RNA–Protein interactions for RNA: ENST00000638114.1

CACNA1A-259, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 3

Gene CACNA1A, Length 517 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-259ENST00000638114 ENPEPQ07075 957 aa17.82■□□□□ 0.44
CACNA1A-259ENST00000638114 IFRD2Q12894 506 aaPredicted RBP17.82■□□□□ 0.44
CACNA1A-259ENST00000638114 ORC1Q13415 861 aa17.82■□□□□ 0.44
CACNA1A-259ENST00000638114 FZD5Q13467 585 aa17.82■□□□□ 0.44
CACNA1A-259ENST00000638114 ZNF268Q14587 947 aaPredicted RBP17.82■□□□□ 0.44
CACNA1A-259ENST00000638114 CC2D1AQ6P1N0 951 aaPredicted RBP17.82■□□□□ 0.44
CACNA1A-259ENST00000638114 C1orf228Q6PIY5 440 aa17.82■□□□□ 0.44
CACNA1A-259ENST00000638114 ACOT1Q86TX2 421 aa17.82■□□□□ 0.44
CACNA1A-259ENST00000638114 FAM35AQ86V20 835 aa17.82■□□□□ 0.44
CACNA1A-259ENST00000638114 RALGPS2Q86X27 583 aaPredicted RBP17.82■□□□□ 0.44
CACNA1A-259ENST00000638114 MAML2Q8IZL2 1156 aaPredicted RBP17.82■□□□□ 0.44
CACNA1A-259ENST00000638114 ZNF687Q8N1G0 1237 aa17.82■□□□□ 0.44
CACNA1A-259ENST00000638114 ARL14EPQ8N8R7 260 aaPredicted RBP17.82■□□□□ 0.44
CACNA1A-259ENST00000638114 TAS1R2Q8TE23 839 aa17.82■□□□□ 0.44
CACNA1A-259ENST00000638114 NKD2Q969F2 451 aaPredicted RBP17.82■□□□□ 0.44
CACNA1A-259ENST00000638114 SLC22A12Q96S37 553 aa17.82■□□□□ 0.44
CACNA1A-259ENST00000638114 CYP2S1Q96SQ9 504 aa17.82■□□□□ 0.44
CACNA1A-259ENST00000638114 TSG101Q99816 390 aa17.82■□□□□ 0.44
CACNA1A-259ENST00000638114 TTLL2Q9BWV7 592 aa17.82■□□□□ 0.44
CACNA1A-259ENST00000638114 LMAN1LQ9HAT1 526 aa17.82■□□□□ 0.44
CACNA1A-259ENST00000638114 TMEM30AQ9NV96 361 aa17.82■□□□□ 0.44
CACNA1A-259ENST00000638114 TRPM5Q9NZQ8 1165 aa17.82■□□□□ 0.44
CACNA1A-259ENST00000638114 R4GN57 208 aa17.82■□□□□ 0.44
CACNA1A-259ENST00000638114 MYO15AQ9UKN7 3530 aa17.81■□□□□ 0.44
CACNA1A-259ENST00000638114 C2orf78A6NCI8 922 aa17.81■□□□□ 0.44
CACNA1A-259ENST00000638114 KINO60870 393 aaKnown RBP17.81■□□□□ 0.44
CACNA1A-259ENST00000638114 CTHP32929 405 aa17.81■□□□□ 0.44
CACNA1A-259ENST00000638114 NDST1P52848 882 aa17.81■□□□□ 0.44
CACNA1A-259ENST00000638114 NOP14P78316 857 aaKnown RBP17.81■□□□□ 0.44
CACNA1A-259ENST00000638114 ITPRIPL2Q3MIP1 535 aa17.81■□□□□ 0.44
CACNA1A-259ENST00000638114 COBLL1Q53SF7 1204 aa17.81■□□□□ 0.44
CACNA1A-259ENST00000638114 ASCL5Q7RTU5 278 aa17.81■□□□□ 0.44
CACNA1A-259ENST00000638114 CCDC150Q8NCX0 1101 aa17.81■□□□□ 0.44
CACNA1A-259ENST00000638114 SPATA20Q8TB22 786 aa17.81■□□□□ 0.44
CACNA1A-259ENST00000638114 RIN3Q8TB24 985 aa17.81■□□□□ 0.44
CACNA1A-259ENST00000638114 GTPBP4Q9BZE4 634 aaKnown RBP17.81■□□□□ 0.44
CACNA1A-259ENST00000638114 TMEM8AQ9HCN3 771 aa17.81■□□□□ 0.44
CACNA1A-259ENST00000638114 HMGXB4Q9UGU5 601 aa17.81■□□□□ 0.44
CACNA1A-259ENST00000638114 CIZ1Q9ULV3 898 aaPredicted RBP17.81■□□□□ 0.44
CACNA1A-259ENST00000638114 USP34Q70CQ2 3546 aa17.8■□□□□ 0.44
CACNA1A-259ENST00000638114 PRR23AA6NEV1 266 aa17.8■□□□□ 0.44
CACNA1A-259ENST00000638114 ABL1P00519 1130 aa17.8■□□□□ 0.44
CACNA1A-259ENST00000638114 HDCP19113 662 aa17.8■□□□□ 0.44
CACNA1A-259ENST00000638114 GTF2H1P32780 548 aa17.8■□□□□ 0.44
CACNA1A-259ENST00000638114 PDE6CP51160 858 aa17.8■□□□□ 0.44
CACNA1A-259ENST00000638114 CSTF1Q05048 431 aaKnown RBP17.8■□□□□ 0.44
CACNA1A-259ENST00000638114 MTAPQ13126 283 aa17.8■□□□□ 0.44
CACNA1A-259ENST00000638114 MTF1Q14872 753 aa17.8■□□□□ 0.44
CACNA1A-259ENST00000638114 KRT39Q6A163 491 aa17.8■□□□□ 0.44
CACNA1A-259ENST00000638114 TRIM68Q6AZZ1 485 aa17.8■□□□□ 0.44
CACNA1A-259ENST00000638114 ISM2Q6H9L7 571 aa17.8■□□□□ 0.44
CACNA1A-259ENST00000638114 ZC3H14Q6PJT7 736 aaKnown RBP17.8■□□□□ 0.44
CACNA1A-259ENST00000638114 TXNDC11Q6PKC3 985 aa17.8■□□□□ 0.44
CACNA1A-259ENST00000638114 UNC93AQ86WB7 457 aa17.8■□□□□ 0.44
CACNA1A-259ENST00000638114 SMARCD1Q96GM5 515 aa17.8■□□□□ 0.44
CACNA1A-259ENST00000638114 FAM83CQ9BQN1 747 aa17.8■□□□□ 0.44
CACNA1A-259ENST00000638114 NIF3L1Q9GZT8 377 aa17.8■□□□□ 0.44
CACNA1A-259ENST00000638114 CHRDQ9H2X0 955 aa17.8■□□□□ 0.44
CACNA1A-259ENST00000638114 EBF3Q9H4W6 596 aa17.8■□□□□ 0.44
CACNA1A-259ENST00000638114 DMAP1Q9NPF5 467 aaPredicted RBP17.8■□□□□ 0.44
CACNA1A-259ENST00000638114 HPS4Q9NQG7 708 aa17.8■□□□□ 0.44
CACNA1A-259ENST00000638114 GCNT4Q9P109 453 aa17.8■□□□□ 0.44
CACNA1A-259ENST00000638114 FBXO4Q9UKT5 387 aa17.8■□□□□ 0.44
CACNA1A-259ENST00000638114 VPS13AQ96RL7 3174 aa17.8■□□□□ 0.44
CACNA1A-259ENST00000638114 STX10O60499 249 aa17.79■□□□□ 0.44
CACNA1A-259ENST00000638114 GADD45BO75293 160 aaPredicted RBP17.79■□□□□ 0.44
CACNA1A-259ENST00000638114 AP1G2O75843 785 aa17.79■□□□□ 0.44
CACNA1A-259ENST00000638114 CHRNB1P11230 501 aa17.79■□□□□ 0.44
CACNA1A-259ENST00000638114 CCDC130P13994 396 aa17.79■□□□□ 0.44
CACNA1A-259ENST00000638114 TRIM21P19474 475 aaKnown RBP17.79■□□□□ 0.44
CACNA1A-259ENST00000638114 PPP3CCP48454 512 aa17.79■□□□□ 0.44
CACNA1A-259ENST00000638114 MXI1P50539 228 aa17.79■□□□□ 0.44
CACNA1A-259ENST00000638114 PMS1P54277 932 aaKnown RBP17.79■□□□□ 0.44
CACNA1A-259ENST00000638114 TAF10Q12962 218 aa17.79■□□□□ 0.44
CACNA1A-259ENST00000638114 USP4Q13107 963 aa17.79■□□□□ 0.44
CACNA1A-259ENST00000638114 STIM1Q13586 685 aa17.79■□□□□ 0.44
CACNA1A-259ENST00000638114 RUNX3Q13761 415 aa17.79■□□□□ 0.44
CACNA1A-259ENST00000638114 LRRC32Q14392 662 aa17.79■□□□□ 0.44
CACNA1A-259ENST00000638114 PON2Q15165 354 aa17.79■□□□□ 0.44
CACNA1A-259ENST00000638114 ZNF77Q15935 545 aa17.79■□□□□ 0.44
CACNA1A-259ENST00000638114 DCAF17Q5H9S7 520 aaPredicted RBP17.79■□□□□ 0.44
CACNA1A-259ENST00000638114 TCERG1LQ5VWI1 586 aa17.79■□□□□ 0.44
CACNA1A-259ENST00000638114 ANKRD40Q6AI12 368 aa17.79■□□□□ 0.44
CACNA1A-259ENST00000638114 PAQR9Q6ZVX9 377 aa17.79■□□□□ 0.44
CACNA1A-259ENST00000638114 FUKQ8N0W3 1084 aa17.79■□□□□ 0.44
CACNA1A-259ENST00000638114 NUP93Q8N1F7 819 aa17.79■□□□□ 0.44
CACNA1A-259ENST00000638114 SH3RF2Q8TEC5 729 aa17.79■□□□□ 0.44
CACNA1A-259ENST00000638114 SLITRK1Q96PX8 696 aa17.79■□□□□ 0.44
CACNA1A-259ENST00000638114 KCNK16Q96T55 309 aa17.79■□□□□ 0.44
CACNA1A-259ENST00000638114 CYP3A43Q9HB55 503 aa17.79■□□□□ 0.44
CACNA1A-259ENST00000638114 APOBEC3GQ9HC16 384 aaKnown RBP17.79■□□□□ 0.44
CACNA1A-259ENST00000638114 KRT82Q9NSB4 513 aa17.79■□□□□ 0.44
CACNA1A-259ENST00000638114 RBM12Q9NTZ6 932 aaKnown RBP17.79■□□□□ 0.44
CACNA1A-259ENST00000638114 FAM49BQ9NUQ9 324 aa17.79■□□□□ 0.44
CACNA1A-259ENST00000638114 DMDP11532 3685 aa17.79■□□□□ 0.44
CACNA1A-259ENST00000638114 TRIM49BA6NDI0 452 aa17.78■□□□□ 0.44
CACNA1A-259ENST00000638114 ZNF840PA6NDX5 716 aa17.78■□□□□ 0.44
CACNA1A-259ENST00000638114 SLC16A3O15427 465 aaKnown RBP17.78■□□□□ 0.44
CACNA1A-259ENST00000638114 RTN3O95197 1032 aaPredicted RBP17.78■□□□□ 0.44
CACNA1A-259ENST00000638114 ARSAP15289 507 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms