RNA–Protein interactions for RNA: ENST00000637985.1

CLN3-264, Transcript of CLN3, battenin, humanhuman

TSL 5

Gene CLN3, Length 764 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN3-264ENST00000637985 MYH11P35749 1972 aa17.57■□□□□ 0.4
CLN3-264ENST00000637985 HELZP42694 1942 aaKnown RBP17.57■□□□□ 0.4
CLN3-264ENST00000637985 GOLGA4Q13439 2230 aaKnown RBP17.56■□□□□ 0.4
CLN3-264ENST00000637985 SCN1AP35498 2009 aa17.56■□□□□ 0.4
CLN3-264ENST00000637985 A0A0A0MRY4 1105 aa17.56■□□□□ 0.4
CLN3-264ENST00000637985 VWA3AA6NCI4 1184 aa17.56■□□□□ 0.4
CLN3-264ENST00000637985 SLC26A4O43511 780 aa17.56■□□□□ 0.4
CLN3-264ENST00000637985 NOL4O94818 638 aa17.56■□□□□ 0.4
CLN3-264ENST00000637985 TIE1P35590 1138 aa17.56■□□□□ 0.4
CLN3-264ENST00000637985 KIR2DL1P43626 348 aaPredicted RBP17.56■□□□□ 0.4
CLN3-264ENST00000637985 MESP2Q0VG99 397 aa17.56■□□□□ 0.4
CLN3-264ENST00000637985 EMC10Q5UCC4 262 aa17.56■□□□□ 0.4
CLN3-264ENST00000637985 SLC36A4Q6YBV0 504 aa17.56■□□□□ 0.4
CLN3-264ENST00000637985 KCNK18Q7Z418 384 aa17.56■□□□□ 0.4
CLN3-264ENST00000637985 BRAPQ7Z569 592 aa17.56■□□□□ 0.4
CLN3-264ENST00000637985 THEM5Q8N1Q8 247 aa17.56■□□□□ 0.4
CLN3-264ENST00000637985 PGBD3Q8N328 593 aa17.56■□□□□ 0.4
CLN3-264ENST00000637985 LRRC15Q8TF66 581 aa17.56■□□□□ 0.4
CLN3-264ENST00000637985 TRMT2BQ96GJ1 504 aaKnown RBP17.56■□□□□ 0.4
CLN3-264ENST00000637985 AK8Q96MA6 479 aa17.56■□□□□ 0.4
CLN3-264ENST00000637985 UXTQ9UBK9 157 aaPredicted RBP17.56■□□□□ 0.4
CLN3-264ENST00000637985 PCDHB5Q9Y5E4 795 aa17.56■□□□□ 0.4
CLN3-264ENST00000637985 ANAPC1Q9H1A4 1944 aa17.56■□□□□ 0.4
CLN3-264ENST00000637985 A0A1W2PQD8 194 aa17.55■□□□□ 0.4
CLN3-264ENST00000637985 TCRBV21S2A2A0A5A6 115 aa17.55■□□□□ 0.4
CLN3-264ENST00000637985 ANO9A1A5B4 782 aa17.55■□□□□ 0.4
CLN3-264ENST00000637985 ATXN7O15265 892 aaPredicted RBP17.55■□□□□ 0.4
CLN3-264ENST00000637985 BMP15O95972 392 aa17.55■□□□□ 0.4
CLN3-264ENST00000637985 GUCY2CP25092 1073 aa17.55■□□□□ 0.4
CLN3-264ENST00000637985 CYP4F3Q08477 520 aa17.55■□□□□ 0.4
CLN3-264ENST00000637985 CUL4AQ13619 759 aa17.55■□□□□ 0.4
CLN3-264ENST00000637985 ZRSR1Q15695 479 aaKnown RBP17.55■□□□□ 0.4
CLN3-264ENST00000637985 ENOX2Q16206 610 aaKnown RBP17.55■□□□□ 0.4
CLN3-264ENST00000637985 ZC2HC1CQ53FD0 456 aaPredicted RBP17.55■□□□□ 0.4
CLN3-264ENST00000637985 SDHAF4Q5VUM1 108 aa17.55■□□□□ 0.4
CLN3-264ENST00000637985 METTL23Q86XA0 190 aa17.55■□□□□ 0.4
CLN3-264ENST00000637985 DCP1BQ8IZD4 617 aaKnown RBP17.55■□□□□ 0.4
CLN3-264ENST00000637985 ARL14EPQ8N8R7 260 aaPredicted RBP17.55■□□□□ 0.4
CLN3-264ENST00000637985 TMEM161BQ8NDZ6 487 aa17.55■□□□□ 0.4
CLN3-264ENST00000637985 SPIRE2Q8WWL2 714 aa17.55■□□□□ 0.4
CLN3-264ENST00000637985 PNMA5Q96PV4 448 aa17.55■□□□□ 0.4
CLN3-264ENST00000637985 RUSC1Q9BVN2 902 aa17.55■□□□□ 0.4
CLN3-264ENST00000637985 TMLHEQ9NVH6 421 aa17.55■□□□□ 0.4
CLN3-264ENST00000637985 KCND2Q9NZV8 630 aa17.55■□□□□ 0.4
CLN3-264ENST00000637985 ARHGAP26Q9UNA1 814 aa17.55■□□□□ 0.4
CLN3-264ENST00000637985 MYMKA6NI61 221 aa17.54■□□□□ 0.4
CLN3-264ENST00000637985 SFI1A8K8P3 1242 aa17.54■□□□□ 0.4
CLN3-264ENST00000637985 CYB561D2O14569 222 aa17.54■□□□□ 0.4
CLN3-264ENST00000637985 FAM189A1O60320 539 aa17.54■□□□□ 0.4
CLN3-264ENST00000637985 PRPF40AO75400 957 aaKnown RBP17.54■□□□□ 0.4
CLN3-264ENST00000637985 KAT7O95251 611 aa17.54■□□□□ 0.4
CLN3-264ENST00000637985 MAPTP10636 758 aaKnown RBP17.54■□□□□ 0.4
CLN3-264ENST00000637985 PDCP20941 246 aa17.54■□□□□ 0.4
CLN3-264ENST00000637985 SLC6A11P48066 632 aa17.54■□□□□ 0.4
CLN3-264ENST00000637985 KYAT1Q16773 422 aa17.54■□□□□ 0.4
CLN3-264ENST00000637985 WSCD1Q658N2 575 aa17.54■□□□□ 0.4
CLN3-264ENST00000637985 ZNF605Q86T29 641 aa17.54■□□□□ 0.4
CLN3-264ENST00000637985 SLC41A1Q8IVJ1 513 aa17.54■□□□□ 0.4
CLN3-264ENST00000637985 SYT2Q8N9I0 419 aaPredicted RBP17.54■□□□□ 0.4
CLN3-264ENST00000637985 CDK5RAP3Q96JB5 506 aa17.54■□□□□ 0.4
CLN3-264ENST00000637985 PNKPQ96T60 521 aa17.54■□□□□ 0.4
CLN3-264ENST00000637985 PI4K2AQ9BTU6 479 aa17.54■□□□□ 0.4
CLN3-264ENST00000637985 PCOLCE2Q9UKZ9 415 aa17.54■□□□□ 0.4
CLN3-264ENST00000637985 RAI2Q9Y5P3 530 aa17.54■□□□□ 0.4
CLN3-264ENST00000637985 TRABD2BA6NFA1 517 aa17.53■□□□□ 0.4
CLN3-264ENST00000637985 DKK1O94907 266 aa17.53■□□□□ 0.4
CLN3-264ENST00000637985 CYP17A1P05093 508 aa17.53■□□□□ 0.4
CLN3-264ENST00000637985 EIF2DP41214 584 aaKnown RBP17.53■□□□□ 0.4
CLN3-264ENST00000637985 MATR3P43243 847 aaKnown RBP eCLIP17.53■□□□□ 0.4
CLN3-264ENST00000637985 ZXDBP98169 803 aa17.53■□□□□ 0.4
CLN3-264ENST00000637985 DDR2Q16832 855 aa17.53■□□□□ 0.4
CLN3-264ENST00000637985 PLEKHG6Q3KR16 790 aa17.53■□□□□ 0.4
CLN3-264ENST00000637985 JADE1Q6IE81 842 aa17.53■□□□□ 0.4
CLN3-264ENST00000637985 ADGRG2Q8IZP9 1017 aa17.53■□□□□ 0.4
CLN3-264ENST00000637985 SPATA18Q8TC71 538 aa17.53■□□□□ 0.4
CLN3-264ENST00000637985 RPF1Q9H9Y2 349 aaKnown RBP17.53■□□□□ 0.4
CLN3-264ENST00000637985 ZDHHC4Q9NPG8 344 aa17.53■□□□□ 0.4
CLN3-264ENST00000637985 C2orf78A6NCI8 922 aa17.52■□□□□ 0.4
CLN3-264ENST00000637985 APODP05090 189 aa17.52■□□□□ 0.4
CLN3-264ENST00000637985 PLA2G4BP0C869 781 aa17.52■□□□□ 0.4
CLN3-264ENST00000637985 GABRG2P18507 467 aa17.52■□□□□ 0.4
CLN3-264ENST00000637985 HDCP19113 662 aa17.52■□□□□ 0.4
CLN3-264ENST00000637985 SMTNP53814 917 aa17.52■□□□□ 0.4
CLN3-264ENST00000637985 SLC12A3P55017 1021 aa17.52■□□□□ 0.4
CLN3-264ENST00000637985 CAMK2BQ13554 666 aa17.52■□□□□ 0.4
CLN3-264ENST00000637985 NFE2Q16621 373 aaPredicted RBP17.52■□□□□ 0.4
CLN3-264ENST00000637985 TMEM119Q4V9L6 283 aa17.52■□□□□ 0.4
CLN3-264ENST00000637985 TRIML1Q8N9V2 468 aa17.52■□□□□ 0.4
CLN3-264ENST00000637985 LSM14AQ8ND56 463 aaKnown RBP17.52■□□□□ 0.4
CLN3-264ENST00000637985 CALML4Q96GE6 196 aa17.52■□□□□ 0.4
CLN3-264ENST00000637985 PYM1Q9BRP8 204 aaKnown RBP17.52■□□□□ 0.4
CLN3-264ENST00000637985 CCSER1Q9C0I3 900 aa17.52■□□□□ 0.4
CLN3-264ENST00000637985 FAM124BQ9H5Z6 455 aaPredicted RBP17.52■□□□□ 0.4
CLN3-264ENST00000637985 TOR4AQ9NXH8 423 aa17.52■□□□□ 0.4
CLN3-264ENST00000637985 MYOFQ9NZM1 2061 aa17.51■□□□□ 0.39
CLN3-264ENST00000637985 IGHV1OR15-9A0A0B4J2B8 117 aa17.51■□□□□ 0.39
CLN3-264ENST00000637985 NFICP08651 508 aa17.51■□□□□ 0.39
CLN3-264ENST00000637985 PLS3P13797 630 aa17.51■□□□□ 0.39
CLN3-264ENST00000637985 LONP1P36776 959 aaKnown RBP17.51■□□□□ 0.39
CLN3-264ENST00000637985 UBA7P41226 1012 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms