q8IUH5 632 aa22.8■■□□□ 1.24
SCARB2-212ENST00000638663 APBB2Q92870 758 aa22.8■■□□□ 1.24
SCARB2-212ENST00000638663 KHSRPQ92945 711 aaKnown RBP eCLIP22.8■■□□□ 1.24
SCARB2-212ENST00000638663 MAGOHBQ96A72 148 aaKnown RBP22.8■■□□□ 1.24
SCARB2-212ENST00000638663 ELAC1Q9H777 363 aaKnown RBP22.8■■□□□ 1.24
SCARB2-212ENST00000638663 ZWILCHQ9H900 591 aa22.8■■□□□ 1.24
SCARB2-212ENST00000638663 GDF3Q9NR23 364 aa22.8■■□□□ 1.24
SCARB2-212ENST00000638663 KRT82Q9NSB4 513 aa22.8■■□□□ 1.24
SCARB2-212ENST00000638663 ASNSD1Q9NWL6 643 aa22.8■■□□□ 1.24
SCARB2-212ENST00000638663 RNF8O76064 485 aa22.79■■□□□ 1.24
SCARB2-212ENST00000638663 PAX3P23760 479 aa22.79■■□□□ 1.24
SCARB2-212ENST00000638663 ACADSBP45954 432 aa22.79■■□□□ 1.24
SCARB2-212ENST00000638663 OR1G1P47890 313 aa22.79■■□□□ 1.24
SCARB2-212ENST00000638663 PLCB3Q01970 1234 aa22.79■■□□□ 1.24
SCARB2-212ENST00000638663 SLC25A11Q02978 314 aaKnown RBP22.79■■□□□ 1.24
SCARB2-212ENST00000638663 CTU1Q7Z7A3 348 aaKnown RBP22.79■■□□□ 1.24
SCARB2-212ENST00000638663 COLGALT2Q8IYK4 626 aa22.79■■□□□ 1.24
SCARB2-212ENST00000638663 RCOR2Q8IZ40 523 aa22.79■■□□□ 1.24
SCARB2-212ENST00000638663 ABI1Q8IZP0 508 aa22.79■■□□□ 1.24
SCARB2-212ENST00000638663 PCED1BQ96HM7 432 aa22.79■■□□□ 1.24
SCARB2-212ENST00000638663 SUSD3Q96L08 255 aa22.79■■□□□ 1.24
SCARB2-212ENST00000638663 FAM193BQ96PV7 902 aaPredicted RBP22.79■■□□□ 1.24
SCARB2-212ENST00000638663 CNPY3Q9BT09 278 aa22.79■■□□□ 1.24
SCARB2-212ENST00000638663 CYLDQ9NQC7 956 aa22.79■■□□□ 1.24
SCARB2-212ENST00000638663 DSEQ9UL01 958 aa22.79■■□□□ 1.24
SCARB2-212ENST00000638663 SCN5AQ14524 2016 aa22.79■■□□□ 1.24
SCARB2-212ENST00000638663 FAM200BP0CF97 657 aa22.78■■□□□ 1.24
SCARB2-212ENST00000638663 IL1R2P27930 398 aa22.78■■□□□ 1.24
SCARB2-212ENST00000638663 CYP2C18P33260 490 aa22.78■■□□□ 1.24
SCARB2-212ENST00000638663 ACAP1Q15027 740 aa22.78■■□□□ 1.24
SCARB2-212ENST00000638663 HADHQ16836 314 aaKnown RBP22.78■■□□□ 1.24
SCARB2-212ENST00000638663 C15orf59Q2T9L4 293 aaPredicted RBP22.78■■□□□ 1.24
SCARB2-212ENST00000638663 SMTNL2Q2TAL5 461 aa22.78■■□□□ 1.24
SCARB2-212ENST00000638663 MAP9Q49MG5 647 aa22.78■■□□□ 1.24
SCARB2-212ENST00000638663 SH3PXD2AQ5TCZ1 1133 aa22.78■■□□□ 1.24
SCARB2-212ENST00000638663 CLEC20AQ6ZU45 233 aa22.78■■□□□ 1.24
SCARB2-212ENST00000638663 MYCBPAPQ8TBZ2 947 aa22.78■■□□□ 1.24
SCARB2-212ENST00000638663 IFT81Q8WYA0 676 aa22.78■■□□□ 1.24
SCARB2-212ENST00000638663 RBM41Q96IZ5 413 aaKnown RBP22.78■■□□□ 1.24
SCARB2-212ENST00000638663 SLITRK1Q96PX8 696 aa22.78■■□□□ 1.24
SCARB2-212ENST00000638663 OSBPL8Q9BZF1 889 aa22.78■■□□□ 1.24
SCARB2-212ENST00000638663 DDX56Q9NY93 547 aaKnown RBP22.78■■□□□ 1.24
SCARB2-212ENST00000638663 DNAJB4Q9UDY4 337 aa22.78■■□□□ 1.24
SCARB2-212ENST00000638663 PCSK1NQ9UHG2 260 aa22.78■■□□□ 1.24
SCARB2-212ENST00000638663 LRFN2Q9ULH4 789 aa22.78■■□□□ 1.24
SCARB2-212ENST00000638663 PRG3Q9Y2Y8 225 aaPredicted RBP22.78■■□□□ 1.24
SCARB2-212ENST00000638663 MIPP30301 263 aa22.78■■□□□ 1.24
SCARB2-212ENST00000638663 CHRNA3P32297 505 aa22.78■■□□□ 1.24
SCARB2-212ENST00000638663 GATMP50440 423 aa22.78■■□□□ 1.24
SCARB2-212ENST00000638663 MAP3K7CLP57077 242 aa22.78■■□□□ 1.24
SCARB2-212ENST00000638663 DR1Q01658 176 aa22.78■■□□□ 1.24
SCARB2-212ENST00000638663 TRADDQ15628 312 aa22.78■■□□□ 1.24
SCARB2-212ENST00000638663 ODF2Q5BJF6 829 aa22.78■■□□□ 1.24
SCARB2-212ENST00000638663 TTC27Q6P3X3 843 aa22.78■■□□□ 1.24
SCARB2-212ENST00000638663 FBXO46Q6PJ61 603 aaPredicted RBP22.78■■□□□ 1.24
SCARB2-212ENST00000638663 MFSD7Q6UXD7 560 aa22.78■■□□□ 1.24
SCARB2-212ENST00000638663 POLNQ7Z5Q5 900 aa22.78■■□□□ 1.24
SCARB2-212ENST00000638663 FAM35AQ86V20 835 aa22.78■■□□□ 1.24
SCARB2-212ENST00000638663 SPATA18Q8TC71 538 aa22.78■■□□□ 1.24
SCARB2-212ENST00000638663 CASKIN2Q8WXE0 1202 aa22.78■■□□□ 1.24
SCARB2-212ENST00000638663 RAPGEF5Q92565 580 aa22.78■■□□□ 1.24
SCARB2-212ENST00000638663 CFAP57Q96MR6 1250 aa22.78■■□□□ 1.24
SCARB2-212ENST00000638663 TSC2P49815 1807 aa22.78■■□□□ 1.24
SCARB2-212ENST00000638663 TNFRSF8P28908 595 aa22.77■■□□□ 1.24
SCARB2-212ENST00000638663 CETN2P41208 172 aa22.77■■□□□ 1.24
SCARB2-212ENST00000638663 CARSP49589 748 aaKnown RBP22.77■■□□□ 1.24
SCARB2-212ENST00000638663 CYP1B1Q16678 543 aa22.77■■□□□ 1.24
SCARB2-212ENST00000638663 CDO1Q16878 200 aa22.77■■□□□ 1.24
SCARB2-212ENST00000638663 CCDC14Q49A88 953 aa22.77■■□□□ 1.24
SCARB2-212ENST00000638663 RAB6CQ53S08 254 aa22.77■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms