RNA–Protein interactions for RNA: ENST00000638573.1

COLCA2-206, Transcript of colorectal cancer associated 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene COLCA2, Length 1,080 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2-206ENST00000638573 MIA3Q5JRA6 1907 aa17.51■□□□□ 0.39
COLCA2-206ENST00000638573 SCAMP3O14828 347 aaKnown RBP17.5■□□□□ 0.39
COLCA2-206ENST00000638573 IKBKBO14920 756 aa17.5■□□□□ 0.39
COLCA2-206ENST00000638573 STX10O60499 249 aa17.5■□□□□ 0.39
COLCA2-206ENST00000638573 FGF19O95750 216 aa17.5■□□□□ 0.39
COLCA2-206ENST00000638573 RPL10AP62906 217 aaKnown RBP17.5■□□□□ 0.39
COLCA2-206ENST00000638573 SATB1Q01826 763 aa17.5■□□□□ 0.39
COLCA2-206ENST00000638573 TPD52L1Q16890 204 aaPredicted RBP17.5■□□□□ 0.39
COLCA2-206ENST00000638573 DPCR1Q3MIW9 517 aa17.5■□□□□ 0.39
COLCA2-206ENST00000638573 CFAP221Q4G0U5 840 aa17.5■□□□□ 0.39
COLCA2-206ENST00000638573 CCDC40Q4G0X9 1142 aa17.5■□□□□ 0.39
COLCA2-206ENST00000638573 SPOPLQ6IQ16 392 aa17.5■□□□□ 0.39
COLCA2-206ENST00000638573 CAVIN1Q6NZI2 390 aaKnown RBP17.5■□□□□ 0.39
COLCA2-206ENST00000638573 PKN3Q6P5Z2 889 aa17.5■□□□□ 0.39
COLCA2-206ENST00000638573 RBM43Q6ZSC3 357 aaKnown RBP17.5■□□□□ 0.39
COLCA2-206ENST00000638573 ARL14EPQ8N8R7 260 aaPredicted RBP17.5■□□□□ 0.39
COLCA2-206ENST00000638573 CHRDQ9H2X0 955 aa17.5■□□□□ 0.39
COLCA2-206ENST00000638573 EBF3Q9H4W6 596 aa17.5■□□□□ 0.39
COLCA2-206ENST00000638573 METTL14Q9HCE5 456 aaKnown RBP17.5■□□□□ 0.39
COLCA2-206ENST00000638573 HMGXB4Q9UGU5 601 aa17.5■□□□□ 0.39
COLCA2-206ENST00000638573 GPR179Q6PRD1 2367 aa17.5■□□□□ 0.39
COLCA2-206ENST00000638573 PATJQ8NI35 1801 aa17.49■□□□□ 0.39
COLCA2-206ENST00000638573 F8VP50 259 aa17.49■□□□□ 0.39
COLCA2-206ENST00000638573 MAN2B1O00754 1011 aa17.49■□□□□ 0.39
COLCA2-206ENST00000638573 GNA14O95837 355 aa17.49■□□□□ 0.39
COLCA2-206ENST00000638573 C4BPAP04003 597 aaKnown RBP17.49■□□□□ 0.39
COLCA2-206ENST00000638573 TDGF1P13385 188 aa17.49■□□□□ 0.39
COLCA2-206ENST00000638573 GNL1P36915 607 aaPredicted RBP17.49■□□□□ 0.39
COLCA2-206ENST00000638573 RPS9P46781 194 aaKnown RBP17.49■□□□□ 0.39
COLCA2-206ENST00000638573 TNNC1P63316 161 aa17.49■□□□□ 0.39
COLCA2-206ENST00000638573 CLDN10P78369 228 aa17.49■□□□□ 0.39
COLCA2-206ENST00000638573 ZXDBP98169 803 aa17.49■□□□□ 0.39
COLCA2-206ENST00000638573 KLHL40Q2TBA0 621 aa17.49■□□□□ 0.39
COLCA2-206ENST00000638573 DCAF17Q5H9S7 520 aaPredicted RBP17.49■□□□□ 0.39
COLCA2-206ENST00000638573 TCERG1LQ5VWI1 586 aa17.49■□□□□ 0.39
COLCA2-206ENST00000638573 DPH6Q7L8W6 267 aa17.49■□□□□ 0.39
COLCA2-206ENST00000638573 FILIP1Q7Z7B0 1213 aa17.49■□□□□ 0.39
COLCA2-206ENST00000638573 MON1AQ86VX9 555 aa17.49■□□□□ 0.39
COLCA2-206ENST00000638573 MRPS31Q92665 395 aaKnown RBP17.49■□□□□ 0.39
COLCA2-206ENST00000638573 E2F7Q96AV8 911 aa17.49■□□□□ 0.39
COLCA2-206ENST00000638573 B3GNT5Q9BYG0 378 aa17.49■□□□□ 0.39
COLCA2-206ENST00000638573 SNX25Q9H3E2 840 aa17.49■□□□□ 0.39
COLCA2-206ENST00000638573 PRMT8Q9NR22 394 aaPredicted RBP17.49■□□□□ 0.39
COLCA2-206ENST00000638573 MAGEC2Q9UBF1 373 aaPredicted RBP17.49■□□□□ 0.39
COLCA2-206ENST00000638573 ARMCX3Q9UH62 379 aaPredicted RBP17.49■□□□□ 0.39
COLCA2-206ENST00000638573 MRPS17Q9Y2R5 130 aaKnown RBP17.49■□□□□ 0.39
COLCA2-206ENST00000638573 ANTXRLA6NF34 631 aa17.48■□□□□ 0.39
COLCA2-206ENST00000638573 LMNAP02545 664 aaKnown RBP17.48■□□□□ 0.39
COLCA2-206ENST00000638573 TRIM49P0CI25 452 aa17.48■□□□□ 0.39
COLCA2-206ENST00000638573 TRIM49CP0CI26 452 aa17.48■□□□□ 0.39
COLCA2-206ENST00000638573 PTPN1P18031 435 aaKnown RBP17.48■□□□□ 0.39
COLCA2-206ENST00000638573 AVPR1AP37288 418 aa17.48■□□□□ 0.39
COLCA2-206ENST00000638573 GRIK1P39086 918 aa17.48■□□□□ 0.39
COLCA2-206ENST00000638573 IFRD2Q12894 506 aaPredicted RBP17.48■□□□□ 0.39
COLCA2-206ENST00000638573 STX1AQ16623 288 aa17.48■□□□□ 0.39
COLCA2-206ENST00000638573 ARHGAP29Q52LW3 1261 aa17.48■□□□□ 0.39
COLCA2-206ENST00000638573 CT47A1Q5JQC4 288 aaPredicted RBP17.48■□□□□ 0.39
COLCA2-206ENST00000638573 CELF5Q8N6W0 485 aaKnown RBP17.48■□□□□ 0.39
COLCA2-206ENST00000638573 SUMF1Q8NBK3 374 aa17.48■□□□□ 0.39
COLCA2-206ENST00000638573 MYCBPAPQ8TBZ2 947 aa17.48■□□□□ 0.39
COLCA2-206ENST00000638573 SPATA18Q8TC71 538 aa17.48■□□□□ 0.39
COLCA2-206ENST00000638573 MYRFLQ96LU7 910 aa17.48■□□□□ 0.39
COLCA2-206ENST00000638573 NELL2Q99435 816 aa17.48■□□□□ 0.39
COLCA2-206ENST00000638573 DUSP9Q99956 384 aaKnown RBP17.48■□□□□ 0.39
COLCA2-206ENST00000638573 FAM83CQ9BQN1 747 aa17.48■□□□□ 0.39
COLCA2-206ENST00000638573 MMRN2Q9H8L6 949 aa17.48■□□□□ 0.39
COLCA2-206ENST00000638573 FBRSL1Q9HCM7 1045 aaKnown RBP17.48■□□□□ 0.39
COLCA2-206ENST00000638573 TDP1Q9NUW8 608 aa17.48■□□□□ 0.39
COLCA2-206ENST00000638573 ANO10Q9NW15 660 aa17.48■□□□□ 0.39
COLCA2-206ENST00000638573 OBP2AQ9NY56 170 aa17.48■□□□□ 0.39
COLCA2-206ENST00000638573 GCNT4Q9P109 453 aa17.48■□□□□ 0.39
COLCA2-206ENST00000638573 TMEM63CQ9P1W3 806 aa17.48■□□□□ 0.39
COLCA2-206ENST00000638573 WNT6Q9Y6F9 365 aa17.48■□□□□ 0.39
COLCA2-206ENST00000638573 CFAP54Q96N23 3096 aa17.47■□□□□ 0.39
COLCA2-206ENST00000638573 PTPRZ1P23471 2315 aaPredicted RBP17.47■□□□□ 0.39
COLCA2-206ENST00000638573 A8MXQ7 604 aa17.47■□□□□ 0.39
COLCA2-206ENST00000638573 TACC1O75410 805 aa17.47■□□□□ 0.39
COLCA2-206ENST00000638573 ERCC5P28715 1186 aaPredicted RBP17.47■□□□□ 0.39
COLCA2-206ENST00000638573 ATICP31939 592 aa17.47■□□□□ 0.39
COLCA2-206ENST00000638573 GTF2H1P32780 548 aa17.47■□□□□ 0.39
COLCA2-206ENST00000638573 PIK3CAP42336 1068 aa17.47■□□□□ 0.39
COLCA2-206ENST00000638573 MAGEA11P43364 429 aa17.47■□□□□ 0.39
COLCA2-206ENST00000638573 SRSF5Q13243 272 aaKnown RBP17.47■□□□□ 0.39
COLCA2-206ENST00000638573 NCOA4Q13772 614 aa17.47■□□□□ 0.39
COLCA2-206ENST00000638573 SKOR2Q2VWA4 1001 aaPredicted RBP17.47■□□□□ 0.39
COLCA2-206ENST00000638573 ZNF699Q32M78 642 aa17.47■□□□□ 0.39
COLCA2-206ENST00000638573 C4orf50Q6ZRC1 276 aa17.47■□□□□ 0.39
COLCA2-206ENST00000638573 CCDC150Q8NCX0 1101 aa17.47■□□□□ 0.39
COLCA2-206ENST00000638573 TRMT2BQ96GJ1 504 aaKnown RBP17.47■□□□□ 0.39
COLCA2-206ENST00000638573 FUBP3Q96I24 572 aaKnown RBP eCLIP17.47■□□□□ 0.39
COLCA2-206ENST00000638573 SRRTQ9BXP5 876 aaKnown RBP17.47■□□□□ 0.39
COLCA2-206ENST00000638573 IMPG2Q9BZV3 1241 aa17.47■□□□□ 0.39
COLCA2-206ENST00000638573 FBXO4Q9UKT5 387 aa17.47■□□□□ 0.39
COLCA2-206ENST00000638573 RIF1Q5UIP0 2472 aaKnown RBP17.46■□□□□ 0.39
COLCA2-206ENST00000638573 NUP210Q8TEM1 1887 aaPredicted RBP17.46■□□□□ 0.39
COLCA2-206ENST00000638573 NCAM2O15394 837 aa17.46■□□□□ 0.39
COLCA2-206ENST00000638573 LETM1O95202 739 aaPredicted RBP17.46■□□□□ 0.39
COLCA2-206ENST00000638573 CCDC192P0DO97 292 aa17.46■□□□□ 0.39
COLCA2-206ENST00000638573 WEE1P30291 646 aa17.46■□□□□ 0.39
COLCA2-206ENST00000638573 GCLMP48507 274 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms